Gambusia affinis (western mosquitofish): 122845331
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Entry
122845331 CDS
T07758
Symbol
hlcs
Name
(RefSeq) biotin--protein ligase
KO
K01942
biotin---protein ligase [EC:
6.3.4.9
6.3.4.10
6.3.4.11
6.3.4.15
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00780
Biotin metabolism
gaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
122845331 (hlcs)
Enzymes [BR:
gaf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.9 biotin---[methylmalonyl-CoA-carboxytransferase] ligase
122845331 (hlcs)
6.3.4.10 biotin---[propionyl-CoA-carboxylase (ATP-hydrolysing)] ligase
122845331 (hlcs)
6.3.4.11 biotin---[methylcrotonoyl-CoA-carboxylase] ligase
122845331 (hlcs)
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
122845331 (hlcs)
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Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
BPL_N
BPL_C
Motif
Other DBs
NCBI-GeneID:
122845331
NCBI-ProteinID:
XP_043997474
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Position
LG15:289935..310476
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AA seq
906 aa
AA seq
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MLITLCYVYMWVRFHKCYSVLIRNSLSRLRSRKNSLCLSFCSGSSSVSAPPTAPPPGLHT
AAPHFQQPFPPEDNVFLQLGDKAVYVTEAQACDDLNQWTVLGSSLIDAQRIDNISFIIEA
AENQVGYSPPTNKQVLKWSDYCFPLAFSPGQPFRAVAQTSLDNFSRLGVAFIEDRLQLDS
GLVPSKIVPVLLQDSTLSKALERQCLERPQPVGALLLSSTTPEAGLCESISQLLPADQQN
LHFRKGSLLLPPEVKKRLQERRGSEPLPNSQTVHLESHHHHMEGYGHHLHLSSCHECLEL
ENSTILSVKYASAENIPDLPDDTSVGVDSVDGCLTELEHDSAGFFGKAPNILVYTGGCEE
RFQAIHQLLLDCINVENNTIYPLLQEQALSDPWLDNTRLLVLAEDESLTAELQTRFLTYL
GKGGKVLGLGSALCPAGLHLEVKEGQCLQCRKLIFTREDSTELEATILASGKVYIRDPQG
GGEVELWGELRSDVANQREMVIVRLTHGADGGEAVFCQVHFDIASYSKKMDSKDFNELKV
SNALRYEILTEILNSLGVSCEPSQTPAPSPVYLLATSQDAKESFLKFLHTWADEDAIVRF
SKASFRVGPEPHEGPSDFLSLVTESQEMTQFVMETYCKNLKTNHLGNTLLYTEVTTSTMN
LLEGMVQHLPKNTGLIAVAARQTQGRGRGRNAWLSPLGCAMFTVGVQVELNSRLGQRIPF
LQHLAALAMVEAVRTLPGYQEIDVRVKWPNDIYYSNLMKLGGVLVTSTFVGSTFHLLIGC
GFNVTNSNPTVCINDLIQQYNTQNGCSLEPLSCSQFIALTLNCLQTLITSFQQRGPDAVL
PTYYERWLHSGTRVRLWSEEGPEAQVVGLDDNGFLQVCSKEEGVVSVEPDGNSFDMLKNL
VVMKQR
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atgttaataactctgtgttatgtctatatgtgggtccgttttcacaagtgttactcggtg
ctgatccgcaacagtctgtccaggctgagaagcaggaagaacagcctctgtctcagcttc
tgttccggctccagctcggtctctgcgccccccacagcaccgcccccaggactccacaca
gccgctccacatttccagcagccttttcctcccgaggacaatgttttcctccagctcgga
gacaaggccgtctatgtcacggaggctcaggcatgtgatgacctcaaccaatggactgtt
cttggatcctctttaattgatgctcaacgaatagataatatttcattcataatagaagct
gcagagaaccaagtgggatattctcctccaaccaataagcaagtgctgaagtggtctgac
tactgtttccccctggccttcagcccgggccagccattcagggcggtggcacagactagt
ctagataacttcagccgtcttggggtcgctttcattgaagaccgccttcaactggacagt
ggactggtgccttcaaagatagtccctgttttgctccaagacagcactctcagtaaggcg
ttggaacggcagtgtcttgagaggccacagcctgtgggggcgctcttactgtcgtccact
actcctgaggcgggcctctgtgagtcaatctctcaactgttgcctgctgaccagcagaac
ctgcacttccgaaaaggtagtctcctgttaccccctgaggtgaagaagaggctgcaggag
cggcggggatcagagcctctgcccaactctcaaactgttcatttggaatcccatcatcac
cacatggagggctatggacaccaccttcatctctccagctgccatgaatgtttagaactg
gagaacagcaccatcctctctgtcaaatatgcctcggccgagaacattccagatctacct
gatgacacctctgtgggggtggacagtgtggatgggtgtctgactgaactagaacatgat
tctgctgggttttttggaaaagcaccaaacattcttgtgtacacaggtggatgtgaggaa
cgtttccaagcaattcatcagcttttgttagactgcataaatgtggaaaacaacactatt
tatcccctcctgcaagaacaagcgctaagtgacccatggctggacaacaccaggctcctg
gttttggcagaagacgaatccttaactgctgagcttcagacccgctttcttacttactta
ggcaagggtgggaaagtgctagggctgggctccgctttgtgcccagcaggtctccatctg
gaagttaaggaaggacaatgcctccagtgtaggaagttgatcttcaccagagaagacagc
acagagctggaagcaaccattctggcaagtggaaaggtctacattcgggatcctcaggga
ggaggggaagtggagctctggggggagctgagaagtgatgtggccaaccagagagaaatg
gttattgtcaggctaacccatggagccgacggcggggaagctgtcttctgtcaggttcat
tttgacattgcatcctactcaaagaaaatggattcaaaagatttcaatgagctgaaggtc
agcaatgcactgcgatatgaaattttgacagaaatccttaattccttgggagtcagctgt
gaaccaagccagactcctgccccaagtcctgtctacctgctggccacctcccaggatgcc
aaggaaagttttctgaagttcctgcacacatgggcggatgaagatgctattgttcgattc
tccaaagcctccttcagggtaggccctgaaccacatgaaggtccctcggactttctgtcc
ttggtcacagaatcccaagagatgacccaatttgttatggagacttactgcaaaaatctg
aagaccaaccatctgggaaacaccctgctctacactgaggttaccacttctaccatgaac
ctgctggaagggatggtgcagcacttacctaagaacactggtttgatagcagtagctgct
cgacaaacacaaggaagaggccgaggcagaaatgcttggctcagccctctaggctgcgca
atgttcacagttggggtccaagtcgagctgaactccaggcttggtcaaagaattcctttc
ctgcaacatttggctgctttagccatggtggaagctgttcgcacacttcctggatatcag
gaaatagatgtgagggtgaagtggcccaatgacatctactacagtaacctgatgaagctg
ggaggagttctggtaacgtcaacttttgtaggatcaacttttcacctgctgataggatgt
ggctttaatgtaacaaacagcaacccaacagtgtgcattaatgacctgatccagcagtac
aacactcagaacggctgcagcctggagcccctcagctgctctcagttcatcgctctcact
ctgaactgcctccagactctcatcaccagtttccagcaaagaggccccgacgctgttctg
cctacttactatgaaagatggcttcacagtgggactcgggtccgtctgtggagtgaggaa
ggaccagaagcgcaggtggttggtctggatgacaacggctttctgcaagtgtgcagtaaa
gaggaaggagtggtctctgtggagcctgatggaaactcgtttgacatgttgaagaacctc
gtggtcatgaagcagcgctag
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