Gambusia affinis (western mosquitofish): 122842268
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Entry
122842268 CDS
T07758
Symbol
ret
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret isoform X1
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04010
MAPK signaling pathway
gaf04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122842268 (ret)
04020 Calcium signaling pathway
122842268 (ret)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gaf01001
]
122842268 (ret)
Enzymes [BR:
gaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
122842268 (ret)
Protein kinases [BR:
gaf01001
]
Receptor tyrosine kinases (RTK)
RET family
122842268 (ret)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD1
RET_CLD4
Cadherin
Pkinase_fungal
RIO1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
122842268
NCBI-ProteinID:
XP_043991922
LinkDB
All DBs
Position
LG13:complement(25184178..25218480)
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AA seq
1137 aa
AA seq
DB search
MHLKVLGFVSSSGNFHLWFVNMEPSCGFSPGNVAALLQLLLFGGVVGLYFPQKEYTETVY
VGQPAGTPILQVHAMLDGRSERPHFYLCGSRRPPYALWFQMDVQTGELSLSKTLEETDFA
SLYQNSWPAKRLALQVMALNSVSKRAPCSRNSAHITLDFVNGSMPHCAQTDMKELCFPHR
DTSNPHIIENRFPGVLRQLRRLTRLTVCPNYTIAYGVESETPAPFAVNGNTSELVVTAPL
DREESENYRLLLVCTVQTESVVTKVETPLDVFVDDEDDNAPYVNGTDTAEVVISFNRTKG
AAFGTLFVFDRDLTTLFPKDLSHNRYVGTLLSSESWIKDTFDIKGTFSERRASPGGIRES
VYDYQLILKRNLDITENRTVFLDYLVNDTTYPGLEGTVLLHFNVTILPVQIRFANITHVF
TLSRKASVYAQVGRICVENCLEFDGFSVSYQLQVLDKNMSSELLSCYSAISITQAPDRML
GLLYVNNSGALSKPGCQDLDYTVVAQEEHTQLVASTQIRILLHGEANVSQESQQLLSCAE
NRQRDDCEASQGLGATTGECQWRQGSEKGISENYSTCSPDLQTCPDSVCDAVESRDTSIC
PQDCTTESVTGGHERGLSGSGIRAGYGTCYCFSEKCFCENADAEAVVSKNRFPDVICDDM
CKTIVATALLCCFIISVLLSSYFIHRYHKNSPKAPIAFAEMTFRRPAQSYPISFPANNVR
RGSQESIEADAFKIPEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFRLKGKAGYTTVAV
KMLKENASHTELRDLLSEFTLLKQVNHPHVIKMYGACSQDGPLYLIVEYAKFGSLRNFLR
ESRKVGPSYMGRDANRNSSYLENPDDRALTMGDLISFAWQISRGMQYLAEMKLVHRDLAA
RNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSF
GVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLRCWKQEPDKRPT
FSDISKELEKMMVKSRDYLDLAASTPADALLYDDALSEEDTPLVDCNNAPLPRTLPSTWI
ENKLYGMSYPSWPETSPVPLSRHDASNPVFTRYANDSVYANWMALPSPAKAVDKLDS
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgaaagttttgggattcgtgtcttcatcgggaaactttcacctatggttcgtg
aatatggagccaagttgtggtttctctccgggaaacgtcgctgcgctgctgcagctgctg
ctgttcggaggagtggtggggttgtacttccctcagaaggaatacactgagacggtgtac
gttggacagcctgcggggacgcccatccttcaggtccacgcaatgctggacggccggtcg
gagcggcctcatttctacctgtgcggcagcaggcggccgccgtacgcactctggttccag
atggatgtccagaccggagagctgtccctcagcaagacgctggaggagacggacttcgcc
tcgctgtatcagaactcctggcccgccaagcgactcgctctccaagtcatggctctaaac
agtgtcagcaagcgcgcgccgtgctccaggaactcagctcacatcacactggactttgtc
aacggttcgatgccgcattgcgcccagacggacatgaaggaactctgcttcccgcacaga
gacacatccaacccacacatcatagagaacaggttccctggggttctccgccaactccgg
cggctcaccagactcaccgtctgccccaactacaccatcgcctacggcgtggagtcagag
actcctgctccgttcgccgtgaacggaaacacctccgagctggtggtgaccgccccgctg
gaccgggaggaaagcgaaaactacagactgctgctggtctgcacggtccaaacggagagc
gtcgtcaccaaggtggaaactccgctggatgtcttcgtggacgacgaggacgacaacgcg
ccgtacgtcaacgggacggacacggcggaggtcgtgatcagttttaatcggacgaagggc
gcagctttcggcaccttgtttgtctttgacagggacttaaccaccttgtttcctaaagac
ctgagccacaacaggtatgtggggactttgctgagcagtgagtcctggattaaagacacg
tttgacataaagggaaccttcagtgaacgcagagcgtctcctggtggcattcgagagtcg
gtttacgattaccagttgatcctgaagaggaacctggacatcacggagaaccggactgtg
tttctggattatttggtgaatgacaccacctatccgggtctggagggaacggtgctgctg
cacttcaacgtcaccatcttaccggttcagatccgctttgccaacatcacacacgtcttc
acgctgtcacgaaaagcttcagtatacgcacaggttggaagaatctgtgtggaaaactgc
ctggagttcgacggcttcagcgtctcttaccagctgcaggttcttgataaaaacatgtca
tcagagctgctgtcatgttattccgccataagcatcacccaggctccagacaggatgctg
ggacttttatatgttaataactccggcgcactgagcaagccgggctgccaggacctggac
tacacggtggtagctcaggaggaacacactcagctggtcgccagcactcagatccgcatt
ttactgcacggtgaagcaaatgtcagtcaggagagccagcagctgttgtcctgcgcagag
aacagacagagagacgactgtgaggcgtctcaaggcctgggagcaacgactggggagtgt
cagtggaggcaaggctctgagaaaggaatatctgaaaactattcgacctgctcccctgac
ctgcaaacatgtcccgatagcgtttgcgatgcggtagaaagcagagacacttcgatttgt
ccgcaggactgcacgacggaaagtgtaaccggaggtcacgaacgaggcctgagtgggagc
ggcatcagagccggctatgggacctgctactgcttctctgagaaatgcttctgcgagaac
gcggacgccgaggccgttgtgtcaaaaaacaggttcccagacgtgatatgtgacgacatg
tgtaaaaccatcgttgccaccgctctcctctgctgcttcatcatttccgtcctcctgtcc
tcatactttatccaccggtaccacaagaactcacccaaagctcccatcgcgttcgctgag
atgaccttccgtcggccagcacagtcttaccctatcagcttccctgccaacaacgtgcga
aggggctcacaggaatccatagaggcagatgcctttaaaatacctgaggatccaaagtgg
gagtttcctcgtaaaaacctggtcctggggaagactttaggtgaaggggagttcggtaaa
gtcgtcaaggcaacggctttcagattgaaaggaaaagccggttacaccactgtggctgtg
aaaatgcttaaagaaaacgcttcacacaccgagctgcgtgacctcctgtccgagttcacc
ctcctgaagcaagtcaaccacccacacgtcataaagatgtacggcgcgtgcagccaggac
gggcctttgtacctcatcgttgagtacgccaaatttgggtcgctccgtaatttcctgcgt
gagagcaggaaagttggtcccagctacatgggcagggatgcaaaccgaaactccagctac
ctggagaaccctgatgacagggcactgaccatgggagacctcatctccttcgcctggcag
atttccagaggcatgcagtacctggcagaaatgaagctcgttcacagggatctcgcggcg
cgaaacgtcctcgtcgccgagggacgaaagatgaagatctccgactttggtctgtcccgg
gacgtttatgaggaggattcgtatgttaagaggagcaagggccgaattcctgtgaagtgg
atggcgatagagtctctattcgatcacatttacacaactcaaagcgatgtctggtccttt
ggtgtgctgctgtgggagatagtgaccctgggggggaacccgtacccaggaattgctcct
gaacgcctcttcaacctcctcaagaccggctaccggatggagagaccagagaactgctct
gaggaaatgtataacctcatgctgcggtgctggaagcaggagccggacaagaggccgacg
ttctcagatatcagcaaagagctggagaagatgatggtgaagagtcgggactacctggac
ctggcggcgtccacgccggccgacgccctgctgtacgacgacgccctctccgaagaggac
accccactagtggactgtaataacgcccctctccctcgaaccctcccctccacatggatt
gaaaacaagctctatggcatgtcataccccagctggcccgagacgagcccggtacctctc
agcagacacgatgccagtaatccggtctttacaagatatgccaatgatagtgtttatgca
aactggatggctttgccttcacctgctaaagctgtggacaagctcgatagctaa
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