Gymnodraco acuticeps: 117552702
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Entry
117552702 CDS
T09661
Symbol
polr2a
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
gacu
Gymnodraco acuticeps
Pathway
gacu03020
RNA polymerase
gacu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gacu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117552702 (polr2a)
09124 Replication and repair
03420 Nucleotide excision repair
117552702 (polr2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gacu03021
]
117552702 (polr2a)
03400 DNA repair and recombination proteins [BR:
gacu03400
]
117552702 (polr2a)
Enzymes [BR:
gacu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
117552702 (polr2a)
Transcription machinery [BR:
gacu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
117552702 (polr2a)
DNA repair and recombination proteins [BR:
gacu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
117552702 (polr2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
117552702
NCBI-ProteinID:
XP_034082172
EnsemblRapid:
ENSGAUG00000004648
UniProt:
A0A6P8W3I7
LinkDB
All DBs
Position
Unknown
AA seq
1968 aa
AA seq
DB search
MHGPPSGDSACPLRTIKRVQFGIISPDELKRLSVTEGGIKYPETTEGGRPKMGGLMDPRQ
GVIDRSGRCQTCAGNMTECPGHFGHIELAKPVFHVGFVTKIMKILRCVCFFCSKLLVDPT
NPKIKDILIKSKGQHRKRLTHVYELCKGKNICEGGEEMDNKFGMEQQDAEEDLTKDKGHG
GCGRYQPRIKRTGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEEDVILGLDPKF
ARPEWMIVTVLPVPPLAVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQSGAAAHV
IAEDVKLLQFHVATMIDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVDFS
ARTVITPDPNLHIDQVGVPRSIAANMTFPELVTPFNIDRLQELVRRGNSQYPGAKYIIRD
NGDRIDLRFHPKPSDLHLQIGYKVERHMCDGDIIIFNRQPTLHKMSMMGHRVRILPWSTF
RLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTL
TAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPALLKPRPLWTGKQIFSLIIPGHINV
IRTHSTHPDEEDSGPYKHISPGDTKVIVENGELIMGILCKKSLGTSAGSLVHISYLEMGH
DITRLFYSNIQTVVNHWLLIEGASIGIGDSIADAKTYLDIQNTIKKAKQDVIEVIEKAHN
NELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVAGSKGSKINIS
QVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMG
GREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDGTVRNSINQVVQLRYGEDGLAGENVE
FQNVATLKPSHKAFEKKFRFDCTNERAMRRILQEDVVKDVLTNANVQSSLEKEYDRMKED
REVLRAIFPTGDSKVVLPCNLARMIWNAQKIFRINIRTPTDLNPLRVVEGLQDLSKKLVI
VNGEDPLSRQAQQNATLLFNIHLRSTLCSKRMTEEFRLSTEAYDWLLGEIEAKFNQSIAH
PGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVF
LLGQAARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQNTVVAEDQEWVNVYYEMPDF
DVTRISPWLLRIELDRKHMTDRKLTMEQIAEKINSGFGDDLNCIFNDDNAEKLVLRIRIM
NSDENKFQEDEEVVDKMDDDVFLRCIESNMLTDMTLQGIDQISKVYMHLPQTDNKKKIII
TEEGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALEREL
NHVISFDGSYVNYRHLSLLCDTMTSRGHLMAITRHGINRQDTGPLMKCSFEETVDVLMEA
SSHAENDPMKGVSENIMLGQLAPCGTGCFDLLLDAEKCKYGMEIPTNIPGISVAGPTGMF
FGTVPSPMSGMSPAMTPWNTGATPAYGAWSPSIGSGMTPGAAGFSPSAASDASGFSPGYS
PAWSPTPGSPGSPGPASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQSPGYSPTSPSY
SPTSPSYSPTSPNYSPTSPSYSPTLPTQLPPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYXPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPNYTPHLSQYSPPLPLNSPTSPSLLPDLPQLHPTSPNYSPTXPSYSPTS
PSYSPSSPRFTPQSPTYTPSSPSYSPSVPLLLPHLPQNIPPPSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSPAISPDDSDEENN
NT seq
5907 nt
NT seq
+upstream
nt +downstream
nt
atgcatggaccgccctccggcgacagcgcatgcccattgcgcacgatcaagagagttcaa
ttcggcatcatcagcccagatgagcttaaacggttgtccgttacggaggggggtatcaaa
taccccgaaacaacagaaggaggacgtcctaaaatgggtggccttatggaccccagacaa
ggggtcatagaccgatctgggagatgtcagacatgtgcaggcaacatgacagaatgccct
ggccacttcggacacatagaactggcaaagccagtcttccacgtcggcttcgtaacaaag
attatgaagattcttcgttgtgtctgcttcttttgctctaagcttctagtggatccaacc
aatccaaagatcaaagacatccttataaaatctaaagggcagcacagaaaacgtttgaca
catgtatacgagctgtgcaagggaaaaaacatctgtgaaggaggagaggagatggacaac
aagtttggaatggaacagcaggatgctgaggaggaccttaccaaggacaagggtcacggt
ggctgtgggcgttaccaaccccgcatcaaacgcaccggcttggagctgtacgccgagtgg
aagcacgttaacgaggattcacaggagaagaaaatcctgctgagtcctgaacgtgtgcac
gagatcttcaagcgcatctccgatgaagaagacgtcatcttgggcttggaccccaagttt
gcccggccagagtggatgattgtaacggtgttacctgtgcctcccctggctgtcaggcct
gctgtcgtcatgcagggctctgctcgaaaccaggatgacttgacccacaagctggcggat
attgtcaaaatcaacaaccagctgagaagaaacgagcagagcggcgctgcggctcacgtc
atcgctgaggatgtcaaactgctccagtttcacgtagccaccatgattgacaacgagctg
ccaggcctgccaagggcaatgcaaaagtctggccgtcctctaaaatcccttaaacagcgt
ctaaaggggaaggagggccgagtccgaggtaacctcatgggtaagcgcgtggacttctcc
gcgcgtaccgtcatcacgccagaccccaacctgcatatcgaccaagtaggcgtgcctcga
tccatcgcagccaacatgaccttcccagaactcgtcacaccctttaatatcgacagatta
caagagctggtacgaagaggcaacagccagtacccaggagccaaatacatcatccgggac
aacggagaccgaattgaccttcgatttcaccccaaaccaagtgaccttcacctgcagatc
ggctacaaggttgaaagacacatgtgtgacggcgacatcatcatcttcaacagacagcct
acactacataaaatgtccatgatggggcacagggtccgaatcctgccgtggtcaacgttt
cgcctcaacctcagtgtaaccaccccatacaacgctgactttgacggagatgagatgaac
ctccacctgcctcagtccctggagacgagggctgaaatccaggagctggccatggtgccg
cgtatgatcgtcaccccccagtccaacaggcccgtcatgggtatcgtgcaggacaccctc
acagccgtgcgcaaattcaccaagagagacgttttcttagagaggggggaggtgatgaac
ctcctcatgttcctctccacctgggatggaaaagtgcctcagccggccctcctgaagccc
cgccctctgtggaccgggaagcagatcttcagcctaatcattcccggacacattaacgtg
atccgcacacacagcacccatcccgacgaggaggacagcggcccctacaagcacatctca
cccggggacaccaaggtcatagtggagaatggggagctgatcatgggcatcctgtgtaag
aagtccctgggaacctccgccggctccctcgtccacatctcgtacctggagatgggccac
gacatcaccagactcttctactccaacattcagactgtggtcaaccactggctgctcatc
gagggtgcttccattggtattggtgactccattgctgatgccaagacctacctcgacatc
cagaacaccatcaagaaagccaaacaggatgtgatagaagtcatcgagaaagcccacaac
aacgagctggagccgacccccggtaacactctgaggcagacctttgagaaccaggtgaat
cgtatcctgaacgacgctcgtgacaaaactggatcctccgcccagaagtctctgtctgag
tacaacaacttcaagtccatggtggtggccgggtccaaaggctcaaagattaacatctca
caggttatcgccgtggtggggcagcagaacgtggagggtaagcgaatccccttcggcttc
aaacaccgcacgctgcctcacttcatcaaggatgattacggtcctgagagcagaggcttc
gtggagaactcctacctggccgggctgacgcccactgagttcttcttccacgccatggga
ggcagagagggtcttatcgacacagccgtcaagacagccgagactggttacatccagcgt
cgtctgatcaagtccatggagtcggtgatggtgaagtacgacggcaccgtgcgtaactcc
atcaaccaggtggtgcagctgcgctacggagaggatggcctggcaggagagaacgtggag
tttcagaatgtggcaacgctcaaaccctcacacaaggccttcgagaagaagtttaggttt
gattgcaccaatgagcgagcgatgaggcggattctgcaggaggacgtagttaaagacgtg
ttgaccaatgccaatgtgcagagctctttggagaaggagtatgacaggatgaaggaggac
agggaggtcctccgagccattttccccaccggggacagtaaggttgtgctgccatgcaac
ctggccagaatgatctggaacgctcagaagatcttccgcatcaacattcggaccccgaca
gacctcaaccctctgagggtggtcgagggtcttcaagacttgagtaaaaagctggtgatc
gtgaacggcgaagacccgctcagtcgacaggcccagcagaacgccaccctgctcttcaac
atccacctgcgctccaccctctgctccaaacgcatgacggaggagttccgcctttccact
gaagcctacgactggctgctgggagagatcgaggccaaattcaaccagtccattgctcac
cctggagaaatggtgggcgctctggctgctcagtctctgggagagcccgccacccagatg
accctgaacactttccattacgccggtgtgtccgccaagaacgtaacactgggtgtgcct
cgtctaaaggagttgatcaacatctccaagaagcccaaaaccccctcgctgaccgtgttc
ctgctgggtcaggcagcccgtgacgccgagagggccaaagacatcctctgtaggctggag
cacaccacactgcggaaggtcacggccaacaccgccatctactacgaccccaacccccag
aacacggtggtggccgaggaccaggagtgggtgaacgtctattatgagatgcccgacttt
gacgtgacgcgcatctcaccgtggctgctgcgtatcgagcttgaccgcaagcacatgacc
gatcgcaagctgaccatggagcagatcgcagagaagatcaactcaggtttcggagatgac
ttgaactgcatcttcaatgacgacaatgcagagaagctcgttctgcgaatccgaatcatg
aacagcgacgagaacaagttccaagaggatgaggaggtggtggacaaaatggacgatgac
gtgttcttgaggtgcattgagtccaacatgctgactgacatgaccctgcaaggcattgac
cagatcagcaaggtgtacatgcacttgccccagactgacaacaagaagaagatcatcatc
acggaggaaggtgagttcaaggccctgcaagagtggatcctggagacggacggtgtgagc
ctcatgagggtcctcagcgagaaggacgtggatcccgtcaggaccacctccaacgacatc
gtggagatcttcacggtcttgggaattgaggcggtgcggaaggctctggagagggagttg
aaccacgtcatctcctttgacggttcctacgtcaactaccgccatttgtctctgctttgt
gacaccatgacctcccgcggtcatctgatggccatcacgcgtcacggcattaaccgtcaa
gacacaggaccgctcatgaagtgttcctttgaggaaacggtggatgtgttgatggaggca
tcctcccacgctgagaacgaccccatgaagggtgtgtcggagaacatcatgctcggccag
ctggccccatgtggtacaggatgcttcgatttgctgttggatgcggagaagtgtaaatac
ggcatggagatccctacaaacattcctggcatcagcgtggctggacctactggaatgttc
tttggcacagtgccaagtcccatgagcggtatgtcgcctgccatgaccccctggaacaca
ggagcgacccccgcctacggagcctggtcccccagcatcggaagcggcatgacccccgga
gcggcaggtttctcgcccagcgcggcgtcagacgccagtggcttctctcccggctactcc
cccgcctggtctcccactcctggctctccggggtctccaggacctgccagcccctacatc
ccatctccaggtggagccatgtcacccaactactcccccacctcccccgcgtacgagcct
cgctcccccggaggctacaccccccagagccccggctactcccccacctccccctcctac
tcccccacgtctccctcttactccccgaccagccccaactacagccccacgtctccctcc
tactcccccaccctccccacccagttaccccccacctcccccagttactccccgacctct
ccatcctactctcccacgtctccctcctactcccccacctccccgtcttactccccaaca
tccccctcctactcccccacctcacccagctacagcccgacgtcgccaagctacnagccg
acgtcacccagctactcccccacttcaccttcctactcccccacctccccctcttattct
ccaacctctccatcttactcccccacctccccgtcttactcccccacctccccttcctac
tcgccgaccagcccgagctacagtccgacatcgcccaactacaccccccacctctcccag
tactccccacctctccctcttaactctccaacatcgccctccttactccccgacctcccc
caactacacccgaccagccccaactactcccccaccntcccctcgtactcccccacttct
ccgtcttactcgccctccagtcctcgcttcacccctcagtctcccacctacacccccagc
tccccctcatatagccccagcgtccccctcctactcccccacctcccccaaaatataccc
ccaccctccccctcgtacagccccagctccccggagtacacccccacctctccaaagtac
tcccccacctcgccgaagtactccccaacatcgccgaagtactctcctacttcgcccacc
tactccccgacgactccaaaatacagccccacctctcctacctactcccctacctccccc
acgtacacccctaccagccccaaatactccccgacctctcctacttactcccccacttca
cccaagtactcacccacgtctcctacctactcgccgactagtcccaaaggctccacgtac
tcccccacctctccgggctacagccccacgtcgcccacctacagcccggccatcagcccc
gatgacagcgacgaggagaacaactga
DBGET
integrated database retrieval system
