Gossypium arboreum (tree cotton): 108464346
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Entry
108464346 CDS
T05776
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108464346
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gab01009
]
108464346
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gab03019
]
108464346
03036 Chromosome and associated proteins [BR:
gab03036
]
108464346
Protein phosphatases and associated proteins [BR:
gab01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
108464346
Messenger RNA biogenesis [BR:
gab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
108464346
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
108464346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
Vac14_Fab1_bd
PDS5
Htt_N-HEAT_1
HEAT_EZ
Adaptin_N
CLASP_N
TAF6_C
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
108464346
NCBI-ProteinID:
XP_017620097
LinkDB
All DBs
Position
13:complement(52919227..52925844)
Genome browser
AA seq
587 aa
AA seq
DB search
MSTVEAPLYPIAVLIDELKNDDIQLRLNSIRRLSTIARALGEDRTRSELIPFLSENNDDD
DEVLLAMAEELGVFVPYVGGVEHAHVLLTPLETLCTVEETCVRDKAVESLCKIGSQMREN
DLIERFTPLVKRLAAGEWFTARVSACGLFHIAYPSAPETLKTELRSIYGQLCQDDMPMVR
RSAASNLWKFAGTVESAHLKADIMQMFEDLTQDDQDTVRLLAVEGCAALGKLLEPQDCAA
RILPVIVNFSQDKSWRVRYMVANQLYELCEALGPEPIRTDLLPAYVRLLRDNEAEVRIAA
AGKVTKFCQILSPELAIQHILPCVKELSLDSSQHVRAALASVVMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLANQLGVGFFDDKLGGLCMQWLQDKVYSIRDAAAKNLKHLAEEFGPDWAMQHIIPQV
LEIANDSHYLHRMTLLRAISLLGPVMGSEITCSKLLPVVVNASKDRVPNIKFNVAKVLQS
LISVVDQSVVEKTIRPCLVELSEDPDVDVRYFAVQGLQSIDQVTMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtctacggttgaagcaccactgtatccaatagctgtcctgatagatgagctaaaaaat
gacgatatccaacttcgtttaaactcgatccgtaggctttcgacaattgcacgtgctctc
ggggaagatcgaaccaggtcggaattaattccatttctcagtgaaaacaatgatgatgac
gatgaggtgcttcttgcaatggctgaggagctgggagtgtttgttccctatgtcgggggt
gttgagcatgcccatgttttgctgacgcctttggaaaccctttgcactgttgaggaaacc
tgtgtaagggacaaagctgttgagtcattatgcaaaattggatctcagatgagggagaat
gatttgattgagcggtttactcctttagttaagaggctggctgctggagaatggtttaca
gctcgagtttcagcctgtgggctgtttcacattgcttatccaagtgcccctgagacgttg
aaaacagaattacggtctatatacggtcaactatgtcaagatgacatgcccatggtaaga
aggtctgctgcgtcaaatctgtggaaatttgctggaacagttgaatctgctcacttgaag
gctgacatcatgcaaatgtttgaggatcttacgcaagatgatcaagatacagttcgatta
ttggctgttgagggatgtgctgctcttggaaagttgttagagccccaggattgtgctgca
cgcattctccctgtaattgttaatttctcccaggataaatcttggcgtgtgcgttatatg
gttgcaaatcaattatatgaactttgtgaagctctgggaccagagcctattaggactgat
ttgcttcctgcatatgtgcggttacttcgtgataatgaggctgaagttcgcattgcagct
gcaggaaaagtaactaaattttgtcaaattttgagtccagaacttgcaatccaacacatt
cttccatgtgttaaggaactgtcattggattcctcccagcatgtccgtgctgctttggct
tcagttgtgatgggaatggctcctgtccttgggaaggatgcaacaatcgagcagcttctt
ccaatatttctctcccttttgaaggatgaattccctgatgtgcggctcaacataattagc
aaacttgatcaagtgaatcaggttattgggattgatctattgtcccaatccttactacca
gccattgttgagctcgctgaggataggcattggagggttcgacttgcaataattgagtat
ataccattattggcaaatcagttaggggttgggttttttgatgataaacttggtggcctt
tgcatgcaatggttgcaggataaggtttactctattcgagatgcagctgctaaaaattta
aagcatcttgctgaagaattcggcccagattgggcgatgcagcatattattccacaggta
ctagagatagctaatgattcacactatcttcatcggatgacccttcttcgtgccatttct
ctccttggtcctgttatgggctcagaaataacatgttctaaactgttgccagttgttgtc
aatgcatcaaaagacagggttcccaatattaagtttaatgttgcgaaggttttgcagtct
ctgatttcagtagttgatcagtctgtggtggagaagacaatacgtccatgcttggtagag
ctgagcgaggacccagatgttgatgtccgttattttgcagtccaaggacttcagtcaatc
gatcaggtcaccatgtcaagctag
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