Gracilinanus agilis (agile gracile opossum): 123243012
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Entry
123243012 CDS
T07702
Name
(RefSeq) histone-lysine N-methyltransferase PRDM9-like isoform X1
KO
K20796
[histone H3]-lysine4 N-trimethyltransferase PRDM7/9 [EC:
2.1.1.354
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas00310
Lysine degradation
gas01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
123243012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gas03000
]
123243012
03036 Chromosome and associated proteins [BR:
gas03036
]
123243012
Enzymes [BR:
gas01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
123243012
Transcription factors [BR:
gas03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
123243012
Chromosome and associated proteins [BR:
gas03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
123243012
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
123243012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SSXRD
SET
zf_PR_Knuckle
KRAB
A2L_zn_ribbon
FOG1-like_PR
Motif
Other DBs
NCBI-GeneID:
123243012
NCBI-ProteinID:
XP_044527105
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Position
3:complement(28257344..28309334)
Genome browser
AA seq
401 aa
AA seq
DB search
MSGDSSSDGSPEEGSQCQGEDAFKDIATYFSKKQWAKLKEWEKIRLKNIKRNYEAMIKIG
LSASRPAFMCRGRQNKKAKVEESGDSDEEWIPKQLVKTLRFPSRTKQRAQPRNKAKKPAD
PKAEGMMDLSEELKTVVMNNLTISEEVKKQMGQMDGICTSNQLTEGKLDCRRKDVEVHIY
SLRERKYQMYQEMWDPQDDDYLFCEECQIFFLDTCPVHGPPTFVQDSAMVKGHPYCSAIT
LPPGLRIGLSGIPGAGLGVWNEASILPLGLHFGPYKGKMTEDDEAANSGYSWMITKGRNC
YEYVDGKEESCSNWMRYVNCARDEEEQNLVAFQYHRQIFYRTCRAIRPGCELLVWYGDEY
GQELGIKWGSKWKRPLTEPTDGETEAQGGKSQRAKTQTQVF
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggacagctcctccgatggaagcccggaggaagggtctcaatgtcagggagaa
gatgctttcaaggatatagccacatacttttccaagaagcagtgggcaaagctgaaagaa
tgggagaaaatccggcttaagaatataaagcggaactatgaggcaatgattaaaatagga
ctcagcgcttctcgcccagctttcatgtgtcgtggcaggcaaaataagaaagccaaagtg
gaggaatctggagattctgatgaagaatggatacctaagcagctagtgaaaaccctgcgg
ttcccatcaagaacaaaacagagggcacagccaaggaataaggccaaaaaaccagctgac
cccaaggcagagggaatgatggatttatctgaggaactgaagacagtagtcatgaataac
ctgaccatctcagaggaagtcaagaaacagatgggccagatggatggaatctgtaccagt
aaccaactgacagagggaaaactagattgcagaagaaaggatgttgaagttcatatttat
agcttgcgggaacgaaagtatcagatgtaccaagaaatgtgggaccctcaagatgatgac
tatctgttctgtgaggagtgtcagatcttcttcctggatacctgtcccgttcatgggccc
ccaacatttgtccaggatagtgccatggtcaaggggcacccttactgctcagccatcacc
ttgccacctgggctaagaattgggctttcaggaatccctggtgcaggacttggtgtatgg
aatgaagcctcaattctaccactgggtctgcactttgggccctataaagggaagatgaca
gaggatgatgaggctgccaacagtggatactcatggatgatcaccaaggggagaaactgt
tatgagtatgtggatgggaaagaggaatcttgctccaactggatgaggtatgtgaactgt
gcgcgagatgaagaggagcagaacttggtggctttccagtaccacagacagatcttttac
cgaacctgccgtgccatcaggcctggctgtgaactccttgtctggtacggggatgagtat
ggtcaagaactgggcatcaagtggggaagcaagtggaaaaggcctctcacagaacccaca
gatggggaaactgaggctcaaggaggtaaaagccagagagccaagactcaaacgcaagtc
ttttga
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