Gambusia affinis (western mosquitofish): 122822297
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Entry
122822297 CDS
T07758
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04010
MAPK signaling pathway
gaf04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122822297
04020 Calcium signaling pathway
122822297
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122822297
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122822297
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
122822297
NCBI-ProteinID:
XP_043956790
LinkDB
All DBs
Position
LG19:complement(8605774..8747058)
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AA seq
2503 aa
AA seq
DB search
MTDGEGRVRFQYEACQEQGEVQEDVRLSVSAGHRTDAPDHNGDPKGQRGGGWEEEQKQQE
EEKEEAVEKKRRGSCGGRGQRRDEWSVEVQECEEDQEPELEMEAGPTLGVRITAPIRDPD
CVSEEEEQQPYPALTPVAFFCLKQTTRPRNWCLRMVCNPWFEHVSMLVILLNCVTLGMFQ
PCEDVTCLSEWCRILQVLDDCIFAFFAVEMVIKMVALGIFGPNCYLGDKWNQLDFVIVMA
GVMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVF
FIFGIVGVQLWAGLLRNRCFLGEDIISLYNQSIHPYYMSEDGEDSPFICSAPRENGMLRC
RDVPPFTQGGEDCSRPAPHQSSVLIGSPPGVGGSSNSSCVNWNQYYNVCRPGDLNPHKGA
VNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVI
ATQFSETKQRENALMREQRARYMSNDSTLASYSEPGSCYEEMLRYISHLYRKFRRRLQRM
YYGWHSKRRKKVNPNGSGIGSNSGGNGHGQGSSRGSGPGTALWLRPIHNLLQHHQHQHCH
LSNGGQHTVNATIAEHMDQEGHAEGVEVLEMKTLSVPRGSTNGSGGENPAVVSQGMGALL
GRLNGGMNYPTILPSFVCSYSSKTPPPHSKQCGRSPEQHPLNHPASEHTEPSNKLYQLMG
QHSCQRLLIQLAGVVPSPLLLELLSCPLCARSLETLELELGDLEGGKGEADGVRDFQQGG
DLRGFRSLFRRRGVVACRNGAVQAWINFREKLRRIVESKYFNRGIMIAILINTLSMGIEY
HEQPDELTDVLEISNIVFTSMFVLEMGFMLLAFGLFGYIRNPYNIFDSVIVIISVWEIIG
QADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGM
HLFGCKFSQRMENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAALY
FVALMTFGNYVLFNLLVAILVEGFQAEGDANRSESDDEKKSDNFDEDDKVEQLRDTELKM
YSLMMTANGHIDPRGTMAPPIIMHTAATPMPTPKSSLGPESILEEELMYREGRTQHGEAG
LGVSETGGGRAESRRGSSASMDPAAFDLHSLTLSSPGRRSPLPLRGSISSWGSRRSSWNS
LGRAPSLKRRDTSGERESLLSGEGGEEEECQEQQEEAGVHSKVKLESLEPLQASSLCPTI
IAEYGDCNGRTVTYDPNGNSEPKDFTSDDDLDEDSPFCYWVRKELHNMKPRWCKEHESWT
LYLFAPESPVRVWCQAVITHKLFDHVVLVFIFLNCITIALERPDIPPHSPERVFLSVSNY
IFTVIFLAEMAIKVVALGFCFGNQTYLQSSWNVLDGVLVFVSLVDILVSLAYTGTNRILG
ILRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFK
GKFYHCEGLDTKNVTNRSDCELANYKWIRRKYNFDNLIQALMSLFVLSCKDGWVNIMYDG
LDAVGVNQQPVRNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLR
EEKRLKMIDKKRRSKENGGAEAKQRPYYADYSPLRLTIHTLCTSHYLDLFITFIICINVF
TMSIEHYNQPQYLEEVLKYCNYVFTIIFVIEALLKLVAFGFHRFFKDRWNQLDVGIVALS
ILGITLEELKMKAALPINPTIIRIMRVLRIARVLKLLKMAKGMRALLDTVMQALPQVGNL
GLLFMLLFFIYAALGVELFGKLECSDSNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNG
IMKDTLRDCQPDEIHCLSYLPWVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKE
DAEMDAEIALEMEVERQRRQSTGSNNSSVGGTYIGPCPNSPEEEEEQQYNDQNLLSSGKM
SVSRMHSLPNDSYMFQPVRPASAPYPTKEVDASSQHQHAVSVMSIQSQPCESRSLLQVPD
ASPLHPQSTPTLTLPRIAPPTPGPSPRALHRQGAVKVDSVESQSCEQQERSSSAHLPPQS
PSSLSPLPPLPPSPSALSFHPYTPSPSSLPPSPSSLLPLPSPPSFLLPPPPSPRLPSRSS
SLRRPRAPSAISLSDPADAEVYHITSSACHRWRDADGGEQENGRKAGRSHSLSPYASPLS
LDLIPTLPPPSNRSTLSLHGAGSKDVKKGFSVDLHGFLEKPQLELAGHSDDQRRHSIEVC
LPQALITTDSQNFMLETHRPEKGAQAFPVRVQSVGGRQRKKKTSPPCISIHPPPEREQRL
LPSPPKLADCSMTLRRRTSSNDFTQHSQDTPAETQLRAHMQTTLTPIAAPLRPHSPTHTL
TPSQGSAPTHAQAHTPPPTHIPISPNVFIQPHAPLLPTVMPFSQTVARHSPLAGDCIPLP
RFTFDQPQSRYTGEPESVACSSPFDNRLGSSPGFSAKNRRTAQ
NT seq
7512 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaagggagagtgcgctttcagtacgaagcgtgccaggagcagggcgag
gtacaggaggacgtgaggctttctgtatcagcgggccacaggaccgacgccccagatcac
aatggtgacccaaaaggacaaagaggaggaggctgggaagaggagcagaagcagcaggag
gaagagaaggaggaggcggtggagaagaagaggagagggagctgtggcggtcgaggacaa
aggagagatgagtggagcgtcgaagttcaggaatgcgaggaggaccaggagccagagctg
gaaatggaagctgggcctacgctgggagtccgcatcacagctccaatccgcgacccggac
tgcgtgtccgaggaggaggagcagcagccgtatccggccctgactcctgtggccttcttc
tgcctgaagcaaacaacgaggccccgcaactggtgtcttcgcatggtctgtaacccgtgg
ttcgagcacgtgtccatgctggtgatcctgttaaactgtgtgactctggggatgtttcaa
ccctgcgaggatgtgacctgcctgtcagagtggtgccgcatcttacaggtgttggacgat
tgcatctttgctttctttgcggtggagatggtcatcaagatggtggcccttggaattttt
ggccccaattgttacctcggcgacaagtggaaccagctcgactttgttattgtcatggca
ggggtgatggagtattctctggatggccacaatgccagtctgtcagccatccgtactgtt
cgagtgcttaggccactgcgggcaatcaacagagtaccaagtatgaggatcttggtgacg
ctgcttctggacaccttacccatgctgggaaatgtgctccttctctgcttctttgtcttt
tttatcttcggcatcgtgggagtccagctgtgggccggactgctgcgtaaccgctgcttc
ctgggagaagacataatatcactttacaaccagtccattcatccttactacatgtctgag
gacggtgaagacagcccgttcatctgctcagctccccgagagaacgggatgctgcgctgc
cgtgacgtgccgcccttcacccagggaggagaggattgctcacgtcctgctccccaccaa
agttctgttctgattggttcaccacctggagtgggcgggtcgagcaatagcagctgtgtt
aactggaaccagtattacaacgtctgccgccccggggacctcaacccccacaagggagca
gttaactttgacaacattggctacgcttggatagccatattccaggtcatcacactggaa
ggatgggtggacatcatgtattatgtcatggatgcccactccttctacaattttatatat
tttatactgctcattattgtgggctctttcttcatgatcaatttgtgcctcgtggtcatc
gccacccagttttctgagacaaagcaaagagaaaacgccctgatgagggagcagcgtgct
cgctacatgtcgaatgactcaactctggccagctacagtgagccaggctcgtgctatgag
gagatgctgcgatatattagtcatctatacaggaagttcaggcgcaggctgcagagaatg
tactatggatggcacagcaaacgacgcaaaaaggtgaaccctaacggcagtgggattggc
agcaacagtggtggaaatggacatggccaaggctccagcagggggtcgggacctggcact
gcactgtggctgaggccaattcataacctcctgcagcaccatcagcaccaacactgtcac
ctcagcaacggagggcagcacacagtgaacgctacaattgctgagcacatggaccaggag
ggccacgctgaaggagtggaagtgctggagatgaagaccctttctgttccgaggggaagt
acaaacggaagcggcggcgagaatcctgccgtcgtctctcagggaatgggagcactgctc
gggcgactgaatgggggcatgaattatcccaccattctgccgtcttttgtgtgcagctac
agcagcaaaacaccacctccccactcgaagcagtgcgggcgcagtccggagcaacaccca
ttgaaccacccagcgtctgagcacacagagccgtcgaacaagctttaccagctcatgggg
cagcacagttgccagaggctgttgatccagctggcaggcgtcgtgcccagccctctgctt
ttggagctacttagctgccctctgtgtgcccgcagccttgagaccctggaactggaacta
ggagacctggaggggggcaaaggagaggctgatggagtccgtgactttcagcagggggga
gatctacgtggattcagaagtctgttccgacgccggggggttgttgcgtgcagaaacgga
gctgtccaggcctggataaacttcagggaaaaattgaggagaatagtggaaagcaaatac
ttcaaccgggggattatgatcgccatcctcatcaataccctcagcatgggaatagagtac
catgaacaacccgacgaattgactgatgtgttggagattagcaacattgttttcaccagc
atgtttgtgctggagatgggcttcatgctgctggcttttgggttgtttggatacatcaga
aacccttacaacatctttgacagcgtcatcgtcatcataagtgtgtgggagataataggt
caagcggatggagggttgtcggtcctgcggacatttcgcctgctgcgagtcctgaagctc
gtacgctttctacctgccctgaggaggcagctggtggtgctgatgaagaccatggacaat
gtggccaccttctgcatgctgctgatgcttttcatcttcactttcagtatacttggcatg
catctgtttggatgtaaattcagtcaaagaatggagaacggagacaccattcctgatcgc
aaaaactttgactcgcttctctgggccattgtcactgtattccagatccttacccaggag
gactggaacgttgtgctgtacaacggcatggcttctacctctccgtgggcggctctctac
ttcgttgctctcatgacgtttgggaattatgtgctcttcaatttattggtcgccatcttg
gtcgaaggcttccaggctgagggtgatgccaaccgatcagagtcagacgatgaaaagaaa
tctgacaattttgatgaggacgacaaagttgaacaactcagagacactgagcttaagatg
tactctctgatgatgacagccaatggtcacattgaccctcgtggcactatggctcctccc
ataataatgcacacagctgcaactcccatgccaacgccgaagagctccctagggcctgag
tccatcttagaggaggagctcatgtacagagaagggagaactcaacatggagaagctgga
ctgggtgtttcagagacgggaggtggccgcgcggagtctcggcgtggaagctcagcatcc
atggacccagcagcctttgacctgcattctttaactctctcaagccctggacggcgctca
cctctccctctccgtggttccatcagctcatggggaagtcgccgctccagctggaacagt
ctagggagagcaccgagcctcaaaaggcgagacaccagcggagagagggaaagtttactg
tctggagaaggcggcgaggaggaagagtgccaagaacaacaagaggaagctggggtacac
agcaaagtaaagctggagtccttggaaccgctgcaggcatcttctctctgccctaccata
atagcagagtatggcgactgcaatgggaggactgtgacatatgacccaaatggaaactcg
gagcccaaagacttcacgtcagatgatgacttagatgaagatagtcctttctgctattgg
gtcaggaaggagctccacaacatgaagccccgctggtgtaaggaacacgagagctggacg
ctctatttgtttgcacctgagagcccagtccgtgtgtggtgccaagctgtgatcactcac
aaattgttcgaccatgtggttctggttttcatcttcctcaactgcatcactatcgctctg
gagaggcctgatattcctcctcacagcccggagcgagtatttctaagtgtgtccaactat
attttcactgtgattttcctagcagagatggccatcaaggttgttgctcttggtttctgc
tttgggaatcaaacctaccttcagtccagttggaacgttttggacggagtgttggtcttt
gtgtctctggtggacattctagtttctctggcctataccggcaccaacaggatcctgggg
attctcagagtccttcgtcttctacgcacccttcgccctctgagggtgatcagtcgtgcc
ccaggactgaagctggtcgtggagacgctcatcacttctctgagacctattgggaacatt
gtattgatctgctgcgccttcttcattgtgtttggaatcttgggggtccagctgttcaaa
gggaagttttaccactgtgagggtctggacacaaaaaacgtcacaaacaggtcagactgt
gaactcgccaactacaagtggatacgaaggaagtacaattttgacaacttgattcaggct
ttgatgtcgttgtttgtgctgtcgtgtaaggatggttgggtcaacatcatgtatgatgga
ctagatgcagtcggagtgaatcagcagcctgtgaggaaccacaacccctggatgctgctc
tacttcatctccttcctgctcatcgtcagcttctttgtcctcaacatgttcgtcggtgtc
gtggtggaaaacttccacaagtgtcggcaggaccaggaggaggaggaggcccgtttacgg
gaggagaagaggctcaaaatgatagataaaaagcgcaggagtaaggagaatggaggggct
gaggccaagcagagaccgtactacgccgactactctcctctgcgcctgaccatccacact
ctgtgcacaagccactacctggatctcttcatcaccttcatcatttgtatcaacgtcttc
acaatgagcatcgagcactacaatcagccacagtatttggaggaggttctgaagtactgc
aactacgtgttcaccattatctttgtcatcgaggctctgctcaaacttgtggcctttggc
ttccatcggttcttcaaagacaggtggaatcagctggatgttggaatagttgccttgtcg
attttgggaatcactctggaagagctgaaaatgaaagctgctttgccaataaaccctacc
atcatccgaatcatgagagtactgcgcattgcacgagtcctaaaacttctgaagatggca
aagggaatgagagctctcctggatactgtcatgcaagcccttccccaggtgggaaatctt
ggtctcctcttcatgttgctcttcttcatctatgctgccctgggagtggaactcttcggc
aaactggaatgcagcgacagcaacccgtgtgaagggctgagccgtcacgcaacatttgag
aattttgggatggccttcctcacactgtttcgagtttccacaggagataactggaatggg
attatgaaagacactttaagggattgccagccagacgaaatccactgtttgtcttaccta
ccctgggtgtctccaatttactttgtcaccttcgtcctcatggcccagtttgttttggtc
aacgtggtggtggctgttttaatgaaacacctggaggagagcaacaaggaggccaaagag
gacgcagagatggatgcagaaattgcactggaaatggaagtggagaggcaacgcagacaa
agcaccggatcaaacaacagctcagtggggggaacttatatcgggccatgcccgaattca
cctgaagaggaggaagagcagcagtacaatgaccagaacctgctgtcttcaggcaagatg
tccgtatccaggatgcactctctgccaaacgacagctacatgtttcaacccgtacgacct
gctagcgccccctaccccacaaaggaggtagatgctagttcccagcaccagcatgcggtc
tcagtgatgtcgatccaatcccagccctgcgagagccgctctctgctgcaggttccagac
gcttcccctcttcacccccagtcgactcccaccctcactttgccccgcattgccccgcca
acacccggcccctcaccacgggccctgcacagacagggggcagttaaagttgattctgtg
gagtcccaaagctgtgagcaacaggagaggtccagttcggcccatctgcctccccaatcc
ccatcgtcactctccccactgcctcctttgcccccttccccctctgccctctccttccac
ccatacacaccatctccctcctctcttcctccgtcaccatcttccctccttcctctcccg
tctcctccgtcttttctcctgcctccacccccctcaccgcgtctgccctctcgctccagc
agcctccgcaggcccagggctccgtccgccatttccctctcggacccggccgacgcagag
gtgtatcacattaccagctcggcttgccacaggtggagggacgcagacggaggtgaacag
gaaaacgggcgcaaggcaggtcgcagccactcgctgtccccttacgcctcgccgctctcc
ctcgatttgatccccacgctgcctcctccgtccaacaggagcacccttagtctgcacggg
gcaggatcaaaggacgtcaagaaaggcttcagtgtcgacctccacggcttcctggagaag
cctcaactagaactggcgggtcactcggatgaccagcggcgccactcgatcgaggtctgc
cttccgcaggccctcataaccaccgacagccaaaactttatgctggagacccatcgaccg
gaaaagggcgctcaggcctttcccgtgagggtgcaatcagtcggcggcaggcagagaaag
aagaagacgagccccccctgcatctccatccacccccccccagagagggaacagcgcctg
cttccctcgcccccgaaactggccgactgcagcatgacgctgagacgcaggacatcttct
aacgacttcacacagcactcgcaagacacacccgcagaaacgcagctccgcgcacacatg
cagacaactctgacaccgatcgccgcgccgctgcggccgcattcgccgacacacacactg
accccgtcgcagggatccgccccgactcacgcccaggcgcacacgccgcctcctactcac
attcccatcagcccaaacgtcttcatccagccccacgcgcccctcctcccaaccgttatg
cctttctcccagacggtcgcgaggcactccccactcgcaggagactgcatccccctcccc
cgattcaccttcgaccaaccgcagtccaggtacacgggcgagcccgaatccgtcgcctgc
tcttcccctttcgacaaccgactgggaagcagtccaggtttcagcgcaaagaatcggagg
accgcccagtga
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integrated database retrieval system
