Gambusia affinis (western mosquitofish): 122842252
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Entry
122842252 CDS
T07758
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122842252 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122842252 (polr1b)
Enzymes [BR:
gaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122842252 (polr1b)
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
122842252 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
122842252
NCBI-ProteinID:
XP_043991892
LinkDB
All DBs
Position
LG13:complement(25007689..25018657)
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AA seq
1134 aa
AA seq
DB search
MEPSDKWTNLPQGPSLKNLTDGGFGKLKDKQHPAVQDLTKAHIESFNQAVTEGLARVVLA
IPPLEFMFRQDKVTLAFVEASIHNPVVTKGSVCTEMKVYPAECRGRRCSYKGKLVADISW
AVNGIPKGIIKQSLGQVPIMVKSKLCNLHGLSPKELVKHHEEAEEMGGYFIMNGIEKVVR
MLIQQRRNYPIAMSRPKWKSRGQGYTQYGVSMHCVREEHSAINMNLHYLENGTVMLNFIY
QKELFFLPLGFALKALVNFTDFQIYQELIKGSEDNSFYKTCVSEMLRMVSEEGCTTRSKV
LDYLGERFRVKLSLPEWYTNEQCANFLLNECLCIHLKSDLEKFYLLCFSTRKLFSFAKQE
CMEENPDSLMCQEVLTPGQLYLMFLKERLTAWLTSVKLSFDKRGSKLTGELSTENVMKFL
TMGSDLTKPFEYLLATGNLHSKTGLGMQQNTGLCVVADKLNFIRYLSHFRCVHRGAAFAK
MRTTTVRKLLPESWGFLCPVHTPDGEPCGLMNHMTASCEVITATAYTTALPALLCSLGVT
PVDGSPGQAFSDCYPVVLDGSVVGWVEADLAPSVTDSLRRFKVLGQKKIPPWTEIVLVPK
TGKPSLYPGLFLFTTLCRMMRPVQNLALGKQELIGTFEQLYLNVGILEAEIEPGVSTHQE
LFPHSMLSVVANFIPYSDHNQSPRNMYQCQMGKQTMGFPLHSFTDRSDNKLYRLQTPQSA
LVRPYMYDHYNLDNYPSGTNAVVAVISYTGYDMEDAMIVNKSSWERGFAHGSIYKTELVD
LADKVKGEDGVVFGAKPGDPKVNGKLDADGLPHIGSVIQYGDPFYSYINLNTGQSHVNFY
RSHEACVVDNIKVCSNDTGSGRFKRVCITVRVPRNPMIGDKFASRHGQKGILSRLWPAED
MPFTESGMSPDILFNPHGFPSRMTIGMLIESMAGKSAAMHGLSHDATPFTFSEQNSALEY
FGEMLRAGGYNYYGTERLYSGLSGQELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKV
TNQPLGGRNIQGGIRFGEMERDALLAHGSSFLLQDRLFNCSDRSVAQVCMDCGSLLSPLL
EKPPPFWSAMRHRKTVCSLCGKSDSVDSVSVPYVFRYFVAELAAMNIKVKLDVK
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggagccttctgataagtggacgaatttgcctcagggaccgagtttgaagaacctgacg
gatggaggcttcgggaaactgaaggataaacagcaccccgccgtccaggacctcaccaag
gcccacatcgagtcctttaaccaggctgtcaccgagggactcgctcgggtcgtcctggcc
atcccacccctggagttcatgttcagacaggacaaagtgaccctcgcctttgtggaagcc
tccatccacaacccagtggtcaccaagggcagcgtctgcaccgagatgaaggtttaccct
gcagagtgccgaggcaggaggtgctcctacaaaggaaagctggtggcggacatcagctgg
gcggtcaatggcatcccgaaaggcatcatcaaacagtccctgggtcaggtgccgatcatg
gtgaagtccaagctctgcaacctccacggcttgtcgcctaaggagctcgtaaagcatcat
gaagaggcagaggaaatgggaggttacttcatcatgaatggcatcgagaaggtcgtccgc
atgctgatacagcagaggaggaactatccgatcgccatgtccaggcccaagtggaagagc
cgtggtcagggatacactcagtacggtgtatccatgcactgcgtgagggaggagcactcg
gccatcaacatgaacctccactacctggagaacggcaccgtgatgctgaacttcatctac
cagaaggagctgttcttcctgccgctcggcttcgctctgaaggctctggtgaacttcaca
gatttccagatctaccaggagctgatcaaaggcagcgaggacaactctttctataagacc
tgcgtgtcagaaatgctgcgcatggtgtcggaggagggctgcaccacccgcagcaaggtg
ctggactacctgggcgagcgcttccgggtcaagctgagcttaccggagtggtacaccaac
gagcaatgcgccaatttcctgctaaacgaatgcctctgcatccacctgaagtcggacctg
gagaagttctacctgctgtgcttctcgacccggaagctcttcagtttcgccaagcaggag
tgcatggaggagaacccggacagcctgatgtgccaggaggttctgactccgggtcagctc
tacctcatgttcctgaaggagagactaacggcgtggctaacgtcggtgaagctgtccttc
gataagcgagggtccaaactgaccggcgaactgagcactgagaatgtgatgaagttttta
actatggggtcggatttaaccaaaccgtttgaatatctgctggccaccgggaacctgcac
tccaaaacaggtctcggcatgcagcagaacacgggcctgtgcgtcgtggccgacaagctg
aacttcatccgctacctgtcgcacttccgctgcgtccacagaggagccgccttcgccaag
atgaggacgacgacggtcaggaagctgctgccggagtcctggggcttcctgtgtccggtc
cacacgccggacggcgagccctgcggcctcatgaaccacatgacggcgagctgcgaggtc
atcaccgccaccgcctacaccaccgcgctgccggctctgctctgctcgctgggtgtcacc
ccggtggacggttctccgggtcaggccttctctgactgctaccccgtggttctggatggc
tccgttgtcggttgggttgaagctgatttggctccatccgtcaccgactcgctgcgccgc
tttaaggttctgggacagaagaaaatccctccctggactgagatcgtcctggttcctaaa
accgggaagcccagtttgtatccgggcctgttcctcttcactacgctgtgccgcatgatg
cgacccgtccagaatttggctcttgggaagcaagagctgattggcacgtttgaacagctg
tacctcaacgtggggatcctggaggcggagattgagccgggtgttagcacgcaccaggag
cttttcccccacagcatgctcagcgtggtggccaacttcatcccctactccgaccacaac
cagagccccaggaacatgtaccagtgccagatggggaagcagacgatgggattcccgctg
cactcgttcacggatcgctctgacaacaagctgtaccggctccagacgccgcagagcgct
ctggtccggccctacatgtacgaccactacaacctggacaactacccgagcggcaccaac
gccgtcgtcgccgtcatctcctacaccggctacgacatggaggacgccatgatcgtgaac
aagtcgtcgtgggagagaggcttcgctcatgggagcatctacaagacggagttagtggac
ctggcggacaaggtgaagggagaggacggcgtcgtgttcggggccaagccgggcgacccg
aaagtgaacgggaagctggacgcggacgggctgcctcacatcgggtcggtgattcagtac
ggagacccgttctacagctacatcaacctgaacacgggacaaagccacgtcaacttctac
aggagccatgaggcttgtgtggtcgacaacataaaggtctgcagcaacgacacgggatct
ggtcgcttcaaacgtgtctgcatcaccgtccgagtgccgcgtaacccgatgattggtgac
aaatttgccagccgccacggtcagaagggcatcctgagccgcctgtggccggcagaggac
atgccgttcactgagagcggcatgagcccggacatcctcttcaacccgcacggcttcccg
tctcgcatgaccatcgggatgctgattgagagcatggccgggaagtcggccgccatgcac
ggcctgagccacgacgccacgccgttcaccttctccgagcagaactctgcgctggagtac
ttcggggagatgctgcgcgccggtggctacaactactacggcacggagcggctctacagc
gggctgagcggccaggagctggaggccgacatcttcatcggcgtcgtgtactaccagcga
ctccgccacatggtgtccgataagttccaggtgcgcacgacgggagcacgggataaggtg
accaaccagccgctgggaggaaggaacatccagggcgggattcggttcggggagatggag
cgggacgcgctgctggcccacggctcgtccttcctgctgcaggaccggctgttcaactgc
tcggaccgctccgtggcgcaggtgtgcatggactgcggcagcctgttgtcgccgctgctg
gagaagccgccgccgttctggtcggccatgcgccaccggaagacggtgtgcagtttgtgt
gggaagagcgactctgtggactccgtgtctgttccctacgttttccgttacttcgtggct
gagctggcagcgatgaacatcaaggtgaaactggacgtgaagtga
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integrated database retrieval system
