Gambusia affinis (western mosquitofish): 122829908
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Entry
122829908 CDS
T07758
Symbol
glb1
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00052
Galactose metabolism
gaf00511
Other glycan degradation
gaf00531
Glycosaminoglycan degradation
gaf00600
Sphingolipid metabolism
gaf00604
Glycosphingolipid biosynthesis - ganglio series
gaf01100
Metabolic pathways
gaf04142
Lysosome
Module
gaf_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
122829908 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
122829908 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
122829908 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
122829908 (glb1)
00511 Other glycan degradation
122829908 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122829908 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122829908 (glb1)
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
122829908 (glb1)
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122829908 (glb1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Plectin
Motif
Other DBs
NCBI-GeneID:
122829908
NCBI-ProteinID:
XP_043970756
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All DBs
Position
LG04:complement(15064822..15072312)
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AA seq
654 aa
AA seq
DB search
MSVLRFNNVFLLLMMMMMFGHSNGRAPSFSVDYKNNCFRKDGEQFRYISGSIHYSRIPRA
YWKDRLLKMYMAGLNAIQTYIPWNYHEETPGQYNFSGDRDVEFFLKLAQDIGLLVILRPG
PYVCGEWDMGGLPAWLLKKKNIVLRSSDPDYIAAVDKWMGKLLPMMKPYLYQNGGPIITV
QVENEYGSYFACDYNYMRHLTKLFRAQLGDEVVLFTTDGAGVNYLKCGSIQGLYATVDFG
PKANLTATFAAQRHAEPYGPLVNSEFYTGWLDHWGSRHSVVSSAVVTKTLSQMLAMGANV
NLYMFIGGSNFGYWNGANSPYAAQPTSYDYDAPLSEAGDLTEKYFAIRDVIRMYSKVPEG
PIPPTTPKYAYGSVKMQKLQTVLSAVETLSFSGPVKSTYPQTFTDLNQDFGFVLYRTTLP
VNCSQPTPLSSPLNGVHDRAYVSVNGVAVGVLERNKVLSVNVTGNAGSQVDILVENMGRI
NFGKDINDFKGLVSNLNLGQTPLTGWTMYSLSIDEAVRQGLLREQSPTQRDPDQPATLSL
PAFYNGSFIIPDGIPDLPQDTYVKLPGWKKGQIWINGFNLGRYWPARGPQLTLFVPASIL
STAAPNNVTILELEADPCSSQPCTIEFTTTPIINATVLSEPKPRWRLFTKEDLL
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgctccgatttaacaacgtctttctgctgcttatgatgatgatgatgtttgga
cactctaacgggagggctccatcattcagcgtggactacaaaaacaactgcttccgtaag
gatggggaacaatttcgttacatatcaggaagcatccactacagcaggatccccagggcc
tactggaaagaccggctactaaagatgtacatggcaggactgaacgccatccagacctac
attccctggaactaccatgaagagactcctggccagtacaatttcagcggagacagagat
gtggaattttttcttaagttggctcaagacatcggtctgttggtgatccttcgtccaggg
ccgtacgtatgtggagagtgggacatggggggtctgcctgcatggcttctcaaaaagaaa
aacattgtgctgcgatcgtctgaccctgattacattgcagctgtggataaatggatgggg
aagctgttacccatgatgaagccttacctctatcagaacggaggtcctatcatcactgta
caggtggagaatgaatatggcagctactttgcctgtgactacaactacatgcgccaccta
accaaactgttcagagctcagctgggagacgaggtggtgctgttcaccacagatggtgcc
ggggtgaattacctaaagtgtggctcaatacaaggcctctatgccaccgtagactttggt
cccaaggcaaacctaactgctacctttgcagcacagcgacatgctgaaccttatggccct
ttggtgaactctgagttttacactggatggctggatcactggggatcccgtcactctgtc
gtgtcgtccgctgtagtgaccaagaccctcagccagatgctggctatgggagcaaatgtt
aacctgtacatgttcataggcgggtcaaactttggctactggaatggtgcaaactctcca
tatgctgcacagcccacaagctatgactacgacgcccctctgtcagaggcaggagatctc
acagagaaatactttgccatcagagatgttatcagaatgtacagtaaggtaccggagggg
ccgattccaccaacaacaccaaagtatgcctacggttctgttaaaatgcagaagctccag
acagtattaagtgccgtagaaacgctgtcattctcaggtccagttaaaagcacctatcct
cagacgttcactgacttaaatcaggactttggctttgttctgtacagaacgactctgcct
gttaattgcagccaacccacccctctgtcatcacctctgaatggggtccatgatagagcc
tatgtgtcagtgaacggggtggcagtaggggttctggaaaggaacaaggtcttgagtgtg
aatgtgacgggaaatgctggaagtcaggtggacattctggtggaaaacatgggccgaatc
aactttggaaaagacatcaatgacttcaagggcctggtctccaatcttaatctgggacaa
accccccttaccggctggaccatgtacagtcttagcatcgacgaggcggtcagacagggc
ctcctcagagaacaatctcccacacaaagagatccagatcagcctgcgactctttcgctt
cccgctttctataatggaagcttcatcattcctgatggtattcctgatctccctcaagac
acttatgtcaaactgccaggctggaagaaggggcagatctggattaacggttttaattta
gggcgttactggcccgctcgaggccctcagctgacactttttgtgcctgccagcatcctg
agcacagcagcacccaacaatgtgaccatcctggagctggaagcagatccatgcagctcc
cagccatgcacaattgagtttacaaccacaccgatcatcaatgcaacagtcctctctgaa
cccaaaccacgctggagactgtttactaaagaggatctcctgtga
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