Gracilinanus agilis (agile gracile opossum): 123247416
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Entry
123247416 CDS
T07702
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04721
Synaptic vesicle cycle
gas04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
123247416 (SLC6A4)
04721 Synaptic vesicle cycle
123247416 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gas02000
]
123247416 (SLC6A4)
Transporters [BR:
gas02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
123247416 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
123247416
NCBI-ProteinID:
XP_044532237
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Position
4:complement(488111335..488139942)
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AA seq
629 aa
AA seq
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METTPLNSKKGQSACKDGEDCQGNGILQKGLSATGDKAEMGQISNGYSAVQSPGTEEDTQ
NSIPADTALGTEDHQGERETWTKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPY
TIMAIFGGIPLFYMELALGQYHRNGCISIWKKICPIFKGIGFAICIIAFYIASYYNTIMA
WALYYLISSFTDHLPWTSCKNPWNTDNCTNYFSEGNITWTSNSISPAEEFYTRHVLQIHQ
SEGLEDLGGISWQLTLCIMLIFTVVYFSIWKGVKTSGKVVWVTATFPYIILTILLIRGAT
LPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLPAFASYNKFNNNCYQDA
LVTSIVNCMTSFMSGFVIFTVLGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPAAT
FFAIIFFLMILTLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLAVIIACFFGSLPTL
TFGGAYVVKLLEEYATGPAVLTVVLLEAIAVSWFYGINQFCSNVKEMLGFSPGWYWRICW
VVISPIFLLFIIGSFLSSPPELRLFDYDYPRWTVLLGYCIGTSSFICIPAYITYRLIITP
GTFKERILKSITPETPTEIPFGDLRLHAV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaccccactgaattctaagaaaggacagtcagcctgcaaggatggagaagat
tgccaggggaatggcattctccagaaaggactctctgccacgggggacaaggcggagatg
ggacagatctcgaatgggtactcagctgttcagagccccggcacagaagaggatacccag
aactccatcccagcagatactgccttagggaccgaagatcaccaaggagaacgagagacc
tggaccaagaagatggacttcctcctctcagtcattggctatgctgtggaccttggcaat
gtgtggcgcttcccgtatatttgctaccagaatggaggaggggctttccttatcccctat
accatcatggccatttttggtgggattcctctcttctacatggagctagctctgggccaa
tatcatcgaaatggctgtatttcaatatggaagaaaatttgccccattttcaaaggaatt
ggcttcgccatttgcattattgccttctacattgcctcctactataacaccatcatggct
tgggctctctactacctcatctcttccttcacggatcacctgccctggaccagctgcaag
aacccctggaacacagacaattgtaccaactacttttcagaaggcaacatcacttggacc
tccaactccatatcacctgctgaagaattttatacgcgccatgtcttacagatccatcag
tctgaagggctagaggacttggggggcattagctggcagctgaccctctgcataatgttg
atcttcactgttgtctactttagcatctggaaaggggtcaaaacatcgggcaaggtggtg
tgggtgacggccactttcccttatattatcctaaccatcctgcttataaggggggccacg
ctcccaggagcctggaggggggtccttttctacctgaaacccaactggcagaagcttctt
gaaactggggtctgggtagatgccgctgctcagattttcttctcgctgggtcctggcttt
ggcgtcttaccagccttcgctagctacaacaagttcaataacaactgttaccaagatgcc
ctggtgaccagcatcgtcaactgcatgacgagcttcatgtctggattcgtgatcttcact
gtgctcggttacatggctgagatgaggaatgaggatgtgtccgaagtggctaaagataca
ggacccagccttcttttcatcacctacgcagaagccattgccaacatgccagcggccact
ttctttgctatcattttcttcttgatgatactgactctgggcttagacagcacgtttgca
ggacttgaaggtgtgatcactgccgtgctggatgagttcccccacatctgggccaaacgc
cgggagtggttcgtgcttgccgtgatcattgcctgtttttttggctctctgcccactttg
acttttggaggggcctatgttgtgaagttgctggaggaatatgccactggaccagccgtt
ctcaccgtggtgttgttagaggcaattgccgtgtcttggttctacggtatcaaccagttc
tgcagcaacgtgaaagaaatgcttggtttcagcccgggctggtattggaggatctgctgg
gtagtgatcagcccaatatttctgctgttcatcatcggcagttttctgagcagccccccc
gagttgcgactcttcgattacgattaccctcgctggactgtcctcctgggctactgcatc
gggacttcttccttcatctgcatccctgcctacataacttatcgtttgatcatcactcca
gggacatttaaggagcgaattcttaaaagtatcactccggaaacacctacagaaattccc
tttggggacctccgcttgcatgctgtgtag
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