Gordonia amicalis: IHQ52_19525
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Entry
IHQ52_19525 CDS
T08222
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
gami
Gordonia amicalis
Pathway
gami00190
Oxidative phosphorylation
gami03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gami00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
IHQ52_19525
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IHQ52_19525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gami03019
]
IHQ52_19525
Enzymes [BR:
gami01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
IHQ52_19525
Messenger RNA biogenesis [BR:
gami03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IHQ52_19525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
UKO91158
LinkDB
All DBs
Position
4247056..4249254
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AA seq
732 aa
AA seq
DB search
MSPADDTSSTTATVTTTPIPNAPPAATLVPDESADLPEDRYLNRELSWLDFNSRVLALAE
DTSLPLLERAKFLAIFASNLDEFFMVRVAGLKRRDETGLSVRSADGLSPREQLMRIAGRT
QSIADRHARVFLDSVRPALADNDIYVVSWSQLTDDQRARMVDYFQDEVFPVLTPLAVDPA
HPFPYISGLSLNLAVTVKDINESGEHFARVKVPDNVNRFIRVDQLAPYRGPDDGTHTKSA
VFLPMEHLIAANLGTLFPGMEVVEHHAFRITRNADFEVEEDRDEDLLQALERELARRRFG
SPVRLEVADDMSEHMLELLLRELDVNPADVIQVPGLLDLSSLFEIYDLDRPHLKDRPFVP
ATHPAFGERETPKSVFSTLREGDVLVHHPYDSFSTSVQRFIEQAAADPQVLAIKQTLYRT
SGDSPIVNALIDAAEAGKQVVALVEIKARFDEQANIKWARKLEQAGVHVVYGLVGLKTHC
KTCLVVRREGSTIKRYCHIGTGNYNPKTARLYEDVGLLTAAPDIGADLTDLFNTLTGYSR
KKEYRNILVAPQGIRAGIIERIHREIELFRAGDDRARVQLKANALVDEQVIDALYRASQE
GVPVDVVVRGISALRPGIAGVSDNIHVRSILGQFLEHSRILHFGAQNEYWIGSADMMHRN
LDRRIEVMVNVRDKRLAGELGDIFASALDPRTRCWVLQTDGSWVASPAAGEEVRDHQRQM
MRRNRRRPEINS
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
gtgagccctgccgacgacacctcatcgacgaccgccacggtcacgaccacgccgatcccc
aatgccccgccggccgcaacgctcgtccccgacgagtccgcggacctgcccgaggatcgg
tatctcaaccgagaattgagttggctcgacttcaactcccgggtgctggcactcgccgag
gacacctcgctgccgttgctcgaacgcgcgaagtttctcgccatcttcgcctccaacctc
gatgagttcttcatggtccgggtcgcgggcctcaaacgccgcgacgagacgggcctgtcg
gtccgatcggcagacggactctccccgcgggagcagctgatgcgcatcgccgggcggacc
cagagcatcgccgaccgtcacgcccgcgtcttcctcgactcggtccgaccggcattggcc
gacaacgacatctatgtcgtgtcctggtcacagctcaccgatgaccagcgtgcccggatg
gtcgactacttccaggacgaggtcttccccgtcctcaccccgctcgcggtcgacccggct
cacccgttcccctacatcagtggcctgtcgctgaatctcgcggtgaccgtcaaggacatc
aacgagagcggcgagcacttcgcccgagtgaaggtcccggacaacgtgaaccgcttcatc
cgggtcgatcagctcgcgccctaccgcggcccggacgacgggacgcacacgaagagcgcg
gtgttcctgccgatggaacatctcatcgcggccaatctcggcacgttgttcccgggcatg
gaagtagttgaacatcatgccttccggatcacccgaaacgccgatttcgaggtcgaggag
gaccgcgacgaggacctcctgcaggccctcgagcgtgaactcgcccgacgccggttcggt
tcaccggtgcgtctcgaggtggccgacgacatgagcgagcacatgctcgagctgttgctg
cgcgagctcgacgtcaacccggccgatgtcatccaggtgcccggtctgctcgatctgtca
tcgcttttcgagatctacgacctggatcggccgcatctgaaggatcgtccgttcgtgccg
gccacccacccggcgttcggcgagcgcgagacacccaagagtgtcttctcgacgttgcgc
gagggcgacgtcctcgttcatcacccgtacgattcgttctccacgagcgtgcaacggttc
atcgaacaggcggcggccgacccacaggttctcgcgatcaagcagaccctctaccgcacc
tcgggtgattccccgatcgtcaatgcgctcatcgatgccgccgaggcgggcaaacaggtc
gtggcgctggtggagatcaaggcacgcttcgacgagcaggccaacatcaagtgggcgcgc
aaactcgagcaggccggtgtccacgtcgtctatggactggtggggctcaagacgcactgc
aagacatgtctggtggtccgccgcgagggctcgacgatcaagcgctactgccacatcggt
accggcaactacaacccgaagaccgcgcggctgtacgaggacgtgggcctgctcaccgcc
gcccccgacatcggcgcggacctgacggacctgttcaacacactgaccgggtattcacgc
aagaaggagtaccgcaacatcctcgttgccccccagggcatccgggcgggcatcatcgag
cgcatccaccgcgagatcgaactcttccgcgcgggcgacgaccgcgctcgcgtgcagctc
aaggccaatgcgttggtcgacgagcaggtgatcgacgcgctgtaccgggcctcgcaggaa
ggggtcccggtcgatgtcgtggtccgcgggatcagcgctctgcgtccggggattgccggc
gtcagcgacaacatccacgtccggtcgatcctcggccagttcctcgaacattcccgcatc
ctgcatttcggtgcccagaacgagtattggatcggcagcgccgacatgatgcatcgcaac
ctggatcgtcggatcgaggtgatggtgaacgtgcgcgacaagcgcctcgccggtgaactc
ggcgacatcttcgcctcggcgctcgacccgcgcacgcgatgctgggtcctgcagaccgac
ggcagttgggtggcctcccctgccgcgggcgaggaggtccgcgaccatcagcgacagatg
atgcgccgcaatcgtcgtcggccggagatcaattcgtga
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