Gossypium arboreum (tree cotton): 108466690
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Entry
108466690 CDS
T05776
Name
(RefSeq) ABC transporter D family member 1-like
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab02010
ABC transporters
gab04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108466690
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108466690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gab02000
]
108466690
Enzymes [BR:
gab01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
108466690
Transporters [BR:
gab02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
108466690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_23
SMC_N
AAA_16
nSTAND1
FtsK_SpoIIIE
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
108466690
NCBI-ProteinID:
XP_017622553
LinkDB
All DBs
Position
2:complement(1491284..1501985)
Genome browser
AA seq
1335 aa
AA seq
DB search
MPSLQLLQLTEHGRNLLASRRKTLLLGSGIVAAGGAVAYLQSRFSSKKPDSHGHYNGTRD
KRENSDKVLKKSNNVKRTRKKKGGLKSLQVLVAFLLSKMGKVGARELLALVGTVVLRTAL
SNRLAKVQGFLFRAVFLQNVPSFFRLISENILLSFLLSTIHSTSKYITGILSLRFRKILT
KLIHAHYFENMAYYKISHVDGRVRNPEQQIASDIPRFCSELSELLLDDLTAVTDSLVYTW
SLCSYAGPKYFFWILGFILGAGAGIKNFSPAFGKLTSKEQQLEGEYRQLHSRLRVHAESI
AFYGGESREESYIQQKFKTLVRHLRVVLHDHWWFGMIQDFLLKYLAATFVVVLIIEPFFA
GHLRPDSSILGRAEMFSNLRYHIGVVIPLFLALGTLSISSRRVNRLSGYADRIHELMLIS
RELSADDKKASLQKAGSMNYLTEANFVEFSRVKVVTPTGNVLVKDLSLRVESGSNLLITG
PNGSGKSSLFRVLGGLWPLVSGHIVKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLT
AHQEVEPLTHSGLVELLKNVDLEYLLDRYPPEKEVNWGDELSLGEQQKLGMARLFYHKPK
FAILDECTSAVTTDMEERFCAKIRAMGTSCITISHRPALVAFHDVVLSLDGEGGWKVHYK
REDSSLESEGGMDLTKLSVTDRQNDAITVQRAFTAAKKDFAFSNPKTQPYVSELIAASPS
LSHDVKLPVVPQLQKTPRVLSSRVAAMFKVLVPTVFDKQGAQLLAVAFLVATRTWLSDQI
ATLNGTTVKYVLKQDKAGFIRLMSISVLQSAASAVIAPSLRHLTATLALGWRIRLTQHLQ
KNYLRNNAFYQVFQMSSKNIDADQRITDDLEKLTTDLSGLVTGMVKPSVDILWFTWRMKL
LTGRRGVSILYAYMLLGLGLLRTATPDFGDLTCREQQLEGTFRFMHERLRTHAESIAFFG
GGAREKAMVESRFRDLLDHSSLLLKKKWQFGILDDFVTKQFPHIVTWGLSLLYTLDHKGD
RSLVSTQIELGHGIRFLASVVSQSFLAFGDIMELNRKFLELSGSINRVFELEELVDAVQT
DKVLQSHGNDLYAEDVISFCDVDIVTPSEKLLARQLTCDVVPGKNLLVTGPNGSGKSSIF
RVLRGLWPVMSGRLYKPSHHLDKEDISCCGVFYVPQKPYTCLGTLRDQIIYPLSHEEAEQ
KELKLYGKGKSSADTTNILDARLKNILENVRLNYLLERDESGWDANLSWEDILSLGEQQR
LGMARLFFHKPKFGILDECTNATSVDVEEQLYRLAKHLGITVITSSQRPALIPFHALELR
FVDGEGNWELRFIEQ
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgccatctcttcaactgttgcagttaaccgagcatggccgaaatcttctggcctctagg
aggaagacactactgcttggttctggtattgtggctgctggtggagctgttgcttattta
caatcacggtttagtagtaaaaagcctgattcacatggtcattacaatgggacccgagat
aaaagagaaaattcagataaggtccttaaaaagagtaataatgtaaagagaactagaaaa
aagaaaggtggattaaagtcccttcaggttttagtagcatttcttttatccaagatgggc
aaagttggtgcaagagagcttttggctttggtgggcactgtggtgctgagaacggctttg
agcaatagattagcaaaagttcagggatttctattccgtgctgtttttctccagaatgta
ccatcattcttccggctaatctctgaaaatattcttttgagctttcttctgtcaaccatt
cattctacttcaaagtacataactggtatcctaagtctgaggttcaggaaaatactgacg
aaactcatccatgcacattactttgagaacatggcatattacaaaatatcacacgttgat
ggacgggtacggaatcctgagcaacagattgctagtgacataccaagattctgttcggag
ttaagtgagcttttactggatgatttgacagcagttactgacagtcttgtttatacttgg
tctctttgttcttatgctggcccaaaatactttttctggatattgggatttattctggga
gcaggagctggcataaaaaacttctctcctgcttttgggaaactaacgtcaaaagaacaa
cagttggaaggagaatacagacagcttcattcaaggttaagggtccatgcagaaagtata
gcattttacggtggagaaagtagagaagagtcttatattcaacagaagtttaagactctt
gttaggcacttgagggttgtacttcatgaccattggtggtttggcatgattcaagatttc
ttattgaagtatcttgctgccacttttgtagttgtcttgattattgagcctttctttgct
ggccatcttagacctgactcttcaatattgggacgggcagagatgtttagcaatttaaga
tatcacatcggtgttgtaattccactatttttggccctgggtaccctttctataagttca
agacgggtaaatcgtctcagtggttatgctgaccgtattcatgagctaatgcttatatca
agagagctaagtgctgatgataaaaaagcatccctgcaaaaagctggaagtatgaattac
ctaactgaagctaactttgttgagttttcccgtgtcaaggttgtcactccaaccgggaat
gttttggtgaaggatctctctctgagggttgaatcaggatctaatcttttaattacaggt
ccaaatggcagtgggaagagttcccttttccgggttttaggtggcctttggccactggta
tctggccatattgtgaaacctggagttggttctgatcttaataaagaaatattctatgtg
ccacaaagaccatatacagctgttggaacccttcgcgaccagttaatctatcctcttaca
gcacatcaggaggttgagcctcttacacatagtggattggtggagctgttgaaaaatgtt
gaccttgagtacctattggatcgttacccacctgagaaagaggttaactggggagatgaa
ctctctcttggggagcaacagaaattgggaatggctagactgttctaccataagcctaaa
tttgcaattcttgatgagtgcacaagtgctgtgacaactgatatggaggaaaggttttgt
gctaaaattagagccatgggtacatcatgcataaccatatcacatcgtccagcactagtg
gcattccatgatgtggttttgtccttggatggggaaggaggatggaaagttcattacaaa
agagaggattcctcgttagaaagtgaaggtgggatggatttgactaaactttctgtgaca
gaccgccaaaatgatgcaatcactgttcaacgggcattcactgcagctaaaaaggacttt
gcattctcaaatccaaagactcaaccatatgtatcagagctcatagcagcatcaccctct
ttgagtcatgatgttaagttacctgtggttcctcaactccagaagactccaagagtactg
tcttcaagggtagctgccatgtttaaagtactggtacctaccgtatttgacaaacaaggg
gctcaactacttgccgttgcttttcttgttgccacaagaacatggttatcagatcagatt
gcgacattaaatggaactactgtgaagtatgttttgaagcaggataaagcaggatttata
cgattaatgagtataagtgtccttcaaagtgctgcatctgctgtcattgctccttccttg
aggcacttgacagctaccctcgcccttggatggaggattagattgactcaacatttgcag
aagaactacttaagaaataatgcattttaccaggtctttcaaatgtcgagcaaaaatatt
gatgcagatcaaagaattactgatgatcttgaaaagttaacaactgatttatcggggttg
gttaccggaatggtaaagccatctgttgacattttgtggttcacatggagaatgaagcta
ttaacaggaagaaggggcgttagcattttgtatgcatacatgttgcttggtctgggtttg
ctaaggactgctactcctgattttggtgatttgacatgtcgagaacaacaacttgaggga
acctttaggttcatgcacgaaagactgcggactcatgctgagtctattgctttctttgga
ggcggtgctcgagaaaaagctatggtcgagtcaaggtttagggatcttcttgatcactct
tcattacttttaaagaagaaatggcagttcggtatacttgacgattttgtcacaaaacaa
tttccacatatagttacctggggtttgagcttattatataccttagatcacaagggggac
cgatccttagtttctactcaaattgagcttggacatggcatacgattcctggcatctgtt
gtgtctcaaagctttttagcctttggtgacatcatggagttgaatagaaagttcctggag
ctatccggaagcataaaccgagtttttgagcttgaagagcttgttgatgctgttcagact
gataaggtgttgcagtctcatgggaatgatctctatgctgaagatgttatttctttttgc
gatgtcgatatagttactccatcagagaagctgttggctaggcagttgacatgtgatgta
gtacctggaaaaaacctgcttgttactggtccgaacgggagcgggaaaagttccatcttc
agagtacttcgaggtctatggcccgttatgagtggaaggctttataaaccatcacaccat
ttggacaaagaggatatttcctgttgtggcgtcttctatgttcctcagaaaccatataca
tgcttgggaactttaagggatcaaatcatatatccgctctctcatgaagaagcagagcag
aaggaattaaagttatatggaaaaggtaaaagctcagctgacaccacaaatattctcgat
gcacgtctgaaaaacattctcgaaaatgttcgattgaattatcttttggaaagggatgaa
agtggttgggatgctaatctcagttgggaagacatactttcacttggagaacagcaaaga
ttaggcatggcacggttattcttccacaagcctaaattcggcatcctagacgagtgcaca
aatgccacgagcgtcgacgttgaggaacaactttatagactggccaaacatttgggcata
actgttattacctcatcacagcggcctgctttaataccattccatgctttggagttgcga
tttgtcgatggtgagggtaactgggagcttcgctttatcgagcaatga
DBGET
integrated database retrieval system
