Gossypium arboreum (tree cotton): 108463671
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Entry
108463671 CDS
T05776
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab00040
Pentose and glucuronate interconversions
gab01100
Metabolic pathways
Module
gab_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108463671
Enzymes [BR:
gab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
108463671
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
CsgH
Motif
Other DBs
NCBI-GeneID:
108463671
NCBI-ProteinID:
XP_017619055
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Position
13:complement(106656445..106657949)
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AA seq
412 aa
AA seq
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MAIQFNFVSSILILVLLSISSVEGQGGEGGAVIDVVAKFGAKADEKTNLSKPLLDAWKEA
CALTSPSKIVIPKGIYFLSTATLDGPCKAPIELQVQGTVKASTDPGAFKEPKWIAFNRIE
NFKLSGGGVFDGQGTTAYKREGCKGHDYCGSLPINLRFDFLTNAMIQDITTKDSKQFQAN
VLGCKNITFEHFTVSAPDKSPNTDGIDIRRSDGVNVLYSVIKTGDDCVSIGDGSKNLVIN
GVTCGPGHGISIGSLGLFKNEEPVDGVTVKNCTMTNTSNGVRIKTCPGAEPGTCSNIHFE
DITVANVSFPIIIDQKYCPWNKCKIDEESKVKLSNISFKNIHGTSGRPEAVKIICSATLP
CENVELADIEITHSGPTGPAVSQCSNVKPKVSGKQNPAACSAPIPAKPTPTA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggctattcaatttaattttgtttcatccatcttaatactagtacttctgtccatatca
tctgttgaaggtcaaggaggagaaggtggtgctgttattgatgttgttgcaaagtttggt
gcaaaggcagacgagaaaacaaatttgagtaagccattgttggatgcttggaaagaagca
tgtgctttgacatctccgtcaaaaattgtgattcctaaagggatatattttttaagtaca
gctaccttagatggtccttgcaaggctcctattgagcttcaagttcaaggcactgtgaag
gcttcgacagaccctggtgctttcaaggagcctaaatggattgctttcaatagaattgaa
aatttcaaattgtctggcggaggagttttcgacggccagggaaccactgcttataaaagg
gaaggttgcaaaggtcatgattattgtggttcacttcctattaacctaaggtttgatttt
ttaaccaacgcaatgatacaagatataactaccaaagacagcaagcagttccaggctaat
gttctaggatgcaaaaacattactttcgaacatttcacggtatctgcacctgacaaaagc
ccaaacacagatgggattgacattaggagatcagatggggtcaatgttctttactcggtg
ataaaaactggtgatgattgtgtttcaattggggatggttctaaaaatttggttatcaat
ggagtaacttgtggaccaggacatggcatcagtattggcagtctcggattgtttaaaaat
gaagaaccagttgatggagttacagtaaaaaattgcaccatgactaatacttccaatggt
gttagaatcaaaacttgcccaggtgctgaacctggcacttgttcgaacattcactttgag
gatattaccgtggccaatgtcagttttcctattataattgatcaaaaatattgcccatgg
aacaaatgcaaaatagatgaagaatcaaaagttaaactaagcaacattagtttcaaaaac
attcacggcacttctgggcgtccagaagctgtcaagattatttgtagtgctactttgcct
tgtgaaaatgtggaacttgcagacattgaaattacgcacagtggaccgactggacctgca
gtatcacaatgttcgaatgtgaagcctaaagttagtggcaaacaaaatccagctgcatgt
tctgcccctatcccagcaaaacctaccccgactgcttaa
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