Gordonia amarae: GII34_10785
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Entry
GII34_10785 CDS
T07320
Symbol
pdxS
Name
(GenBank) pyridoxal 5'-phosphate synthase lyase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
gam
Gordonia amarae
Pathway
gam00750
Vitamin B6 metabolism
gam01100
Metabolic pathways
gam01240
Biosynthesis of cofactors
Module
gam_M00916
Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
gam00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
GII34_10785 (pdxS)
Enzymes [BR:
gam01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
GII34_10785 (pdxS)
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NanE
NMO
IGPS
Glu_synthase
DHO_dh
FMN_dh
TetR_C_27
Motif
Other DBs
NCBI-ProteinID:
QHN21952
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All DBs
Position
2418189..2419076
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AA seq
295 aa
AA seq
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MSQFQGTARVKRGMAEMLKGGVIMDVVTPEQAKIAEDAGAVAVMALERVPADIRAQGGVS
RMSDPDMIDGIIAAVSIPVMAKARIGHFVEAQVLQSLGVDYVDESEVLTPADYANHIDKW
QFTVPFVCGATNLGEALRRITEGAAMIRSKGEAGTGDVSNATTHMRKIRDEIRKLTSLPK
DELYVAAKELQAPYELVAEVAEAGKLPVTLFTAGGIATPADAAMMMQLGAEGVFVGSGIF
KSGNPAQRAAAIVQATTFHDDPDVLAKVSRGLGEAMVGINVDEIPQPHRLAERGW
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcagttccagggcacagcccgggttaagcgcggaatggccgaaatgctcaagggc
ggcgtgatcatggatgtggtcacccccgagcaggcgaagatcgccgaggacgcgggtgcg
gtcgcggtgatggcgctcgagcgtgtgccggccgatatccgcgctcagggcggcgtgtcg
cgcatgagtgatcccgacatgatcgacggcatcatcgccgccgtcagcatcccggtcatg
gccaaggcccgtatcggccacttcgtggaggcccaggtcctgcagagcctcggcgtcgac
tacgtcgacgagtcggaggtgctcacccccgccgactacgccaatcacatcgacaagtgg
cagttcaccgtgcccttcgtgtgcggtgcgaccaacctcggtgaggcgctgcgccgcatc
accgagggcgcggcgatgatccgctccaagggtgaggccggcaccggcgacgtctccaac
gccaccacccacatgcgtaagatccgcgacgagatccgcaagctgacctcgctgcccaag
gacgagctctatgtggcggccaaggaactgcaggccccgtacgaactcgtcgccgaggtc
gccgaggcaggaaagctgccggtcacgctgttcaccgcgggcggcatcgccaccccggcc
gacgcggcgatgatgatgcagctcggtgctgagggtgtgttcgtcggatcgggtatcttc
aagtccggcaatccggctcagcgggccgcggcgatcgtgcaggccaccaccttccacgac
gaccccgacgtgttggccaaggtgtcgcgcgggctgggcgaggcgatggtcgggatcaat
gtggacgagatcccgcagccgcaccgactggccgagcgcggctggtaa
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