Glaciecola sp. 4H-3-7+YE-5: Glaag_0969
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Entry
Glaag_0969 CDS
T01483
Name
(GenBank) tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
gag
Glaciecola sp. 4H-3-7+YE-5
Brite
KEGG Orthology (KO) [BR:
gag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gag03016
]
Glaag_0969
Enzymes [BR:
gag01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
Glaag_0969
Transfer RNA biogenesis [BR:
gag03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Glaag_0969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
3HCDH_N
Pyr_redox_2
FAD_binding_2
GIDA
DUF498
F420_oxidored
Motif
Other DBs
NCBI-ProteinID:
AEE21930
LinkDB
All DBs
Position
complement(1139580..1141700)
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AA seq
706 aa
AA seq
DB search
MTIKTADIQFNADGTPVATDFDDVYFSSSDGAQETQYVFLQNNQLPSRWQHWSKPTFVIA
ETGFGTGLNLLVTLAAFKDYLAQNPASTFTLHFISTEKYPLNHADLVQALGAFVQFKDSA
NALIAQYPMPLNGCHRMAFLNNRVVVDLWLGDIHDSLPQWHTNENGLVDAWYLDGFAPSK
NPQMWSAQLFEQMARLAAKDCTFATFTAAGFVKRGLRDAGFIVEKRKGHGRKREMLAGYI
APKFQAQINRQQARYYQRSAYAHVENMDATGANAADTNNRTQGAATEKPKVAIIGAGIAG
ATIAYAMAQKGYECDVYFKEAEPAQGASGNPQAGFYPQLNVDASNASQINAHSFVYAANQ
YRQLLSQGFDFAHQWCGVLQLGFKPALAQRYAKLTDNQLWPPDLVRYVEANEASQIANCE
IPCGGLFMPLGGWIDPLQLVNALFNAAACLSKVTLHSHHCLSSLEQKAEHTETSQPQPWQ
LCFNQTADKISQIRVSTDIVIFATGAQSLDIQHLTEYPLRMVRGQVEAVPTQPALSELNT
VLCHKGYLTPEYNGHHALGSTYVKDDLSTEYRQSEQDKNLATHYQSLAQCRWAQDVVGNA
QGRAAVRCSSPDHLPLVGALADISKQKTELNDLYKALPLNYYPKGSDVENLYMLKGLGSR
GLTTAPLMAELLASQISGHPLPMANNLLNTLNPNRFLIRQLIRREI
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgaccattaaaacagcagatattcagtttaacgctgacggcacccccgtcgccacagat
ttcgacgatgtttatttctcttcgtctgatggcgcgcaagaaactcagtacgtattcttg
caaaacaatcagcttccatctcgctggcaacactggtcaaagccgacctttgtcattgcc
gaaacaggattcggcactgggctcaatttattagtaacattggctgcattcaaagactat
ttagcccaaaaccctgccagcacctttactctgcattttatcagcaccgagaaatatcca
cttaaccatgctgacttagtccaagcgttgggcgcttttgttcaattcaaagatagcgct
aacgcattaattgctcaatatccgatgccacttaacggctgccacaggatggcatttttg
aacaaccgcgtggtagtcgacttatggctaggcgatattcatgactcattgccccaatgg
cataccaatgaaaacggcctagtcgacgcttggtacttggacggttttgcgccaagtaaa
aacccgcaaatgtggtcggcgcaattgtttgaacaaatggcccgtttggcagcaaaagac
tgcacctttgccacctttaccgcagcgggctttgtaaaacgcgggttgcgtgatgcgggt
ttcatcgtagaaaagcgcaaaggtcacgggcgcaagcgagaaatgctcgccggatatatc
gcccccaaattccaagcgcaaattaatcgccagcaagccagatattatcaacgtagcgcg
tatgcacatgttgaaaatatggatgccacaggtgcgaatgcagcagataccaacaaccgc
acccaaggcgccgcaaccgaaaagcctaaggttgccatcataggggctggcatagcaggg
gccactatcgcctatgccatggcgcaaaaaggttatgagtgtgatgtgtattttaaagaa
gccgagcccgcacaaggcgcttcgggtaatccacaagcgggtttttacccgcaactgaat
gtggatgccagcaacgctagccaaattaacgcccatagtttcgtatatgccgcgaatcag
taccgacaacttttatcgcagggttttgacttcgcccatcaatggtgcggcgtgctgcaa
cttggttttaaacctgcattagcccagcgctatgcaaaacttactgacaatcaattatgg
ccccctgaccttgtacgctatgttgaagcaaacgaagcaagccagatagcaaactgtgaa
atcccctgcggtggcctttttatgcctttaggtgggtggatagatcccctgcaattggtc
aatgcgttatttaacgcagcggcgtgcttgagcaaggtcacattgcacagccatcattgc
ttaagcagcctagaacaaaaagcagaacacacagaaacatcgcaacctcagccttggcag
ctgtgttttaaccaaaccgctgacaagataagccaaattagagtaagtactgatattgtg
atttttgcgacgggagcgcaaagcctcgatatacaacaccttactgagtatccgctgcgt
atggttcgcggtcaggttgaagcggttcctactcagcctgctctcagtgaacttaacacg
gtgctgtgccacaaagggtatttaacccccgaatacaatgggcaccacgccttaggctca
acctacgtaaaagacgacttaagtactgagtaccggcaaagcgagcaagataaaaaccta
gccactcactatcagtcactggcgcagtgccgctgggcacaagacgtggtaggcaacgca
caaggccgggcagccgtgcgctgtagttcaccggatcacctgcccttagtgggcgcatta
gcagatataagtaaacaaaaaacagaattaaacgatttatacaaagccttgccgctaaac
tattacccaaaaggcagtgatgtggagaatctgtatatgcttaaggggcttggttcccgg
ggcctgaccaccgcaccgttaatggccgaattgctcgccagtcaaattagtggtcacccc
ctgcccatggccaacaatttgctgaacacattaaatccgaatcgttttttgatccgtcaa
ttgatccgccgagaaatatag
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