Gossypium arboreum (tree cotton): 108479299
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Entry
108479299 CDS
T05776
Name
(RefSeq) uncharacterized protein LOC108479299 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
gab
Gossypium arboreum (tree cotton)
Brite
KEGG Orthology (KO) [BR:
gab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gab03016
]
108479299
03036 Chromosome and associated proteins [BR:
gab03036
]
108479299
Enzymes [BR:
gab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
108479299
Transfer RNA biogenesis [BR:
gab03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108479299
Chromosome and associated proteins [BR:
gab03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108479299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
Motif
Other DBs
NCBI-GeneID:
108479299
NCBI-ProteinID:
XP_017637297
LinkDB
All DBs
Position
6:73898283..73916980
Genome browser
AA seq
1837 aa
AA seq
DB search
MAAAVISSLSKSFGQIPPSAIPPMLDCILTSTAVSSSSLFSSILDDLPDLIESGNRDGKL
DSDRRNSIASMIGALCHLLTKANIGREELQSFLWKGFIPLMKMGHDFDQELLNQIADSFF
DVVQSIHAWEVLEENLVPFSLRSIGLSAGIIQNGDLQGTGLDRSSLFYVSSDLIEKLIEN
LHVGKDCNLFISGYFPLPLSCHVLSITLDAALRNFQAAPLTGSVSENLSSVKSFTANLLW
NLCNVTERLLLQGSESRSCTIGFLLPVIFKAFVSQSSFEISVHREIHIMSRNLFFMRVWK
CCRKLFSLGSLERRDAYRILSLYLSYFSCGGTFQNANMSDGAEEFDIRSEKDLWNEIKRG
LVDEEGLVRKQSLHILKTLLCMDSGNQHHSDISEKKAQGKHSVPHGVTKRELWAYKEAKS
LGVGKICNAVDSGMNSQQQWEAFVLLFEMLEEYGTHLVEAAWNHQITSLLQFSVSHDNFV
SAISGSMHQTQSETWAEVFSWLSILWKRGFCHDNPQVRCMIMQSFLGIEWRNYGSCVKSV
PESFIHGSLMEALNDPVHHSDFGVKGIYSSKTIEGATHFLHHYSSYLNARETVIFLSSLA
SLAKRKSFSRAGLMGLAECIAASAFGAYKYSNNKVKSYEFGTVDEVQLEYSLENFLHDNG
TELLDFLRYVLESSKQHFNPNYRFRVCEKVVEAAASMVPASDVSLEILLHFISTLPREVT
DYGGLLRVRVQDWLLQNHQVTRSGGIQMQLLESLNEFPERFIIHHCLFQNFDDEDLDVWE
FEVRRWARVLFLVIKEEHQLAPLMMFIQQHGTNIRKQNNHSEWVPVKFLSLILGLIQEIQ
VMQRRKHGPKVQTKFEIQRLETEEQSSEAEASNIYNMFTDSLLLILEELVSFCNLSCSIF
SSGSDIEDKVLPSSVRGKLGGPSQRRLSISLTTAVLQATISVKAVAYIYAWCAQHRTGIL
LNSAFTAVWKFFCNTITSPTCNSESEAEVRIAAYEALAPALKALVSVLAPQILVLFMENS
KSLQPAIEGEPWLDTLVLSFLQNINNLLAVGFMVRTRRAVLLNWKWVILESLLSIPYYSF
GSKLQQEDGSFFFSDAALINIFTDTVESLENAGEGSVLPILRSIRLALELFASRRLSLVV
SRFTGVDSQMIWRLVHSSWILHSSCNKRRVAHIAALLSSVLHPSLFSDGDMHDADNEPGP
LKWFVEKLLEEGTKSPRTIRLAALHLTGLLLSNPTTIKYYIKELKLLTLYGSVAFDEDFE
AELSENDDARTEVTLLTKIQDSELTEAFINTELYARVCVANLFYKLADLTNRSGSSTGDK
ASQSALESGKLFLLELLDTVLNDKELAKELYKKYSAIHRRKIRAWQMICVLSQFVDDDIV
EEVTQCLQIALYRNNLPSVRQYLETFAINIYMKFPSLVAEQLVPLLRDYDMRPQALSSYV
FIAANVILHASKDIQLRHLDELLPPILPLLTSHHHSLRGFTQVLLHQVLCNFFPSLDSKS
SEFIPLEKRCFEDLKLYLAKNSDCMRLRASMEGYLDAYNPKTCVTPAGIFVSRVEEIGFE
CVPTSLMEQVINFLNDVREDLRCSMAKDIVTIKNESLNMAAGSGSTEEVSSACEEKLELP
KDAHLDFQKKITFSKHEKPDLGSSSLLCKGEVYKQLLEMEKEDDLLDQLWKSRSLAMERI
RGNRQHIILVASLIDRIPNLAGLARTCEVFKTQGLAVADAKIVQDKQFQLISVTAEKWVP
VIEVPVNSVKQFLEKKKREGFSILGLEQTANSVPLDQYIYPKKTVLVLGREKEGIPVDII
HVLDACIEIPQLGVVRSLNVHVSGAIALWEYTRQQRL
NT seq
5514 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgttatctcttcactgtcaaagagctttggacaaattcctccatcggcc
attccacctatgttggattgtatattgacctcaactgccgtatcttcgtcgtcacttttc
tcttctattctcgacgatctccccgatctcattgagagtggtaacagagatgggaaattg
gattctgatcgtcggaacagtattgcgtcaatgattggagctttatgccatcttcttact
aaagcgaatattggtcgtgaagagctgcaatcttttttatggaaagggtttattccactg
atgaaaatgggacatgattttgaccaagagcttcttaaccagattgcagattcatttttt
gatgttgtgcaaagtattcatgcctgggaagttctggaagaaaatttggtgcctttttcc
ctaaggtctattggcttgtctgctggtataattcaaaatggagatttgcaaggtaccgga
ttggatagaagctcacttttctatgtctcaagtgacttgattgagaagttaatagaaaat
ttgcatgttggcaaggattgtaacctgtttatatctggatattttcccttgccactatca
tgccatgttttaagcattactttggatgctgcgctacgaaattttcaagctgctccactt
acaggctcagtttcagaaaacttgtcttctgttaaaagtttcactgctaatttactttgg
aatttgtgtaatgtgactgaaagattactcttacaaggttcagaaagtcggtcttgtaca
attggctttcttctacctgtcatattcaaagcatttgtttctcaaagctcttttgaaatc
tcagttcatagggagatacatataatgtccaggaatcttttctttatgagagtgtggaag
tgctgtagaaaattgttctctcttggatcattagagaggagagatgcatacaggatactt
tccctatatttgtcttatttctcctgtggtggaacttttcaaaatgctaacatgagtgat
ggagcggaagagtttgatataagaagtgaaaaagatctttggaatgaaatcaaaagagga
ttggttgatgaggaaggcctagtgaggaagcagtcattgcatatactgaagacactgtta
tgtatggatagtgggaaccaacatcattctgatatttcagagaagaaagcccaagggaaa
cattcagttcctcatggtgtgacaaagagagagctctgggcttataaagaagcaaagtca
ctaggggtagggaaaatctgcaacgcagttgattcaggcatgaatagtcagcagcagtgg
gaggctttcgttctcttatttgaaatgcttgaagagtacggtactcaccttgtagaggct
gcttggaatcatcagataacttcgttgcttcaattttctgtctcacatgataacttcgtg
agtgctattagtggaagcatgcatcaaactcagtcagaaacttgggctgaagtctttagc
tggttatcaattttgtggaagagagggttttgtcatgataatcctcaagttaggtgcatg
atcatgcagtcatttttgggaatagaatggagaaattatggaagctgtgtgaagtcagta
cctgagagttttattcacggttcattgatggaagctttgaatgatccagttcaccacagt
gattttggtgttaaagggatttactcttcaaaaacaattgagggtgctactcattttttg
catcactattcaagctacttgaatgcaagggaaacagttatctttttaagcagcttagca
tcccttgctaaaaggaaatcttttagtagagccggcttgatgggtcttgcagaatgtatt
gctgcatctgcttttggggcttataaatacagcaacaataaagtaaaatcttatgaattt
ggtactgttgatgaggtccaactggaatattctttggagaactttctgcatgataatggg
acagagttgctcgattttcttagatatgttcttgagagtagcaaacaacatttcaatcct
aattaccgttttcgagtctgtgaaaaagtagtagaggctgctgcttctatggtgccagca
agtgatgtttctcttgagatacttttgcacttcatttctactttgccacgggaagttact
gattatggtggtttgctacgtgtaagagtacaagactggcttttgcaaaatcatcaagtt
actcgttctggtggtatccagatgcagcttttggaaagtctcaatgaatttccagaacgg
tttattattcatcattgtttatttcaaaattttgacgatgaagacttggatgtgtgggaa
tttgaagtgagaagatgggcaagagtactatttcttgtaatcaaggaagaacatcaatta
gcacctttaatgatgtttatacaacaacatggaacaaatattcgtaaacaaaataaccat
tcagagtgggtacctgtgaaatttctctcccttatattgggcttaattcaagagatccag
gtaatgcagaggagaaaacatgggcccaaagttcaaaccaaatttgaaattcagcgactg
gagacagaggagcaatcaagtgaggcagaagcttcaaacatttacaatatgttcactgat
tctttacttcttatactggaggaacttgtatccttttgcaacttgtcttgttccatattc
tcatctggttctgatatagaggacaaggttctgcctagttctgtgagaggaaaacttggt
ggtcctagtcaacgaagattatcaatttccttgacaactgctgtgttgcaagctacaatc
tccgttaaagctgttgcatatatctatgcctggtgtgcacaacacagaaccggtattcta
ttaaattctgccttcactgctgtgtggaaattcttctgtaatactatcacatctccaact
tgcaactctgagagtgaagctgaagtacgtattgctgcatatgaagcgttagctcctgcg
ttgaaagcacttgtctctgtattggctcctcaaattttggtcctttttatggaaaatagc
aagtcgttacaacctgcaatagaaggtgaaccttggttagataccttggttctttctttt
cttcagaatatcaataatcttcttgctgttgggtttatggtgcgcactaggcgggcagtt
ttgcttaattggaagtgggttatcttggaatctctactctcaattccttattatagtttt
gggagtaagcttcagcaagaggatggtagcttttttttctctgatgctgctctcataaac
atttttactgatactgttgagagccttgagaatgctggggagggttctgttttacccatc
ttgaggtccatcagattggccttggagctatttgcttcacgaaggttgtctttggttgtt
tccagattcactggtgtagattctcagatgatttggcgtttggttcattcttcttggata
ttgcattctagctgcaacaagcggagggttgcacatattgctgcactgttatcttctgtc
ttgcatccatccttgtttagtgatggggacatgcatgatgctgataatgaacctgggccc
ctgaaatggtttgttgaaaagcttctggaggagggcacaaaaagtccccggactatccgt
cttgcagctttacatttgacagggctcttgctatcaaatccaacaaccataaaatactac
ataaaagaactgaagctgctaacactctatggctctgttgcttttgatgaggattttgaa
gccgagttatctgaaaacgatgatgcaagaactgaagttacattattgactaaaatccaa
gattctgagttgaccgaggcatttataaacacagagttgtatgcacgcgtgtgtgttgct
aatctcttctacaagcttgctgacttgaccaataggtcgggatcatctaccggagacaaa
gcatcccagtcagcccttgaatcaggaaaattgtttctgcttgagcttttggatactgtg
ctaaatgataaggagcttgcaaaagagttgtataagaagtatagcgcgatccataggcga
aaaatacgtgcttggcaaatgatatgtgttttgtcacaatttgttgatgatgatatagtt
gaagaagtcacacagtgcttgcaaatagctctctatagaaacaacttaccttctgttcgc
cagtatttggaaacatttgcaattaatatttacatgaagtttccctctttggttgcagag
caattggttcccttattacgagattatgacatgaggccacaggcactttcttcctatgtc
ttcatagcagctaatgtgatcctccatgcttctaaggacattcaactcaggcatttggat
gaactacttcctcccatacttccgttactaacatcacatcatcatagcttacgtggcttt
actcaggttttgttacaccaagtactttgcaatttttttccatcactggattctaaaagt
tctgaattcatacctttggaaaaaaggtgctttgaggatttgaaattgtacctggcaaag
aattctgattgcatgcgcttgcgagcttcaatggaaggctatctggatgcttataatccc
aaaacctgtgttactcctgctggaatttttgttagtcgggtagaggaaatcgggtttgaa
tgtgttccaacatctctcatggaacaagtgatcaactttctgaatgatgtgagggaagac
ctgagatgttcgatggcgaaggatattgtcacaatcaagaatgagagtctaaatatggct
gcaggttctggatcgactgaagaagtatctagcgcttgtgaagagaaattggagttgcct
aaagatgctcatttggacttccagaaaaagattactttctctaaacatgagaagccagac
ttgggttccagttccttattgtgcaagggagaagtgtacaagcaacttcttgaaatggaa
aaggaagatgatcttcttgatcagttgtggaagtctagaagcttggctatggagaggata
agaggaaatcggcagcatattatcctagtagcatcattgattgatcgcatacccaacctt
gctggattggcacgtacctgtgaggtttttaaaacacaggggttagctgttgcagatgca
aaaatagtacaggacaaacagtttcaactcatcagtgtgacagcagagaaatgggttcct
gttatagaggtccctgtaaatagtgtgaaacaattcttggagaaaaagaagcgggaaggt
ttttcgatcttgggactagagcaaactgcaaacagtgtacctcttgatcagtatatctat
ccgaaaaagactgtgttggttcttgggcgtgaaaaagagggtataccagtggatataatc
catgttttggatgcttgcatcgagatacctcagctgggagttgttcgatcacttaatgta
catgtgagtggagccattgctctatgggagtatactcgacagcaacgattgtga
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integrated database retrieval system
