Granulosicoccus antarcticus: IMCC3135_31965
Help
Entry
IMCC3135_31965 CDS
T04938
Symbol
fadB_2
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
gai
Granulosicoccus antarcticus
Pathway
gai00071
Fatty acid degradation
gai00280
Valine, leucine and isoleucine degradation
gai00310
Lysine degradation
gai00362
Benzoate degradation
gai00380
Tryptophan metabolism
gai00410
beta-Alanine metabolism
gai00640
Propanoate metabolism
gai00650
Butanoate metabolism
gai00907
Pinene, camphor and geraniol degradation
gai00930
Caprolactam degradation
gai01100
Metabolic pathways
gai01110
Biosynthesis of secondary metabolites
gai01120
Microbial metabolism in diverse environments
gai01200
Carbon metabolism
gai01212
Fatty acid metabolism
Module
gai_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
gai00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
IMCC3135_31965 (fadB_2)
00650 Butanoate metabolism
IMCC3135_31965 (fadB_2)
09103 Lipid metabolism
00071 Fatty acid degradation
IMCC3135_31965 (fadB_2)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
IMCC3135_31965 (fadB_2)
00310 Lysine degradation
IMCC3135_31965 (fadB_2)
00380 Tryptophan metabolism
IMCC3135_31965 (fadB_2)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
IMCC3135_31965 (fadB_2)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
IMCC3135_31965 (fadB_2)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
IMCC3135_31965 (fadB_2)
00930 Caprolactam degradation
IMCC3135_31965 (fadB_2)
Enzymes [BR:
gai01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
IMCC3135_31965 (fadB_2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
IMCC3135_31965 (fadB_2)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
IMCC3135_31965 (fadB_2)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
IMCC3135_31965 (fadB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
ASJ76440
UniProt:
A0A2Z2P4Q6
LinkDB
All DBs
Position
complement(7276411..7278585)
Genome browser
AA seq
724 aa
AA seq
DB search
MLFTGAAFKLTRDNDILELCFDSEEQKVNVFNRKALAEFGEVLAVIEQQTDVAGLVLTSS
KGVFVAGADITEFLGYFAAEDAVLETMLKEVNSMFNRFEDLPFPTVAAINGEAQGGGFEI
SLACDFRVAAPTARMGLPEVKLGIMPGWGGSVRLPRLIGVDNAVEWMCTGASKKASAALA
DGAIDAVVHDGDVRAAAIAIIEQVRAGKLDAMARRSVKIAPLALSEMERTMAFESAKGVV
GAQAGPHYPSPLTIVNTVAKHASKSRDEALPIESASFVKLAKTDVAESLVGIFLNDQALK
RLARKQSKDALPVKHSAVLGAGIMGGGIAYQSASNGVSITMKDIREEALEAGLDEAGKLL
KKQIQRGKLKPEGMATVLNAIQPALSYGEFGKVDLVVEAVVENPKVKMSVLTEVEAQVSD
DTIITTNTSTISVDLLSTALKRPENFCGMHFFNPVHRMPLVEVIRAKTSSEQAIATTVAY
ALAMRKTPIVVNDCPGFLINRILFAYFGGFNKLVADGGDFMAIDKALERFGWPMGPAYLL
DVVGMDTGKHAAGVMAEGFPDRMASESKTIIDALFDAERLGQKNGKGFYKYEVDRKGKPQ
KLPDPDVAAVIDSVQSAKAEISAEDMVDRLMIPMCIEAARCLEDDIVGAAFEVDMGLVYG
VGFPPFRGGALHHVDKIGLAAFCERADQFAELGPLYHPTESMREMAKTGKTFYTKISADK
GASA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgctttttaccggcgcagctttcaagctgactcgtgacaacgatatcctcgagctttgt
tttgatagcgaagaacagaaggtcaatgtcttcaatcgcaaggccttggcagaatttggt
gaagtgcttgccgtcatcgaacaacagacagatgtggccggacttgtattgaccagtagc
aaaggtgtgttcgtggccggtgccgatatcaccgaatttctgggctactttgcagccgaa
gatgcggttctggaaacgatgctgaaggaagtcaacagcatgttcaaccgattcgaagat
ctgccttttccaacggttgccgccatcaatggtgaagctcagggcggcggattcgaaatc
agtctggcctgtgattttcgggttgcagcgccgacagcgcgtatgggtctgccggaagtc
aagctgggcatcatgccaggctggggtggttcggttcgactgccacgtctgatcggtgtc
gacaacgcggttgaatggatgtgtaccggagcgtcgaagaaggcaagtgcggccctggct
gacggtgctatcgatgccgtggtccatgatggtgatgttcgcgcggcagctatcgctatt
atcgagcaagtgcgtgctggcaagctggatgccatggctcgacgatcggtaaagattgcg
cctctggcattgtcagagatggaacgcaccatggctttcgagtccgccaaaggcgttgtc
ggggctcaagccggtcctcattacccctcgccattgactatcgtcaacacggtggcaaaa
cacgcttccaagtcacgtgatgaagctttaccgattgaaagtgcaagcttcgtcaagctg
gctaaaactgatgtggctgaaagtctggttggtattttcctgaatgatcaggcgctgaaa
cgcctggcgcgcaagcaaagtaaagacgctctgccggtcaagcattcggcggtattgggc
gcgggcatcatgggaggcggcattgcctatcaatccgcttccaatggtgtgtccatcacc
atgaaggatattcgtgaagaagcgttggaagccggtctggatgaagcaggcaagctgctc
aagaagcagattcaacgcggtaaactcaagcccgaaggtatggctacagtattgaatgcc
attcaaccggctttgagctacggcgaatttggcaaggtggatctggtcgtcgaggcggtg
gtcgagaatcctaaagtcaagatgtccgtactgacagaagtggaagctcaggtgagtgat
gacaccatcatcaccaccaatacatcgaccatctcggtcgatctgctttccacagccttg
aagcgtcctgaaaacttctgcggcatgcatttcttcaaccccgtgcatcgtatgccgctg
gttgaggtcattcgtgcaaagacatcgtcagaacaagccattgccactaccgtggcctat
gccttggcgatgcgcaagacgcctatagtggtcaatgactgcccgggctttctgattaac
cgaattttgtttgcctactttggtggcttcaacaagctggttgccgacggcggtgatttc
atggccatcgacaaggctctggaacgatttggttggccgatgggtccggcttatttgctg
gatgtggttggcatggataccggcaagcatgctgcgggtgtcatggctgaaggcttccct
gatcgcatggccagtgaaagcaaaaccattatcgatgccctgtttgatgctgaacgtctg
ggtcagaagaacggcaagggtttctacaagtacgaagtcgatcgaaagggcaaaccgcag
aagctgcctgatccggatgtcgctgccgtcattgacagtgtgcagagcgccaaggccgag
atttctgccgaggacatggttgaccggctgatgattccaatgtgcatcgaggcggcccgt
tgtctggaagacgatattgtgggtgcggccttcgaggtggatatggggctggtttatggt
gtgggttttcctccattccgtggcggtgctctgcaccatgtggacaagatcggattagcg
gccttttgtgaacgtgccgatcagtttgctgagctgggaccgttgtatcatccgacagaa
tccatgcgcgagatggccaagaccggcaagactttctacaccaagatcagcgctgacaaa
ggagcatccgcatga
DBGET
integrated database retrieval system
