Gymnodraco acuticeps: 117541442
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Entry
117541442 CDS
T09661
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
gacu
Gymnodraco acuticeps
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gacu03016
]
117541442 (cdkal1)
Enzymes [BR:
gacu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
117541442 (cdkal1)
Transfer RNA biogenesis [BR:
gacu03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
117541442 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
117541442
NCBI-ProteinID:
XP_034064478
EnsemblRapid:
ENSGAUG00000010724
UniProt:
A0A6P8TKA6
LinkDB
All DBs
Position
Unknown
AA seq
566 aa
AA seq
DB search
MPSPCDSLIDDIEDMVSSSDPTPHERQSARKSIMPRFRKKKEPLSQEELHTDSLIPGTQK
IWMKTWGCSHNNSDGEYMAGQLAASGYKMTDDPTDADLWVLNSCTVKNPAEDHFRNSIKK
AQEQQKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAIKGHSVRLLGQKKDG
GRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYSIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVEEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYGFLHVPVQSASDSVLMDMKREYCIDDFKKVVDFLKEKVPGVTIATDLICG
FPGETEGDFQETVELVKLYRFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKELSQLFH
SYNPYDHEVGERQHVLVTEESFDAQYYVSHNKFYQQVLVPMRAEFKGKMIEVDIYEAGKH
FLKGRPVEDSKPFTASIAAPLQKGEVSGLKQEPMANGFQGPSSSMSSPSHLLIGSYSVDR
EVLKKLIIGVTLAAAILSYIVEKLYT
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgccatccccctgtgactctctgattgacgacattgaggacatggtgtcctctagcgac
cccacacctcatgagagacagtctgctcgaaagagcatcatgccgaggttcaggaagaaa
aaagagcctctgagccaagaggagctgcacactgatagtttaatccctggcacccaaaaa
atctggatgaaaacgtggggctgcagtcataacaactcggatggagagtacatggccgga
cagttagctgccagcggatacaagatgacagatgacccaactgacgcagacctgtgggtg
ctcaacagctgtaccgtgaaaaacccagcagaggaccacttcaggaactcaatcaaaaaa
gcccaggaacagcagaagaaggtggtagtagcaggttgtgttccccaggctcagccacgg
atggactacctaaaaggactcagcatcatcggggtccaacagattgatcgtgtggtggaa
gtagtggacgaggcaattaaaggtcactcagttcgtctgctgggtcagaagaaagatgga
ggccggaggctcggtggagcaagactggacctgcccaagatcaggaagaaccctctcatc
gagatcatctccattaacacaggatgtttgaatgcgtgtacctactgtaagactaaacat
gccagaggagacctggccagctattccatcgaggagctagtggagagagccagacagtct
ttccaggagggagtgtgtgagatctggttgaccagtgaagacacaggtgcctacgggaga
gacataggcacagacctgcccacactgctgtggagactggtggaggagatccctgaagga
gccatgctgaggctgggtatgaccaacccaccgtatatcctggaacacctagaggagatg
gctaagatattaaatcatccgcgggtctatggcttccttcatgttcctgtgcagtcggcc
tcagacagtgtcctgatggacatgaagagagagtattgcatcgatgacttcaagaaagtg
gtggacttcctcaaagagaaggtcccgggtgttaccattgctacagatttaatctgcggt
tttcctggtgagacagaaggagacttccaagagacggtagagttggtgaagctctaccga
ttccccagtctgttcatcaaccagttttaccccaggcccggtacacctgccgccaagatg
gagcaagttccagcacatgtgaaaaagcagaggactaaagagctgtctcaactcttccac
tcttacaacccctacgaccacgaggtaggggagaggcaacatgtgctggtgacagaggag
tcatttgatgcccaatactatgtgtctcacaacaagttctaccaacaggtgctggtgcct
atgagggctgagttcaaagggaagatgatcgaggtggacatttacgaggcaggaaaacac
ttcctgaaaggccgaccagtagaagacagtaagcccttcactgcctccattgctgccccg
cttcagaaaggagaggtgtctggcctgaagcaggaaccgatggctaatggcttccaaggt
ccctcttcctcaatgtcttctccatctcatttgttgatcggctcctacagtgtggacagg
gaagtattgaaaaagctgataatcggggtcactctggcagcagccatcttgtcctacatc
gtagagaaactgtacacatag
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