KEGG   Gossypium arboreum (tree cotton): 108461382
Entry
108461382         CDS       T05776                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab03020  RNA polymerase
gab03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gab00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108461382
  09124 Replication and repair
   03420 Nucleotide excision repair
    108461382
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gab03021]
    108461382
   03400 DNA repair and recombination proteins [BR:gab03400]
    108461382
Transcription machinery [BR:gab03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     108461382
  RNA polymerase III system
   RNA polymerase III
     108461382
  RNA polymerase I system
   RNA polymerase I
     108461382
DNA repair and recombination proteins [BR:gab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      108461382
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 108461382
NCBI-ProteinID: XP_017616707
LinkDB
Position
13:complement(66858207..66860966)
AA seq 145 aa
MSNLILFEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNTEIYPMHVGDKFTMA
LAHTLNLDGTPDTGYFNPGRKSLADKYEYVMHGKLYKISDDSSGKGLKAEIYVSYGGLLM
LLRGEASHVSHFELDQRLFLLIRKL
NT seq 438 nt   +upstreamnt  +downstreamnt
atgtcaaacttaatactttttgaggatatttttgttgttgataagcttgacccagatggg
aaaaagtttgataaagttacccgcattgaagcacggagccagaactgtgatatgttcatg
cacctcgatgtaaatacagagatatatcctatgcatgttggtgataaattcacaatggcg
ttagctcacacgttgaatttggatgggacgcctgatactggctatttcaatccggggagg
aagtctcttgcagataagtatgagtatgtcatgcatgggaagttatacaagatatcagat
gattcttcagggaaaggacttaaagcggagatctatgtatcatatggtgggcttttaatg
ctattgaggggagaagcttctcatgtctcccactttgaacttgaccagaggctatttctt
ctcataaggaagctctaa

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