Gambusia affinis (western mosquitofish): 122819186
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Entry
122819186 CDS
T07758
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04020
Calcium signaling pathway
gaf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122819186 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122819186 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122819186 (grin1a)
Ion channels [BR:
gaf04040
]
Ligand-gated channels
Glutamate (ionotropic)
122819186 (grin1a)
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GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
122819186
NCBI-ProteinID:
XP_043951628
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Position
LG17:20675767..20726512
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AA seq
964 aa
AA seq
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MRLFLLAVLLSCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVNQANQVYGRDKFKLNAI
SVTHKANAIQMALSVCEDLIHSQVYAILVSHPPQSSDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVVILSA
SEDDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIALQLINGKNESAHITD
AVAVVAQSIQELFEKENITEPPKGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYTILNYQKSRLVQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTMQDGTCNEEKALNGVTIKKVICTGPNETIPGRPIVPQCCYGFCVDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
AAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDSKEASGSQAVTGTPSLPSSS
VETQDDRKSGRAEPDPKKKASFRSISTTLASSIKRRRSSKDTQFPPTDATGQLNLSDPSV
STVV
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttctgctggcggtgctcctctcgtgctcctgcgcgcgggccggctgcgag
cccaagatcgtgaacatcggggccgtcctgagccagaagaggtacgagcaggtgttcaag
gatgccgtgaaccaggccaaccaggtgtacggccgggacaagttcaagctgaacgccatt
tccgtcacgcacaaggccaatgcgatccagatggctctgtcggtgtgcgaggacctgatc
cacagccaggtttacgccatcctggtgagtcaccctcctcagtccagcgaccatctcacc
ccgacgcccgtctcctacacggccggcttctaccgcatcccggtggtggggctcaccacg
cgcatgtccatctactccgacaagagcatccacctgtccttcctgcggacggtcccgccg
tactcccaccaagctcacgtttggttcgacctgatgcgcgagttcaactggaaccacatc
atcctgatcgtcagcgacgaccacgagggccgggcggctcagaagaggctggagacgctg
ctggaggagcgagagacgaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctacagttcagtcaggagacaaac
ttaaccgcgctgctgctggaggctaaagagctggaggcccgagtcgtcatcctgtccgcc
agcgaggacgatgctgccgccgtgtacaaggcggcccgcttcctcaacatgacgggctcg
ggctacgtgtggctggtgggggagcgggagatgtccggtaaagctctgagcgaggcgcca
gatggtctgatcgccctccagctcatcaatgggaagaacgaatcggcccacatcaccgac
gccgtggcggtggtggcccagtccatccaggagctgtttgagaaggagaacatcacagaa
ccaccgaaaggctgcgtgggcaacaccaacatctggaagacggggcctctttttaaacga
gtgctgatgtcgtccaaatatccggagggtctgacgggacgcgtcgagttcaacgacgac
ggagacaggaaatacgctcactacaccatcctcaactaccagaagtctcgcctggtccaa
gtcggcatttacaacggcacgcaggtggtgatgaacaatcagcgcaagatcatctggcct
ggaggggagacggagaaaccgcagggcttccagatgtcgacccgattaaagatcgtgacg
attcaccaggagccgtttgtgtatgtcaaaccgacgatgcaagacgggacctgcaacgag
gaaaaggcattaaatggagtgactataaagaaggttatctgtaccgggcccaacgagacc
atcccagggcgtcccatcgtgccgcagtgctgctacggcttctgtgtcgacctgctgatt
aaactggccatgaccatgaacttcacctacgaggtccacctggtggctgatgggaagttt
ggaacccaagagcgggtgaacaacagcaacaagaaggagtggaacggcatgatgggagag
ctgctgggtgggctggctgacatgattgtggccccgctgaccatcaacaacgagcgtgcc
cagtacatagagttctctaaaccctttaaatatcaaggcctcactattctagtcaaaaag
gaaattcctcgaagtacgctggactcatttatgcagccgttccagagtacgctgtggctg
ctggtgggtctttcggtgcatgtggtggcggtgatgctttaccttctagaccggttcagt
ccatttggaagatttaaagtaaacagtgaggaagaagaagaagatgccctcaccttgtca
tctgccatgtggttctcctggggagtgttgctgaactctggaattggagaaggtgcaccg
cgcagcttttcagcgagaatccttggcatggtgtgggctggctttgccatgatcattgtg
gcttcttacactgccaacctggctgccttcctggtgttggaccggcctgaggagcgcatc
accggcatcaatgacccgaggctgagaaacccatctgataaattcatctacgccacggtg
aagcaaagctccgtggacatctacttccgacgacaggtggagcttagcactatgtaccgc
cacatggagaaacacaactatgagagtgctgcagaggctatccaggccgtgcgtgacaac
aagctgcatgctttcatctgggactctgcggtgctggagtttgaagcctcgcagaagtgc
gacctggtgaccacgggagagctgtttttccgttcgggctttggcataggcatgcgcaag
gacagcccctggaaacagaatgtgtccctggccattctcagttctcatgagaacggcttc
atggaagacctagataaaacctgggtgagataccaggagtgtgactcacggagcaatgcc
ccagccacactcacctttgagaacatggcaggagtcttcatgctggtggccggaggcatt
gcggcggggatcttcctcatcttcatcgaaatcgcctacaaacgccataaagacgcccgc
aggaagcagatgcagctggcctttgcggccgtcaacgtctggaggaagaacctgcaggac
agtaaggaagcctctggaagtcaagcggtgactgggactccctcgttaccctcttcctct
gtagagactcaggatgataggaaaagtggtagagcagagcccgaccccaaaaagaaagcc
tcttttaggtccatcagtaccaccctggcttccagcatcaagagacgtaggtcctccaaa
gacacgcagttcccacccactgacgccacgggccagctcaacctgtctgacccgtccgtc
agcaccgtggtgtag
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