Gambusia affinis (western mosquitofish): 122829069
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Entry
122829069 CDS
T07758
Symbol
grin2bb
Name
(RefSeq) glutamate receptor, ionotropic, N-methyl D-aspartate 2B, genome duplicate b isoform X1
KO
K05210
glutamate receptor ionotropic, NMDA 2B
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04020
Calcium signaling pathway
gaf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122829069 (grin2bb)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122829069 (grin2bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122829069 (grin2bb)
Ion channels [BR:
gaf04040
]
Ligand-gated channels
Glutamate (ionotropic)
122829069 (grin2bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
122829069
NCBI-ProteinID:
XP_043969229
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All DBs
Position
LG04:10454350..10577687
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AA seq
1753 aa
AA seq
DB search
MFKGRHLQFSTMLVSLHHSPSHLQDKCLVSPSSTQHSPPLDQSCHHSQRQPRLTLPFLSL
SLSLLLLSILLLPICEPRRVGGPGTGPGGSPGGQGGQRGGGNQRGAVIPPHYSPGSPALP
PNAPKLISSLSIAVILVGNSSEVTLGAGLEKEDFLHIPYPPKVEVVTMNETDPKSIINRI
CAQMMRNSLQGVVFGDDTDQEAIAQILDFISAQTHIPILGIRGGSSMVMAAKDDHSMFFQ
FGPSIEQQASVMLNIMEEYDWYIFSIVTTYYPGYQDFINKVRSTIENSFVGWELEEVIIL
DMSVDDGDSKIQNQMKKLQSPVILLYCTKEEATTIFEVAHSVGLTGYGYTWIVPSLVAGD
ADHVPSVFPIGLISVSYDEWDYNIEARVRDAVAVIATATSTMMLDRGKQTLQKSSCLGTP
DKKGSSIGHSKEILKYVMNVTFEGRNLSFSEKGHQMFPKLVIILLDKDRQWDRVGKWERG
SLTMRYHVWPHFEEEREDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKLSNHT
GDSGIYIKRCCKGFCIDILKKIAKTVKFTYDLYLVTNGKHGKKVNGTWNGMVGEVVTKNA
HMAVGSLTINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLEPFSADVWVMMFVML
LIVSAVAVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAVWLLWGLVFNNSVPVQNPKGT
TSKIMVSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQKPNEFSPPFRFGTV
PNGSTERNIRNNYRDMHAYMTSFHQKNVDEALYSLKTGKLDAFIYDAAVLNYMAGRDEGC
KLVTIGSGKVFASTGYGIAIQKDSGWKRAVDLAILMLFGDGDMEEFEALWLTGICHNEKN
EVMSSQLDVDNMAGVFYMLGAAMILSLITFICEHLFYWQLRFCFMGVCSGKPGVTFSISR
GIYSCIHGVQIEENKSTIDSPSSTIKKNMNNTHSNILRLLRTAKDMTAVPGINGSPHAAL
EYSHSSREAAIYDIQKHRHSLVGHPADCKSAPPYLPEDPMFSDYISEVERTFGNLPLKDS
NLYQDHYRHHHPASALGMSGPPPNRPRSLGSASSLEGGMFDADSLGGGVAPIFTTQPRPS
MTHRNTSKFDLIAGHTAADTNQGGFKGSNVYGRFSFKGGASSTGLIGGHDRYCGGGGGGS
GGDDGNIRSDVSDISTHTVTYGNLEGSTKRRKQYRDSLKKRPASAKVRREQDEIELNAFR
KRPHHHTVHHHFPHGPLAHRPVSPPLERKRGGGTGNSSPYIFRKDKDNLRDFYADQFRSK
EGKAKWEQEGGSGGSGAGGGSGGGICKSLVPVEDFLKGKGKKTECKGGIGGMSAGQQAHT
CWEKGISGLGGGGIAGGDWECRNCHTVCHHSGGGGSTCSASGVGGSGSRPSSATLCKRCD
SCKIQPSNLYNISEDNNMIFSGVKSSIGPSQTQTQTQRRKLGPGGKVLRRQHSYDTFVDL
QREGAGRMGGVGGGIGGQFVQPRSVSLKEKDRYMEGPSPYAHMFERYSGERESPMFGGIG
GDRAAGGSSFSLYRGGEGGLHRRSVGERDLRDRDRNMMGGGGCGGGGGNRGAGTYSLSKS
LYPDKVNQNPFIPTFGDDQCLLHGAKPYYIKKPQTQQQQLLNNSRGGGDFRGSMGATSYL
PASATAGVMSNVATRYPKELCLGGVGGPMGNHHGANKLLSGGRDTLGLGQGQRPFNGANG
HVYEKLSSIESDV
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagggacggcatttacaattctccacgatgcttgtcagcctccaccattctccc
tcccatcttcaggacaagtgtttggtgtctccctcctcaactcagcactctcctcctttg
gaccagtcgtgccatcactctcaacgccagccacggctcaccctgccctttctgtccttg
tccttgtctctgctcctactctccatactcctgttgcccatctgcgaaccccggagagtt
ggagggccaggaacggggcctggaggttccccaggtggacaaggaggtcagagaggaggc
gggaaccagaggggtgctgttatccctcctcattactctccaggttcgccagcacttcct
cctaacgcccccaaactgatcagctcacttagcattgccgtcatcctggtgggcaattcc
agtgaagtaacccttggtgcaggacttgagaaagaggacttcctccacatcccttacccc
cctaaagttgaggtggtcaccatgaatgagacggacccgaagagcatcattaaccggatc
tgtgcgcagatgatgaggaactctctacaaggcgtagtgtttggtgacgacacggaccag
gaggccatcgctcagatcctggacttcatctctgctcagacacacattcccatcctgggg
atccgaggggggtcctccatggtcatggctgccaaggatgaccactccatgttcttccag
tttggcccctccatcgagcagcaggcgtccgtcatgttgaacattatggaggagtatgac
tggtacattttctctatcgtcaccacatactaccccgggtaccaggactttatcaacaag
gtacgcagcacaattgagaacagctttgtgggttgggagcttgaagaagtcatcatatta
gacatgtctgtggatgatggagactccaagatccagaatcagatgaagaagctgcagagt
ccagttatcctgctctactgcaccaaggaggaagcgaccaccatttttgaagtggcccac
tccgtaggcctgacaggttatggctacacctggatcgtaccttcgctggtggccggtgat
gcagaccacgttccatctgtcttccctatagggctcatctctgtgtcatatgacgaatgg
gactacaacatcgaggccagagtacgtgacgcagttgctgtcattgccacggcaacctca
accatgatgttggaccgagggaaacagaccctgcagaagtccagctgcctcgggacgcct
gacaaaaagggctccagcatcggccactccaaggaaatcttgaagtacgtcatgaatgta
acatttgaaggtcgaaacctgtcatttagcgaaaaaggccaccagatgttccctaaactc
gtcataatacttctcgacaaggaccggcaatgggacagggttggcaagtgggaaagaggc
tcgttgacgatgaggtaccatgtgtggcctcatttcgaggaggagcgggaggaccacctg
tccatcgtgactctggaggaggcaccttttgtcattgtggaggacgtggatccactcagt
gggacatgcatgaggaacactgtgccgtgtcggaagcagctaaaactcagcaatcacaca
ggcgattcggggatttacatcaaacgctgctgtaaaggcttctgtatcgacatcctgaaa
aagattgcgaaaactgtcaagttcacttacgacctgtatttagttaccaatggtaaacac
ggcaagaaggttaatgggacctggaacggcatggtgggagaggtggtgacaaagaatgcg
cacatggccgtcggttccctcaccatcaacgaggagaggtcagaggtcattgacttctcc
gtgccgttcatcgagacgggtatcagtgtcatggtctcccgcagcaacggcaccgtctcc
ccctctgcctttctagagcccttcagcgctgatgtctgggtcatgatgtttgtgatgctg
ctcatcgtctcggccgtggctgtctttgtgttcgagtacttcagcccggtgggttacaat
cgctgtctggcagacggacgagagcccggcggtccctccttcaccatcggcaaggccgtc
tggctgctgtggggcctggttttcaacaactccgttcctgtgcagaatcccaaaggcacc
acgagtaagatcatggtgtcagtgtgggccttcttcgctgtcatctttctggcctcctac
actgccaacctggctgccttcatgatccaggaggaatatgtggaccaggtgtcgggcttg
tcagacaaaaagttccagaagccgaatgagttctctccgcctttccggtttggtacggtg
cccaacgggagcacagagcgcaacatccgcaacaactacagagacatgcacgcctacatg
accagcttccaccagaagaatgtagatgaagccctgtacagcctgaagactgggaaactg
gatgccttcatctatgacgcagcagtgctaaactacatggctggcagggatgagggctgt
aagctggtaaccattgggagcggcaaagtgttcgcctccacaggctacggcatcgccatc
cagaaggactcgggctggaaacgagctgtggatctggctattctcatgttgtttggagat
ggtgatatggaggagttcgaggccctgtggctgacaggaatctgtcacaacgagaagaac
gaggtgatgagcagccagctggacgtagacaacatggcaggggtcttctacatgctcggg
gctgccatgattctgtcactgatcaccttcatctgtgaacatttgttctactggcagctg
cgtttctgcttcatgggcgtgtgctcggggaagcccggggtcacgttctccatcagcaga
ggtatctacagctgcatccatggggtacaaatcgaggaaaacaagtcaaccattgactca
ccatcttctaccataaagaagaacatgaacaacacccactccaacatcctacggttactt
cgaactgctaaggacatgactgcagtcccaggcatcaatggctctccacatgcagcccta
gagtatagccacagtagccgtgaagcggccatatatgatatccagaagcaccggcacagc
ctggtgggtcaccctgcagattgtaagtctgctccaccctatcttccagaggatcccatg
ttcagtgattatatcagcgaggtggagaggacttttggcaacttgcccctgaaggacagc
aacctctaccaggaccattaccggcaccaccacccggcctcagctctgggtatgtccggc
cccccacccaataggccgcgtagcttaggcagcgctagctcgttggaaggtggcatgttc
gatgctgacagtttggggggaggggtagcgcccattttcaccactcagccccgcccctca
atgactcacaggaatacaagtaaatttgacctgattgcaggccacaccgctgcagatacc
aatcagggtgggttcaaaggaagcaatgtttacgggaggttttctttcaaaggaggagca
tccagcactgggctcatcgggggacacgacaggtactgtggtgggggagggggaggctca
gggggtgacgatgggaacattcgctctgatgtgtcggacatctccacgcacactgttacc
tatggaaacctggagggcagcaccaagaggcgtaagcagtacagggacagcctgaaaaag
aggccagcctccgcgaaggtcagacgggagcaggacgagatagagctgaacgccttcagg
aagagaccccaccaccacaccgtccaccaccactttccccatgggcctctggcacaccgc
ccggtctcacctcccctggagcggaagagaggaggaggaacgggtaattcttcgccttac
atattccgcaaagacaaagacaacctgagggatttttatgcggaccagttccgctccaag
gagggcaaggccaagtgggagcaagagggtggaagtggaggaagcggtgcaggcggtggt
agtggtggtggtatctgtaaaagcttagtgcctgtggaagacttcctcaaaggtaaaggg
aagaaaacagagtgcaaaggtgggattggtggaatgtcagcagggcaacaggctcatact
tgctgggagaaaggaatttctggccttggagggggaggaatagcagggggtgattgggag
tgtcgcaactgccacaccgtttgccatcacagtggaggaggaggcagcacatgctcagct
agtggagttggggggagtggcagtcgccccagctctgctacgctctgcaaacgctgtgac
tcctgcaagatacagccaagcaacctttataacatcagtgaggataacaacatgattttt
agtggtgtgaagagcagcataggacctagtcagacacagactcagacacagcgcaggaag
ctagggccaggtgggaaagtgttacggaggcagcactcttatgatacatttgtagatctg
cagagagagggagctggtcgcatgggtggggttggaggtggtattggtgggcagtttgtt
cagccccgaagtgtgagtttgaaagaaaaagaccgttacatggagggccccagtccctat
gcacacatgtttgagagatattcaggtgaaagggaatctcccatgtttggtggcataggt
ggggatagagcagcaggagggtcctccttcagtttgtaccgtggaggagaaggtgggttg
catcgacgttcagtgggggagagagacctgagggacagagacagaaatatgatgggagga
gggggctgtggtggtggtggtggtaacagaggggctgggacttactccttgtctaaatct
ctctacccagataaggtgaaccagaaccccttcatcccaaccttcggtgacgaccagtgt
ctattacacggtgccaaaccgtactacatcaaaaagccacagacgcagcagcagcaactt
ctcaacaacagccgaggaggaggggacttccgcggctccatgggagcgacttcctatttg
cccgcatctgccacagctggggtgatgtccaatgtggctacaaggtaccccaaagagctg
tgcctgggtggggtgggagggcccatggggaaccaccacggcgccaacaaactgctgtcc
ggaggcagggacacgttaggtctgggacagggacagagacccttcaatggtgccaatgga
cacgtttatgaaaagctctcgagcattgagtcagatgtctga
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integrated database retrieval system
