KEGG   Gossypium arboreum (tree cotton): 108463671
Entry
108463671         CDS       T05776                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
gab  Gossypium arboreum (tree cotton)
Pathway
gab00040  Pentose and glucuronate interconversions
gab01100  Metabolic pathways
Module
gab_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:gab00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    108463671
Enzymes [BR:gab01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     108463671
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 CsgH
Other DBs
NCBI-GeneID: 108463671
NCBI-ProteinID: XP_017619055
LinkDB
Position
13:complement(106656445..106657949)
AA seq 412 aa
MAIQFNFVSSILILVLLSISSVEGQGGEGGAVIDVVAKFGAKADEKTNLSKPLLDAWKEA
CALTSPSKIVIPKGIYFLSTATLDGPCKAPIELQVQGTVKASTDPGAFKEPKWIAFNRIE
NFKLSGGGVFDGQGTTAYKREGCKGHDYCGSLPINLRFDFLTNAMIQDITTKDSKQFQAN
VLGCKNITFEHFTVSAPDKSPNTDGIDIRRSDGVNVLYSVIKTGDDCVSIGDGSKNLVIN
GVTCGPGHGISIGSLGLFKNEEPVDGVTVKNCTMTNTSNGVRIKTCPGAEPGTCSNIHFE
DITVANVSFPIIIDQKYCPWNKCKIDEESKVKLSNISFKNIHGTSGRPEAVKIICSATLP
CENVELADIEITHSGPTGPAVSQCSNVKPKVSGKQNPAACSAPIPAKPTPTA
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggctattcaatttaattttgtttcatccatcttaatactagtacttctgtccatatca
tctgttgaaggtcaaggaggagaaggtggtgctgttattgatgttgttgcaaagtttggt
gcaaaggcagacgagaaaacaaatttgagtaagccattgttggatgcttggaaagaagca
tgtgctttgacatctccgtcaaaaattgtgattcctaaagggatatattttttaagtaca
gctaccttagatggtccttgcaaggctcctattgagcttcaagttcaaggcactgtgaag
gcttcgacagaccctggtgctttcaaggagcctaaatggattgctttcaatagaattgaa
aatttcaaattgtctggcggaggagttttcgacggccagggaaccactgcttataaaagg
gaaggttgcaaaggtcatgattattgtggttcacttcctattaacctaaggtttgatttt
ttaaccaacgcaatgatacaagatataactaccaaagacagcaagcagttccaggctaat
gttctaggatgcaaaaacattactttcgaacatttcacggtatctgcacctgacaaaagc
ccaaacacagatgggattgacattaggagatcagatggggtcaatgttctttactcggtg
ataaaaactggtgatgattgtgtttcaattggggatggttctaaaaatttggttatcaat
ggagtaacttgtggaccaggacatggcatcagtattggcagtctcggattgtttaaaaat
gaagaaccagttgatggagttacagtaaaaaattgcaccatgactaatacttccaatggt
gttagaatcaaaacttgcccaggtgctgaacctggcacttgttcgaacattcactttgag
gatattaccgtggccaatgtcagttttcctattataattgatcaaaaatattgcccatgg
aacaaatgcaaaatagatgaagaatcaaaagttaaactaagcaacattagtttcaaaaac
attcacggcacttctgggcgtccagaagctgtcaagattatttgtagtgctactttgcct
tgtgaaaatgtggaacttgcagacattgaaattacgcacagtggaccgactggacctgca
gtatcacaatgttcgaatgtgaagcctaaagttagtggcaaacaaaatccagctgcatgt
tctgcccctatcccagcaaaacctaccccgactgcttaa

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