Gambusia affinis (western mosquitofish): 122831318
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Entry
122831318 CDS
T07758
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gaf03016
]
122831318 (cdkal1)
Enzymes [BR:
gaf01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
122831318 (cdkal1)
Transfer RNA biogenesis [BR:
gaf03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
122831318 (cdkal1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
Glyco_hydro_120_ins
Motif
Other DBs
NCBI-GeneID:
122831318
NCBI-ProteinID:
XP_043973346
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All DBs
Position
LG05:complement(11666821..11853622)
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AA seq
564 aa
AA seq
DB search
MPSACDSLIEDIEDMVSFNDPTPHDRQSARKSILPRSRKKKELLSNEELQVDSLIPGTQK
IWMKTWGCSHNNSDGEYMAGQLAASGYKITEDSAEADLWLLNSCTVKNPAEDHFRNSIKK
AQEQQKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVQEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMKREYCIDDFRRVVDFLKDKVPGVTIATDIICG
FPGETEEDFQDTLQLVKHYQFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKKLSELFH
SYNPYDHKVGERQFVLVTEESFDAQYYVSHNKFYEQVLVPKRADFKGKMIEVDIYEAGKH
FMKGRPVEDSKPFTPSIAVPLQKGEVSGLLQEHMANGVKGAASMPPDSALLVGSYSLDRE
LLRKLGICVALAAAVLAFIIEKLY
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgccatccgcctgtgactctctgattgaagacatcgaggatatggtgtcttttaatgac
cccactcctcatgacagacagtctgcaagaaagagtattctgccaaggtcaagaaagaag
aaagagcttttaagcaatgaagagcttcaagtagacagtttgatccctggcacccaaaag
atctggatgaaaacgtggggatgcagtcataacaactcagatggggagtacatggctgga
cagctcgctgccagcggatacaagataacagaggactcagcagaagccgacttgtggttg
ctgaacagctgcacagtgaaaaaccctgcagaggatcacttcagaaattcaatcaagaaa
gcccaggagcagcaaaaaaaagtggtcgttgcaggttgtgttcctcaggctcagccccgg
atggactaccttaaaggtcttagcattattggggtccaacagattgatcgagtggtggaa
gtagtggacgaggctgttaaaggtcactctgttcgcctgctgggtcagaagaaagatggc
ggaaggagacttggaggtgcgagattggacttgccgaagattaggaagaaccctctgatt
gaaatcatctccattaacactgggtgtttgaatgcatgtacgtactgcaagacaaaacat
gctcgaggagacttggccagctatcccatagaggagctcgtggaacgagctaggcagtct
ttccaggagggagtgtgtgagatctggttgacaagtgaagacactggtgcttacggcaga
gacatagggacagacctgcctacattactgtggagattagtgcaggagatacctgaagga
gccatgctgaggctgggcatgaccaaccctccttacatcctggaacacctggaggagatg
gcaaagattttaaatcacccacgtgtttatgccttccttcatgttcccgtgcagtcggcc
tcagacagtgtcctgatggacatgaagagggaatattgcattgatgacttcagaagagtt
gtggacttcctcaaagacaaagtacctggagtaacaattgctacagatataatctgtgga
tttcccggtgagactgaggaagacttccaggacactttacaacttgtgaaacactatcag
tttcctagtttgttcatcaaccagttttacccaagacccggtacacctgctgctaagatg
gagcaagttccagcacatgtgaaaaagcagaggactaaaaaactctctgaactcttccac
tcttacaacccctacgaccacaaggtaggagagagacaatttgtgctggtgacagaggag
tcttttgatgcgcagtactatgtttcccacaacaagttctacgaacaggtgctggtacca
aaaagggctgatttcaaaggaaagatgattgaagtggacatctacgaggcagggaagcac
tttatgaaggggcgaccagtagaagacagcaagcctttcactccctctattgccgtgcct
cttcagaaaggagaagtctctggtctgttgcaggaacatatggccaatggagtcaaagga
gctgcttctatgccacctgactctgcgctcctggtcggctcctacagtctggacagagaa
ctgctgaggaaactggggatttgcgttgcactagcagccgccgtcttggcctttattatt
gagaagctctattaa
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