Gambusia affinis (western mosquitofish): 122822296
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Entry
122822296 CDS
T07758
Symbol
grin2aa
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A isoform X1
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04020
Calcium signaling pathway
gaf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122822296 (grin2aa)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122822296 (grin2aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122822296 (grin2aa)
Ion channels [BR:
gaf04040
]
Ligand-gated channels
Glutamate (ionotropic)
122822296 (grin2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
122822296
NCBI-ProteinID:
XP_043956788
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Position
LG19:complement(8407034..8590507)
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AA seq
1604 aa
AA seq
DB search
MLPLYSMLTSLCDRDPKTHLESRKRNSWMLTMLKCEMRQTGGWIATGPSTPHERCGMKWF
STMSLGSTRSKRRSRRGTNHRGGGESALLSLALLVAVTAMVDPVAAQKQRTGGGSDKVPV
LNIAVILGCTRYISDQDIRALWSKEDPIDVNVVTLLVNKTDPKSIITHVCDLMSGTKIHG
VVFGDGTDQEAIAQILDFISSQTLIPILGIHGGSSMIMADKDVKSTFFQFGASIQQEALL
MLNIMEEYDWHVFSIVTSKFPGYQEFINILKTTVDNSFVGWDLQNIITLDAVEEDSRSQI
MLKKVQSPVVLLYCSKDEAVYILEEARSLGLTGFGYIWIVPSLTTGNPEITPEAFPSGMI
SVSYDDWDYPLEARVRDGLGIITSAAAAMLVEYGDIPEAKTSCYGPMEKTSKLPPSALHK
YMMNVTWDGRDLSFTEDGYQEYPKLVVIVLNKEREWEKMGKLDNRSLTLKYPVWPRFNSF
GDAELDDNHLSIVTLEEKPFVIVEDVERLTGTCMRNSVPCRKHIKDNTTEAGGTYIKKCC
KGFCIDILKKIAKYVKFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKKAVMAVGSLTINE
ERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLLVTAMAVFMF
EYISPLGFNRNLAQGKDPHGPSFTMGKAVWLLWGLVFNNSVPVQNPKGTTSKFIVSVWAF
FAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQNPYAYSPPFRFGTVPNGSTERNIRK
NYPDMHQYMVKYHQTGVVDALVSLKSGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIF
ATTGYGIALQKGSFWKRQVDLAILAIIGDGEMEELEAQWLTGICHNEKNEVMSSQLDVDN
MAGVFYMLATAMGLSLITFVSEHLFYWRLRYCFTGVCSGRPGLLFSISRGIWSCIHGVHI
DMKKKTDLDFSPQDKMLKLIKSAKQMTNMSNLSGSRMNSPKREFMHSAGPMIMDMMAEKG
NFIYADNRSYAPKDMIYGDTGDLQSYLANRHKDHLNNYIFQGGQHPLTLNDSNPNTVEVA
VSADTVQTNAKSQRTLWKKSTDTLRSVPPGPSPMPDMLMPDPRISMKTQRYLPEDTAHSD
ISDCSSRGATYKDPENNKHLKPKDNLKKRSMTSKYPRDCSEVELSYLKTKQVSGGTNQSG
RGGGGGEKIYTIDSDREMSLHSDPVHYRESHGLGTDDLDYPEIYSDHSDNYRKCEQPIIH
LNSSPMHHTDSDLLPDSAYSKHYSLKEKNISLSPHESIDRYKQTHCRSCLSKVPSSYQQG
GPYVSTGSATASGTRSPYNRCDACLHTANLYDISEDQLFGDPLVSPTMHHQEEQQPDEMF
GLYWPQTDGPHVQKRNRLRLSRQHSFDNIMLEKPKDVDQGRPARSVSLKEKDRFLDSASD
SHYANLFGMRPYSGRLFGTGSKSVLFNNNLEESKRSKSLYPTHGSENPFLSHSLRDDTSS
RLVHGRSSSDIYKQLAVGSPSLALGAAPIKTRNDANNLRSSVKSTSSYCSRDGRIANDMY
NKEHVMPYSANKTSAYPASRGVLNSAQFSNRRVYKKIPSLESDV
NT seq
4815 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctttgtattccatgctcacttcactgtgcgacagggacccaaaaactcatctt
gagagccggaagagaaactcttggatgctgaccatgctaaaatgcgaaatgagacagacg
ggcggatggatagctacaggcccctccaccccacatgaaagatgtgggatgaagtggttt
agcaccatgtccctcggcagcacaaggagtaagaggaggagtagaaggggcaccaatcat
cgcggtggaggtgaaagtgcgctgctctccctggcccttctggtggcggtgacggccatg
gtggacccggtggcagcacagaagcagcggacgggcggcggttcggataaagtgccggtt
ctgaacatcgctgtgatcctgggttgcacgcgctacatctcagaccaggacattcgggcg
ctgtggagcaaagaggaccctatcgacgtcaacgtggtcactctgctggtcaacaagacc
gacccaaaaagcatcatcacccacgtgtgtgacctgatgtcagggaccaagatccacggc
gtggtgtttggggatggcactgaccaagaggccattgcccagattttggattttatttcc
tcgcagacactcatacccattttgggcatccatggaggctcgtccatgatcatggctgac
aaggatgtgaagtcgacatttttccagtttggtgcttccatccagcaggaggccctgtta
atgctgaacatcatggaagagtatgactggcatgtgttctcaattgtcacgtcaaagttt
cctggataccaggagttcatcaacatcctaaaaactacagtggacaacagttttgtgggc
tgggacttgcagaatatcatcactctggatgccgtggaggaagacagccggtctcagatc
atgctcaagaaggtccagtctccagtggtcctgctttactgctctaaagatgaagcggtg
tacattttggaggaggctcgctctctgggcctgactggattcggttacatctggattgta
ccgtcgctcacaacggggaaccccgagataacaccggaggcatttccatcggggatgatt
tcagtgtcgtacgacgactgggactacccgttggaggcgcgcgttcgtgacggactgggg
atcataacgtctgccgcggcagccatgttggtggagtacggtgacatcccagaagccaag
acatcctgttatggcccgatggaaaagacatcaaagctcccgcctagtgctctacacaag
tacatgatgaacgtgacatgggatggcagggacttgtcattcacagaggatggctaccaa
gaatacccaaagcttgtcgtcattgttctcaataaagagagagagtgggaaaagatgggc
aaacttgacaatcgcagcctgacacttaaatacccagtgtggccacggttcaactccttt
ggcgatgccgagcttgacgacaaccacctgtccattgtcaccttggaggagaaacccttt
gttattgtggaggatgttgaaagactcactggtacctgtatgaggaactctgtgccctgc
aggaagcatatcaaagacaacacaactgaggctggtggaacatatatcaaaaagtgctgc
aaaggcttctgcattgacattctgaagaagattgccaagtacgtcaaatttacgtatgac
ttgtacctggtaaccaatggcaagcatggcaagaaaatcaacaatgtctggaatgggatg
gtgggagaggtggtctataagaaagccgtcatggccgtcggatctctgacgatcaatgag
gagcgttctgaggtcatcgatttctccgtcccgttcgtagaaactgggatcagcgtcatg
gtctcacgtagtaatggaactgtctcgccatcagcttttctcgagccattcagtgcatca
gtgtgggtgatgatgtttgtgatgctcctactggtgactgcaatggctgtcttcatgttt
gagtacatcagtcctcttggctttaacagaaatctggcacaaggaaaagatccccacggt
ccttcttttaccatgggcaaggccgtttggctgctgtggggtctggtctttaacaactct
gtgccagtgcaaaaccctaaaggaaccaccagcaagttcatagtgtcggtgtgggccttc
tttgctgtcatcttcctggcctcctacactgctaacttggctgccttcatgattcaggag
gagtttgttgaccaagtcactgggctgtcagacaacaagtttcagaatccatatgcgtac
tctcctccgttccgctttgggacagtcccgaatggatccacggaaaggaacatcaggaag
aactacccagacatgcaccagtacatggtgaagtaccatcaaactggtgttgtggacgca
cttgtcagcctcaaatcaggcaaactggatgccttcatttatgacgctgcagtgttgaac
tacatggctgggagagatgaagggtgtaagcttgtgaccatcggcagcgggtacatattt
gctaccactggttatggcattgctctgcagaaaggctccttctggaagcgacaggtggat
ctggctatcttggctatcatcggagatggtgaaatggaagaactggaggcccagtggctg
acaggaatctgtcacaatgaaaagaacgaagtcatgtcaagtcagctggatgtggacaac
atggcgggggtcttctacatgctggccacagcgatgggactctccctcatcacctttgtc
tcggagcatctcttctactggaggctgagatactgttttaccggagtgtgttctggcagg
ccaggccttcttttctccatcagcaggggaatctggagctgtatccatggtgtacacatt
gacatgaagaaaaagacagaccttgacttcagcccccaggacaaaatgcttaagctcatt
aagtctgcgaaacagatgaccaatatgtctaacctcagtggctcccgcatgaactcgcct
aaacgagaattcatgcactcagctggtcccatgatcatggacatgatggcagagaaaggc
aacttcatttatgctgacaacagaagctacgctcccaaagatatgatctatggggacacc
ggtgaccttcagtcttatcttgcaaatcgccacaaagaccacctcaacaactatattttt
caaggcgggcagcatcccctgaccctgaatgattccaatccaaataccgttgaggtagca
gtgagtgctgacacagtccaaacaaatgcaaagtctcagcgaaccttgtggaaaaagtca
accgacacattgcgttctgtgccaccggggccttctccaatgcctgacatgctaatgcca
gatccacgaatatccatgaagacacagcgctacctcccagaagacacagcccactccgac
atctctgactgttccagcaggggagccacctacaaggacccagaaaacaacaagcacctg
aaacccaaggacaacttaaaaaaaagatccatgacgtcaaaataccctagggattgcagt
gaggtggagctgtcctacttaaaaactaagcaggtcagcggtggaaccaaccaaagtggg
agaggaggaggaggaggagagaaaatctacacaattgattcagacagggagatgagcctc
cattcagatcctgttcactaccgggagagtcatggtcttggaacagatgatttggattac
cctgaaatttactctgaccacagtgataactatagaaagtgtgagcagccaatcattcat
ctgaactcctcacctatgcatcacacggactcagatcttctgccagactcagcttactct
aagcactacagcctaaaagaaaaaaatatctccctgtcccctcatgaatccattgaccgg
tacaaacagacacactgccgatcctgcctgtccaaagtaccctctagctaccaacaagga
gggccttacgtctctacaggatctgccacagcatctgggacgcgatctccatacaatcga
tgtgatgcatgccttcacacagccaatttgtatgacattagtgaggaccagctttttggt
gatcccttggttagccccaccatgcatcaccaagaggagcagcagccagacgaaatgttt
ggtctatactggccacagacagatgggccacatgtccagaaaagaaaccgtttgaggcta
agtcgtcagcactcctttgacaacatcatgctcgaaaagcccaaggatgtagaccagggc
cgaccagcacgtagcgtcagcctcaaggagaaggatcgcttcttggactcagcatctgac
tcccactatgccaatctctttgggatgcgcccttactctggcagactctttggcaccggg
tctaaatcagtgctgtttaacaataaccttgaggaaagcaagaggagcaagtccctgtac
ccaactcatggctcggaaaaccctttcctcagtcactcattgagggatgataccagcagc
agactggtccatgggcgtagctcctctgacatttacaaacagctggcagtaggttctcct
tcattggccctaggagcagctcccatcaaaacacgcaatgatgcgaacaatcttcgctct
tctgttaaatccacctcttcatactgctcaagggatgggcggatagctaatgacatgtat
aataaagagcatgtgatgccttactcagccaataagactagtgcatacccagcctcaagg
ggtgtcctaaactcagcccagttcagcaatagacgggtgtataagaaaattcccagtctg
gagtcagatgtttag
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integrated database retrieval system
