Gossypium arboreum (tree cotton): 108479178
Help
Entry
108479178 CDS
T05776
Name
(RefSeq) ABC transporter B family member 2-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
gab
Gossypium arboreum (tree cotton)
Pathway
gab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108479178
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gab02000
]
108479178
04147 Exosome [BR:
gab04147
]
108479178
04090 CD molecules [BR:
gab04090
]
108479178
Enzymes [BR:
gab01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
108479178
Transporters [BR:
gab02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
108479178
Exosome [BR:
gab04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
108479178
CD molecules [BR:
gab04090
]
Proteins
108479178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
Zeta_toxin
AAA_16
AAA_21
RsgA_GTPase
AAA_15
APS_kinase
AAA_30
nSTAND1
Motif
Other DBs
NCBI-GeneID:
108479178
NCBI-ProteinID:
XP_017637115
LinkDB
All DBs
Position
6:50348697..50355726
Genome browser
AA seq
1248 aa
AA seq
DB search
MTPSGSFNQDIDEDDTKKKEGKKKKDHKVPLLKLFSFADIYDYVLMGLGSIGACVHGASV
PVFFIFFGKLINVAGMAYLFPKEASHKVAKYSLDFVYLSVAILFSSWIEVACWMHTGERQ
AAKMRMAYLKSMLNQDIRLFDTEASTGQVISAITSDIILVQDALSEKVGNFMHYVSRFIV
GFCIGFARVWQISLVTLSIVPLIAIAGGLYAYVATGLIARVRNSYVKAGEIAEEVIGNVR
TVQAFAGEERAVKSYKEALMNTYKYGRRAGLAKGLGLGSMHCVLFVSWALLVWFTSIVVH
KNIADGGDSFTTMLNVVISGLSLGLAAPDISAFIRARVAAYPIFEMIERNTVSKTSSKTG
HKLGKVEGHIEFKDVSFNYPSRPDVVIFNRFSLNIPAGKIVALVGGSGSGKSTVISLIER
FYEPLAGEVLLDGNNVRDLDLKWLRHQIGLVNQEPALFATTIRENILYGKYDATLGEIAR
AAKLSGAITFINNLPDRFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALD
AESEKSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQSGKIVETGSHDELISNPNSA
YSSLVQLQETASLQRYPSQSPAMSTPRSLSYSRELSRTRTSFGASFRSDKDSVFSRLGAE
GIDTRKPVSPRRLYSMIGPDWYYGVFGTIAALIAGAQMPLFALGVSQALVSYYMDWETTC
NEVKKIATLFCCAAVITVIVHAIEHLCFGIMGERLTLRVREVMFSAILRNEIGWFDDPNN
ASSMLASHLESDATFLKGVVVDRTSILIQNLGLVVAAFIIAFILNWRITLVILATFPLII
SGHISEKLFMQGFGGDLSKAYLKANMLAGEAVSNIRTVAAFCAEEKIFDLYSRELVEPSK
RSFNRGQIAGIFYGISQFFIFSSYGLALWYGSILMGKELASFKSVMKSFMVLIITALAMG
ETLALIPDLLKGNQMVASVFEIMDRKTQVIGDVGEEVTNVEGTIELRGVHFSYPSRPDVV
IFKDFDLKVRSGKSMALVGQSGSGKSSVLVLILRFYDPTAGKVMIDGRDIRKLKLKSLRK
HIGLVQQEPALFATSIYENILYGKEGASESEIIEAAKLANAHGFISSLPEGYSTKVGERG
VQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMRNRTTVMVAHR
LSTIKNADQISVIQGGRIIEKGNHSSLIENKEGPYFKLINLQQQQHCS
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atgacaccttctggttcatttaaccaagatattgatgaggatgacacaaagaagaaagaa
ggaaagaagaagaaggatcacaaagttccattgttgaagttgttttcatttgcagacatt
tacgactatgtgctaatgggtttgggttccattggtgcatgcgtgcatggtgcatcggtt
cctgttttcttcatcttctttgggaaattgataaacgttgctggaatggcttatctcttc
cctaaagaagcttctcacaaagttgcaaagtactcattggattttgtatacctcagcgtg
gctattttattttcctcatggatagaggtggcttgttggatgcatactggagagcgacag
gcagcaaaaatgaggatggcatacctcaagtctatgctaaatcaagacatacgcttattt
gacactgaagcttcaacaggacaagtcatttccgccattacaagtgacattattcttgtt
caagatgctctttctgagaaggtggggaatttcatgcattacgtaagcaggtttatagta
ggtttctgcattggatttgcgagagtatggcaaatcagtttggtaacactgtcaattgtc
cccttgattgccattgctggtgggctttatgcttacgtagccacggggcttattgctaga
gttcgaaactcctacgtcaaggccggtgaaattgcggaagaggtgatcgggaatgttcga
acagtccaagcatttgcaggggaagaaagggcagtgaaatcatataaagaagcattgatg
aacacatacaagtacggcagaagagctggcttagccaagggccttggactgggctctatg
cattgcgtgcttttcgtttcctgggcgttgctcgtttggttcaccagtatagttgttcac
aagaacattgccgatggtggggattctttcactaccatgcttaatgttgtcatctccggc
ctgtcactaggactggcagctcccgacatctcagcgtttattcgagcaagggtggctgcg
tatccgatatttgagatgatagagaggaatacagttagcaaaaccagctccaaaacaggc
cacaaactaggcaaagtggagggtcacattgaattcaaggacgtgtcattcaattacccg
tctcgcccggatgtagtaatcttcaataggttcagcctcaacatacctgctggcaaaatt
gtagctcttgtgggaggaagtggctctgggaagagcacggtcatatcattgattgaaaga
ttttatgagccccttgcaggggaagttttgttggatgggaataatgtcagggaccttgat
ctcaaatggcttagacatcaaattggtttggttaatcaggagccagcacttttcgcaaca
acgattagggagaatatcctttacgggaaatatgatgctacactcggagagatagcacgt
gctgcgaaactttcgggggccattacgtttattaataatctccctgatagatttgagact
caggttggtgaaagaggaatacaactatcaggtggacagaagcaaagaattgcgatatct
cgagcaatagtgaagaatccatctatccttttacttgatgaagcaacaagtgcacttgat
gcggaatctgagaagagtgtgcaggaggcacttgaccgtgtgatggtgggacgaaccaca
gtcgtcgtggctcatcgactttctactattaggaatgcagacgtgatagctgttgttcaa
agtgggaagatagtagaaactggcagccatgatgagctcatttcaaatcctaacagtgcc
tactcttcactcgttcagcttcaagagacggcgtcacttcaacgatacccctcgcagagt
cctgcaatgagtacaccacgcagtttgagttattcacgagaattatcccgaacaaggaca
agctttggtgcaagttttcgttccgacaaggattccgtatttagccgtttaggtgctgaa
ggaatagatacaaggaagcctgtttcaccaagaagactatattctatgataggacctgac
tggtattatggggtgtttggaaccattgctgcattaattgctggagctcagatgcctctc
tttgctctaggggtttctcaagctctagtatcctattacatggactgggaaacaacatgc
aatgaagtgaagaaaattgccaccctattttgctgtgctgcagttataactgtcattgtt
catgcaattgagcacctatgtttcggtattatgggagagcgactcactctccgtgtgcgt
gaagtgatgttttctgccattttgaggaacgaaattggatggtttgacgacccaaacaac
gcaagttccatgctagcatcgcatctagagagtgatgcaacatttctaaaaggtgtagtt
gtcgatcggacatcaattctcatccagaatctaggcttggtcgttgctgccttcattatt
gctttcatcttaaactggagaatcacacttgttatcttggccactttcccattaatcata
agtggtcacattagcgagaaactattcatgcaaggctttggaggtgacttaagcaaagca
tatctaaaagcaaacatgctcgctggtgaggctgtcagcaatattagaactgtggctgca
ttttgtgctgaggagaagatctttgatctttattcccgtgagctggtagagccttcaaag
cgttcgttcaaccgtggtcaaattgcagggatattctacggcatttcccagttcttcatc
ttctcatcttatggccttgccttatggtatggttctattttaatggggaaggagctagct
agctttaaatccgtcatgaaatcatttatggttttgattataacggcattagccatgggt
gaaactctggcattgattccagaccttttaaaagggaaccaaatggtggcatcggtgttc
gagattatggaccgaaagactcaagttattggggatgttggagaagaagtaacaaatgtg
gaaggtacaattgagctaaggggtgtccactttagttatccatcaaggccagacgtagtc
attttcaaggacttcgatctaaaagtacgttcaggcaagagtatggcactggtggggcaa
agcggatctggtaaaagttcggttcttgttcttatacttcgattttatgatccaacagct
gggaaagtgatgattgatggcagagatatcaggaaactgaagctgaaatcccttcggaaa
cacattggtctagtgcaacaagaaccagctctttttgccacatccatttatgaaaacatc
ctttatggcaaagaaggagcttcagaatcagaaataatagaagcagcaaagcttgccaat
gcacatggtttcataagttccctccccgagggttactcaacaaaagttggggaacgagga
gtgcaactatcgggtggtcagaaacagagagtagccattgctcgagctgttctgaagaac
ccagaaatcttgctgcttgatgaagctaccagtgctctagacgtcgagtcagagcgtgtg
gtgcaacaagctctcgacaggttaatgaggaaccgaacaacagttatggtggcacatagg
ctgtcaactattaaaaatgcagatcaaatctcggttatacaaggaggaagaataatagag
aaagggaatcattctagtctcatagaaaacaaagaggggccgtattttaagttaatcaat
cttcagcagcaacagcattgcagctag
DBGET
integrated database retrieval system
