Gracilinanus agilis (agile gracile opossum): 123235183
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Entry
123235183 CDS
T07702
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas01522
Endocrine resistance
gas04330
Notch signaling pathway
gas04658
Th1 and Th2 cell differentiation
gas04919
Thyroid hormone signaling pathway
gas05020
Prion disease
gas05165
Human papillomavirus infection
gas05200
Pathways in cancer
gas05206
MicroRNAs in cancer
gas05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
123235183 (NOTCH1)
09150 Organismal Systems
09151 Immune system
04658 Th1 and Th2 cell differentiation
123235183 (NOTCH1)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
123235183 (NOTCH1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
123235183 (NOTCH1)
05206 MicroRNAs in cancer
123235183 (NOTCH1)
09162 Cancer: specific types
05224 Breast cancer
123235183 (NOTCH1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
123235183 (NOTCH1)
09164 Neurodegenerative disease
05020 Prion disease
123235183 (NOTCH1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
123235183 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_4
Ank_5
Ank_3
EGF_3
JAG1-like_EGF2
cEGF
DL-JAG_EGF-like
Motif
Other DBs
NCBI-GeneID:
123235183
NCBI-ProteinID:
XP_044517208
LinkDB
All DBs
Position
2:complement(273607150..273689721)
Genome browser
AA seq
2560 aa
AA seq
DB search
MRPLLVPVVCLSLLPVLARGLRCSQPSEICLNGGKCEIHDNGTESCICSGAYVGERCQAP
NPCLSSPCKNAGTCHTVIRGNIVDYACTCRLGFSDRLCLTPEDNACLNNPCRNGGTCTLN
TLTDFKCRCPPGWSGKTCQQADPCASNPCANGGHCVPFESSYICVCTSGFHGPTCKQDVN
ECTNTPGICKNEGTCHNEVGSYRCVCTSAYTGQNCEQLYVPCNPSPCQNGGTCRQTGDTT
YECTCLPGFTGQNCEDNIDDCPGNNCKNGGTCVDGVNTYNCRCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNTHGDYNCVCVNGWTGEDCSENIDDCANAACFHGATCHDRVASFYCE
CPHGRTGLLCHLNDACISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSLGA
NPCEHAGKCINTLGSFECQCLQGYTGPRCEIDVNECISNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGNCIDKISEFHCECPTGFNGHLCQYDIDECASTPCKNG
AKCVDGPNTYTCECTEGFTGSHCEVDINECDPDPCHYGTCKDGIAAFTCRCQPGYTGHRC
ETNINECQSQPCRNGGTCQDRHNAYYCLCLKGTTGPNCEINLDDCASNPCDSGKCIDKIN
GYECACEPGYTGSMCNINIDECAGNPCHNGGTCEDGINSFTCHCPDGYHDPTCLSEVNEC
SSNPCIHGKCRDGLNGYKCDCDPGWSGTNCDINNNECESNPCVNGGTCKDMTSGYVCTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGATCEEVLAPCAKDPCKN
GGECKESEDYESFSCMCPTGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRCSCRAGYT
GRNCETDVDDCQPNPCHNGGACSDGINAAFCDCLPGFRGPQCEEDINECASNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCLCPPGFTGSYCQH
DINECDSRPCLHGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTNNL
YRCECNSGWTGLYCDVPSVSCEVAAKQQDTDVAHLCRNSGLCMDTGNTHYCRCQAGYTGS
YCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCID
LINTYKCSCPRGTQGVHCEINVDDCNPFIDPLTRGPKCFNNGKCVDQVGGYSCNCPPGFV
GERCEGDVNECLSNPCDPHGTQNCVQRVNDYKCECRQGYTGRRCDSVIDGCKGKPCKNGG
TCAVATNTGRGFICNCPSGFEGATCENDSRTCGSLHCMNGGTCVSGQKSSKCLCLGPFTG
PECQYPVSSPCISNPCYNHGTCEFIPESPFYQCHCPANFNGLLCHILDYGFLGGVGRDIT
PPEFEEKCEIPECRKDTGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCTQSLQCWKYFN
DGSCDSQCNNAGCLFDGFDCQKVEVQCNPLYDQYCKDHFSDGHCDQGCNNAECEWDGLDC
ADNMPEKLADGTLVVVVLMLPENLKNNSFHFLRELSRVLHTNVVFKKNAKGEYMIFPYYG
NAEELKKHHIKRSAESWADMSGTVFDKVKTSLYSRVGGRQRRELDQMDIRGSIVYLEIDN
RQCIQSSSQCFQSATDVAAFLGALASMGNLNIPYKIEAVQSETVDSPEPSQLYPMYVVVA
ALVLLAFIGFGVLVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNASD
GALMDDNQNEWGDDDLETKKFRFEEQVTLPDMDDQTDHRQWTQQHLDAADLRIPSMAPTP
PQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHN
QTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIR
NRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVD
AAVVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQ
ERMHHDIVRLLDEYNLVRSPPLHNGPLGAPTLSPPLCSPNSYIGNLKPAVQGKKARKPST
KGLGCNGKDAKDIKARRKKSQDGKGCLLDSSSVLSPVDSLESPHGYLSDVASPPLMTSPF
QQSPSMPLNHLPGMPDPHLSIGHLNMAGKQDMAALGSASRLGFDAVPPRLSHLPVASSPS
AVMGSGSMNFAVGGAASLNGQCEWLSRLQNGMVQNQYNPLRGNIPAGPLNPPPQSLQHNL
LGPLHNGLSTTTLSQMMSYQGMPNTRLATQPHMMQAPQLQQMQPQQNLQQQQNLQQQQNL
QQQQNLQQQQQQQQQQQQQQAQQHNTSSTTTGHIGQSFLGGELNQQDVQQLGSSSMAVHA
ILPQETQILPTTLPSSLSQPMTTTQFLTPPSQHSYSSPMDNTPSHQLQVPDHPFLTPSPE
SPDQWSSSSPHSNISDWSEGISSPPTSMQSQIAHIPDAFK
NT seq
7683 nt
NT seq
+upstream
nt +downstream
nt
atgcggccgctcctagtgcccgtcgtctgtctgtcgctgctgccggtcctcgcacgaggc
ttgcggtgttcacaaccttcagaaatctgtctgaatggaggcaagtgtgaaatccatgac
aatggaacagaatcgtgcatttgcagtggggcctacgttggtgagcgttgtcaagccccc
aacccttgcctcagttccccgtgcaagaatgctgggacctgccacacagtcatccgaggc
aacatcgtggactatgcctgcacctgccgcctgggcttctctgaccggctctgcctgact
cctgaggacaatgcctgcttgaataacccctgccgaaatggaggcacctgtaccctcaat
acactcactgacttcaaatgtcgttgtcccccgggatggtcaggtaagacatgccaacag
gctgatccttgtgcatccaatccctgtgccaatggcgggcattgtgtgcccttcgagtcc
agttacatctgtgtatgcacaagtggtttccacggccctacctgcaagcaggatgtcaac
gagtgtacaaatacccctggcatctgcaagaatgagggcacctgtcacaacgaggttggc
tcctaccgctgtgtctgcacatcagcctatactggccagaactgcgagcagctctacgtg
ccatgcaatccctctccctgtcagaacggaggcacctgccgtcagactggagataccacc
tatgagtgtacttgtctgccaggtttcactggccagaactgtgaagacaacattgatgat
tgtcctggcaataactgtaagaatggagggacctgtgtggatggagtgaacacctacaac
tgtcgctgtccccctgaatggacaggtcagtattgtacagaggatgtagatgagtgtcag
ctcatgcccaacgcctgccagaatggtggtacttgccataatacccatggcgactacaac
tgtgtgtgtgtcaatggctggactggtgaagactgcagtgaaaatatagatgactgtgcc
aatgctgcctgctttcatggtgccacctgccacgaccgtgttgcctctttctactgtgaa
tgcccccatggccgcacaggtctgctttgccaccttaatgacgcttgtatcagcaaccct
tgcaatgaaggctccaactgtgataccaaccctgtcaatggcaaagctatctgtacatgc
ccttccggctatatgggaccagcctgcaaccaagacgtggatgagtgctcattgggtgct
aatccttgtgagcatgccggtaaatgcatcaacactcttgggtcctttgagtgtcagtgc
ctgcaaggctatactggaccccgatgtgaaattgatgtcaatgaatgtatatctaatcct
tgtcagaatgatgccacctgcttggaccagattggagagttccagtgcatctgcatgcca
ggctatgagggtgtttattgtgagatcaacacagacgagtgtgccagcagcccttgcctg
cacaacggcaactgcatcgacaagatcagcgagttccactgcgagtgccccacgggcttc
aatggacacctctgtcagtatgacatcgacgagtgtgccagcacaccttgtaagaatgga
gcaaagtgtgtggacggccccaatacctacacctgcgagtgtactgaaggtttcaccggt
tcccactgtgaggtggacattaatgaatgcgaccccgacccttgccactatggaacctgt
aaggacggcattgctgccttcacttgccgctgccagccaggttacactgggcatcgctgt
gaaaccaacatcaatgaatgtcagagccagccttgccggaatgggggcacctgtcaagac
cgccacaatgcctactactgtctctgtctcaaggggaccacggggcccaactgtgagatt
aaccttgatgactgtgccagcaacccctgtgactctggcaaatgtatagacaagatcaat
ggttacgagtgtgcctgtgagccaggctacacagggagtatgtgcaacatcaacattgat
gaatgtgctggaaacccatgtcacaatggtggcacatgtgaagatggcatcaatagcttc
acctgccactgcccggatggctaccatgatcccacatgcctttccgaagtcaatgaatgc
agcagtaacccatgtatacatgggaaatgccgggatggccttaatgggtacaagtgtgat
tgtgaccctggctggagtggtaccaactgtgacatcaataacaacgagtgtgaatcgaat
ccatgtgttaatggagggacctgcaaggacatgaccagtggctatgtgtgcacttgccgt
gagggcttcagtggccccaactgtcagaccaacattaatgaatgtgcatctaacccatgt
ctgaaccagggtacctgtattgatgatgtggctggctacaagtgtaactgcctcctaccc
tatactggtgccacctgtgaggaagtgctggctccatgtgccaaagacccatgcaaaaat
ggcggagagtgtaaagaatcagaagattacgagagcttctcatgtatgtgccccacaggc
tggcaaggacagacctgtgagattgacatcaatgaatgtgtgaagagcccatgtcggaat
ggtgctacctgtcagaataccaatggaagttaccgctgtagttgccgggctggctacacg
ggacgcaactgtgagaccgacgtggatgactgccaaccaaatccttgccataatggtggt
gcctgctcggatggtatcaatgctgccttctgtgactgcctacctggcttccgaggtccc
cagtgtgaggaagacatcaatgagtgtgccagcaacccatgtaaaaatggggctaattgc
actgactgtgtcaacagttatacctgcacctgtccatctggcttcagtggaatccactgt
gagaacaacactccagactgtactgagagctcctgcttcaatgggggcacctgtgtggat
ggcatcaacaccttcacttgcctgtgcccaccaggcttcacaggcagctactgtcaacat
gacataaatgagtgtgactcgcgcccttgcctacatgggggtacctgccaggatagctat
ggcacttacaagtgtacctgtccccaaggatatacaggcctcaattgccagaacctggtg
cgctggtgtgactcatcgccctgtaagaatggtgggaaatgctggcagaccaacaacctg
taccgctgtgagtgcaacagcggctggactggcctgtactgtgatgtgcccagtgtgtct
tgtgaggtggctgccaagcagcaagatactgatgtggcacacctgtgccggaactctggc
ctctgcatggacactggtaacacccattactgccgctgccaggcaggctatacaggcagc
tactgtgaggagcaggtagatgagtgctctcccaacccctgccagaatggagccacctgt
acagactatctgggaggctattcatgtgagtgtgtcgctggctatcatggagtgaattgc
tctgaggagatcaacgagtgtttgtcacacccttgccagaatggtggcacctgcattgat
ctgatcaatacatacaagtgctcgtgtcccagagggactcaaggtgtgcactgtgagatc
aacgtggatgactgcaacccatttattgaccctcttacccgggggccaaaatgtttcaat
aatggcaaatgtgttgaccaggttggagggtacagttgtaactgccctcctggctttgtt
ggagagcgctgtgaaggtgatgtcaatgaatgtctctctaacccctgcgatccccatggc
actcagaactgtgtacagcgtgtcaatgattataaatgcgaatgtcggcaaggatacaca
gggcgccgttgtgattcagtcattgatggatgtaagggcaagccctgcaagaatggtggg
acctgtgctgtggccaccaatactggacgtggcttcatctgcaactgcccctctggcttc
gaaggtgccacgtgtgagaatgattcccgtacctgtggcagcctgcactgcatgaatggg
ggcacttgtgtctctggccagaagagctccaagtgcttatgcctggggccattcacaggc
cctgagtgccagtacccagtgagcagcccgtgcatctctaacccctgctataatcatggc
acatgcgaattcatccctgagagccctttctaccagtgccattgtcctgccaacttcaat
gggcttttatgccacatcctagactatggtttcttgggtggagtagggcgagacatcacc
ccacctgaatttgaggagaaatgtgagatccctgaatgtaggaaggacactggcaataag
atctgtgacggcaagtgtaataaccatgcttgtggctgggatggtggagactgttccctc
aacttcaatgatccctggaagaattgcactcagtccctgcagtgctggaagtacttcaat
gatggcagctgtgatagccagtgcaacaatgctggctgcctgtttgatggctttgattgc
cagaaagtggaggtccagtgcaatcctctttatgaccagtactgtaaggatcacttcagc
gatggccactgtgaccagggttgcaacaatgctgaatgcgagtgggatggtttggactgt
gctgacaacatgcctgagaagttggcagatgggaccctagtggtggtggtactcatgctc
ccagaaaacctgaagaacaactccttccatttccttcgggagctcagccgagtgttgcac
accaatgtagtcttcaaaaagaatgccaagggagaatacatgatcttcccctactatggc
aatgctgaggagctaaagaaacaccacattaagagatctgcagagagctgggctgatatg
tctggtaccgtcttcgataaagtgaaaacttctctctactcccgagttggagggaggcag
cgaagggagctggaccaaatggacatccgaggatcaattgtctatctggaaattgataac
cgccaatgtatccagtcctcctcccagtgttttcagagtgcaactgatgtggcagccttc
ttgggggccttggcttctatggggaaccttaacatcccctataaaatagaagctgtgcag
agtgagacagtggattccccggagccctcacagttgtatcctatgtacgtggtggtggct
gctttggtgttgttggccttcattggctttggtgttctggtgtcaagaaaacggcgcagg
gaacatggccaactgtggttccctgagggcttcaaagtgaccgagtccagcaagaagaaa
cggcgggagcctttaggcgaggattctgtgggattgaaacccctgaagaatgcctccgac
ggtgccttgatggatgacaaccagaatgaatggggagatgatgacctggagaccaagaaa
ttcaggtttgaagaacaagtcacgcttccagacatggatgaccagacagatcaccggcag
tggacccagcagcatctggatgctgctgacctccggatcccctccatggctcccacccca
ccacagggcgagattgatgctgactgtatggatgtcaatgtcagaggtcctgatggtttt
acccccctgatgattgcttcatgtagtggagggggcctagagacaggcaacagtgaagaa
gaggaggatgctccagctgtcatctcagacttcatctaccagggagctagcctgcataac
caaacagaccgaactggggagacagcccttcatctggctgctcgctactcccgctcagac
gcagccaaacgtctgctggaggccagtgcagatgccaacattcaggataacatgggccgg
actcctctccatgcagctgtgtctgctgatgctcagggggtcttccagatcctgatccgg
aacagagctacagatctggatgctcgaatgcatgatggaaccactccattgattctggct
gcccgcctggcagtggaaggcatgctggaggacctgatcaactctcatgcagatgtcaat
gcagttgatgacttgggcaagtctgccctgcactgggctgctgcagtaaataatgtcgat
gctgctgttgtactgctgaaaaatggagcaaataaggatatgcagaacaacaaggaagaa
acacctctgttcctcgcagccagagaggggagttatgagacggccaaagttctgctagac
cactttgcaaaccgggacataactgaccacatggatcgcctgcctcgagatattgcccag
gagaggatgcaccacgacatcgtgcggcttctggatgaatacaatttggtgcgcagcccg
ccgctgcacaacgggccgctgggagcacccaccttgtctcctccgctgtgctcccccaac
agttacattggcaacctgaagccagctgttcagggcaagaaggcccggaaacccagcacc
aagggactcggttgtaatggcaaggatgccaaagacatcaaggcccgcaggaaaaagtct
caagatgggaaaggctgccttttggacagttccagcgtgctgtcccccgttgactctctg
gagtcgccccatggctatctgtcagatgtggcgtccccgccactgatgacgtctcccttc
cagcagtccccatccatgcccctcaaccacttacccggcatgcctgatccccatctaagc
atcggccacctgaacatggctgggaagcaggacatggctgcgctgggcagcgccagccgc
ttgggctttgatgctgtgccccctcgcctgtcccaccttcctgttgcctctagtcccagc
gctgtcatgggcagcgggtccatgaattttgccgtgggtggagcagccagccttaatggg
cagtgcgagtggctctcgcgactccagaacgggatggtccaaaaccagtataatccactt
agaggaaacatcccagctgggcccctgaacccgcctccccagagcctccagcacaacctc
ctgggaccgctccacaatggcctctccaccactactctgtcccagatgatgagctaccaa
ggtatgcccaacacccggctggccactcagccccacatgatgcaggccccacagctgcag
cagatgcaaccccagcaaaacttgcaacagcagcagaatctgcagcaacagcaaaacctg
cagcaacagcaaaatttgcaacaacagcagcagcagcagcaacagcaacaacaacagcaa
gcgcagcagcacaacacaagctccaccacaaccggccacattggccagagtttcctcggc
ggcgagttgaaccaacaagacgtccagcagctagggagcagtagcatggctgtccacgcc
attctgccacaggagacccagatcctgccaaccaccctgccctcttccctctctcagccc
atgaccaccactcaattcttgacaccaccatctcagcacagttactcttcccccatggac
aacacgcccagccaccagcttcaggttcctgatcatcctttcttaaccccgtccccagag
tcgccggaccagtggtccagctcctctccgcattccaacatctccgattggtcggaaggc
atatcaagccctcctacaagtatgcagtcacagatagcacacattccggatgcttttaag
tga
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integrated database retrieval system
