Gambusia affinis (western mosquitofish): 122822841
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Entry
122822841 CDS
T07758
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04020
Calcium signaling pathway
gaf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122822841
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122822841
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122822841
Ion channels [BR:
gaf04040
]
Ligand-gated channels
Glutamate (ionotropic)
122822841
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GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
122822841
NCBI-ProteinID:
XP_043957740
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All DBs
Position
LG20:complement(12819848..12873038)
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AA seq
1386 aa
AA seq
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MAIPRRPPPPHSPWPPVLLLVLLLPPLQARPLLVHSSINVAVVFSGSSYQNEVRGRLSGE
NFADLPVVVSPVTVLVNDTNPRDLLTHLCDTMATEKLHGVVFEDDVGSGADAQVAEVAQI
LDFLSTQTALPIVGISGGSAVVIPYKAEGSSFLQMGASLEQQVICMFKILEEYDWAEFAV
ITSLMPGYDTFVDIVQSYTDTSYFLWNLQDIMSLEMSVGANDLKTKRMLQQLDSQVLLAY
CSHEEAQYLFRLAGELGLLGPGYIWILPSLAVGNPNSPPPATFPVGVIGVITDQWRKSLR
QRVREGVAIVAKGAESFKKVYGFIPEGHGDCSKPAKQSENNTLFRHMLNVTWEQKDLSFN
NQGFLSNPSMVIIALDRERLWDKVGTFARGILQVRYPIWPRYGSFLEHISDDRHLTVATL
EEHPFVMVENVDPGTGTCVRNTVPCRRQSNHTDSSVQSESYTKLCCKGFCIDILKKLSKT
IKFSFDLYLVTNGKHGKLVHGIWNGMIGEVFYRRADMAIGSLTINEERSEIIDFSVPFVE
TGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSLVS
AKAPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTANLA
AFMIQEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMMKYNQ
KGVEEALESLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALEKDSR
WKRPIDLALLQFLGDGDTERLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGL
SLLVFAWEHLLYWKLRHSLHKSHKLDFLLAISRGIYSCFKGVEDPGRSSGLAKPDLTSNY
AQANMLKMLRTAKDLVSTANVESSLDNATKTIEQLTRHGSSMPVRVPQVTTEAVPGGFAY
VAENHCSIPQGSLTPPLTGITSLKQHRGVSRPTPLRYTLPTRSTSCLYDRPLPVSSLSTP
HLAVGETLPHQHPHYYQTTGRVYVDSHSHSPYITYSELQLPDIYTSHPVSLPQNQHIQLG
LSQPKRRSKSFQCENGEVERRKHGDQGKCDKSTISLTELKANHLQENHISAPSVDNVYSG
EGMCPRVENYSSWPPEDLVLRGRRRHRRPSFLKATWGNDQIHHLDESQSSLSSQSPSTLP
DLFPCIVTPTTSAKPYNPAHVRNNLCLPRNQAYLHIREDQRRPNGRKGQRLRYSQSTHLP
TYGEAVRNGNGLGRGMVRRATSLLSRQYTHYLNSYPGLPIYHSPLDLQHHSQSSSPVCQL
LACGGGRCGGQRTLLYQDNVYGAYGAYQGPQPGSEAQLGQGGTGQPVGSPCVLRPWRRVS
SLESEV
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atggccatacccaggagacctcctcctcctcactctccttggcctccagttttgctgctt
gtcctgctcttacccccactgcaggctcggccactgcttgtccactcgtccattaacgtg
gcggtagtgttcagtggctccagctatcagaacgaggtcaggggtcgccttagtggggag
aacttcgccgatctgccagtggtagttagccctgtgaccgtgctcgtcaacgacaccaac
ccccgggacctgctaacgcatctctgcgacacgatggcaacagagaaactgcatggggtg
gtgtttgaggacgatgtgggctcaggtgcagatgctcaggtggcagaagtggcacaaatc
ttggacttcctctccacacagacagctctgccaattgtgggcatcagtggtggctctgca
gttgttattccatacaaggctgaaggatcctcctttctacagatgggagcttctttggag
cagcaggtcatctgcatgttcaagatcttggaggagtatgactgggcagagtttgctgta
atcaccagcttgatgccgggctacgacacatttgtggatatagttcagtcctacacagac
acatcctactttctctggaatctgcaggatatcatgtctctggaaatgtcggttggtgcc
aatgatttgaagaccaaacgcatgctgcagcagttggactcccaggtcctgttggcgtac
tgctcccatgaggaagcgcagtacctgtttcgtctagcaggcgagttgggtctgctgggg
cccggctacatctggatcctccccagccttgccgtaggcaaccccaacagccctccacct
gccaccttccctgtaggtgtgatcggtgtgatcacggaccagtggaggaaaagcttgcgg
cagagagtaagggagggcgtcgccattgtagccaaaggggcagagagtttcaagaaggtt
tatggtttcattcctgaaggacatggagattgcagtaaaccagcaaaacagtcagagaac
aacaccctcttcaggcacatgctgaatgtaacgtgggaacaaaaagacctgtcattcaac
aatcaaggctttctctccaacccttctatggtcatcattgctttggaccgcgagagactg
tgggacaaggtgggcacgtttgctcgcggcatccttcaggttcgctaccccatctggccg
cggtatggcagcttcctggagcacatatctgatgatcgccatctgacggtggccaccctc
gaggagcatccttttgtcatggtcgagaacgtggacccaggaaccggcacatgcgtccgc
aacactgtgccctgcaggcgtcagtccaatcacacagacagcagtgtccaatccgagtcc
tacaccaaactgtgctgcaaaggtttctgcatagatatcctcaagaagctatccaaaaca
attaagttctccttcgatctctacctggtcaccaacggaaagcatggcaaactggtgcat
gggatttggaacgggatgattggggaggttttctacaggcgtgctgacatggccatcggc
tctcttactatcaacgaggagcgctctgaaatcattgacttctctgtaccatttgtggag
acgggaataagtgtcatggtagcgcgtagcaacggcacagtatcgccgtctgcctttctt
gagccctacagtccagcagtttgggtcatgatgtttgtgatgtgcctgaccgtcgtggct
gtgactgtgtttgtgtttgaatatttcagcccagtgggctacaaccgcagtctggtaagc
gccaaagctccgggtgggccgacgttcacgatagggaaatcagtgtggctgctgtgggga
atcgtcttcaacaactccgtccccattgaaaaccccaaaggaaccaccagtaaaatcatg
gtcctggtttgggccttcttcgctgtcatcttcctggcttcttacaccgccaacctggct
gctttcatgatccaggaacaatatattgacaccgtgtctggcctttctgacaagaagttt
cagaaaccacaggagcattatcctccttttcgcttcgggacagttccaaacgggagcact
gagaggaacattcgcagcaactatcccgatatgcacacacacatgatgaaatataaccag
aagggggtggaagaagctctggagagcctcaaaaccggaaaactagatgctttcatctac
gatgctgctgtcttgaattacatggcgggtaaagatgagggttgcaaactggtaaccatt
ggcagtgggaaagtgtttgccaccacaggatatggcattgctttggaaaaagactcccgc
tggaaacgaccaattgacttggcattgctacagtttcttggagatggagacacagaacgc
ctggagacggtttggctttctggtatctgccagaatgagaaaaacgaggtgatgagcagc
aagttagacattgacaacatggctggtgtcttctacatgcttctggtagctatgggcctc
agtctgctggtcttcgcctgggaacacctgctgtattggaagttgcggcactctctccat
aagtctcataaacttgacttcttgttggccataagcaggggtatttacagttgcttcaaa
ggagtagaagatccaggacgttcatctggtttggccaaacctgatctgacctccaactat
gctcaagcaaacatgctaaaaatgcttcgcactgccaaggatctggtctccactgcgaat
gttgagagctccctggacaatgctaccaaaaccatagagcaattgactcgtcatggtagt
agtatgcctgttcgtgtccctcaagtcaccactgaggccgttccggggggatttgcttat
gttgctgaaaatcactgctccattcctcaggggtccctcacaccacctctaactggcatt
acctctttgaaacaacacaggggtgtaagtagaccaacaccactgcgctacacacttcca
actcgttcaacatcgtgtctgtatgacaggccacttcctgtgtccagtttgagcacccct
cacctggctgtaggggagacactccctcatcagcacccacactactaccagactacaggg
agggtttatgtagactcccattctcactccccttacattacctactcagaactccaacta
cctgacatttacacatctcatccagtctctttaccccaaaaccaacatatccaattgggc
ctttcacaaccaaaaaggaggtccaagagttttcagtgtgagaatggggaagtggaaagg
agaaaacatggggatcagggtaagtgtgacaaaagcactatcagtctgactgaacttaaa
gccaatcacctccaagagaatcatatctctgccccaagtgttgacaatgtttactcagga
gaggggatgtgtccccgggtggagaattatagctcttggcctccagaggaccttgtgctg
aggggtcggcggaggcaccgccgaccctcttttcttaaagcaacttggggcaacgaccaa
attcatcatcttgatgaatcacagtcttctttatccagccaatcaccttcaaccttgcca
gacctgtttccatgcattgttactcctacaacatctgccaagccttacaatcctgcccat
gttcgaaataacttgtgcctcccaaggaaccaggcctacctccatataagggaggaccag
aggaggccaaacggacgaaagggccagaggctgcgctactcccaatccacccacctccca
acatatggagaagcagttcgaaatggaaatggtttagggcggggtatggtccgcagagcc
acaagcctgctcagccgacagtacacacactatctgaactcataccccggtctcccaatc
tatcacagtccactggacctccagcatcacagccagagttccagcccagtatgccagctg
ttggcctgtggtggtggacgatgtggtggacagcggacactgctgtatcaagacaatgtg
tatggagcgtatggggcctatcagggaccccagcctggctcagaagcccagctagggcaa
ggaggaacaggacagcctgttgggagtccttgtgtacttcggccttggcgacgagtttcc
agtctagaatccgaagtctga
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