Gracilinanus agilis (agile gracile opossum): 123248756
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Entry
123248756 CDS
T07702
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas04010
MAPK signaling pathway
gas04020
Calcium signaling pathway
gas04713
Circadian entrainment
gas04925
Aldosterone synthesis and secretion
gas04927
Cortisol synthesis and secretion
gas04929
GnRH secretion
gas04934
Cushing syndrome
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
123248756 (CACNA1H)
04020 Calcium signaling pathway
123248756 (CACNA1H)
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
123248756 (CACNA1H)
04925 Aldosterone synthesis and secretion
123248756 (CACNA1H)
04927 Cortisol synthesis and secretion
123248756 (CACNA1H)
09159 Environmental adaptation
04713 Circadian entrainment
123248756 (CACNA1H)
09160 Human Diseases
09167 Endocrine and metabolic disease
04934 Cushing syndrome
123248756 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gas04040
]
123248756 (CACNA1H)
Ion channels [BR:
gas04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
123248756 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
123248756
NCBI-ProteinID:
XP_044533555
LinkDB
All DBs
Position
1:complement(136856270..137268732)
Genome browser
AA seq
2087 aa
AA seq
DB search
MTDGERRQPLQPLASDEVRVPIASVQAAQPGEEEEEDAASGSKSLQGSVASGASSARERE
LERERAPEPAPEPEQEPEPATETEQEPEPELGAADEEQVPYPALAATVFFCLKQTSRPRS
WCLRLVCNPWFEHVSMLVILLNCVTLGMFQPCEDVECQSERCNILEAFDDFIFAFFAVEM
VIKMVALGIFGQKCYLGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAIN
RVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDNNFARNNN
LTFLNPYYQTEEGEENPFICSSHRDNGMQKCSHIPIRRELRVECTLGLEAYSRSLESPDG
GGRNSCINWNQYYNVCRTGDLNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAH
SFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFS
EPGSCYEELLKYIGHIFRKVKRRTLRLYAAWQKKRREKVNPNGALHGQGVGRRGRKRVPS
IHHLIHHHHHHHHHHYHISNGSPRGPCGSPEVRGDLEPRAGKSGTRLMLPPPPSPGPQGL
PSPAHDAEPVHSIYHADCHVEAPQDQGGRVSRAATAGLKLATGLGGMNYPTILPSAAGGK
GTLALGPVGKKGSGPPVPVVNSSPVSLSADAYGKLQHLVGEHGLCRAPSRLSGLNVPCSL
PSPQAAMLTCELQNCPYCAHILEDPEFELSELESYDSDTNGVYEFTQDLRHGDHRDPIQQ
PPQTPAQSGSRRRGGAHRKKVVGDRSGVACLWAAFGNKLKRIVESKYFNRGIMIAILINT
LSMGIEHHEQPEELTNALEISNIVFTSMFALEMLLKLLAFGLLGYIRNPYNIFDGIIVVI
SVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIF
IFSILGMHLFGCKFSLKTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMAST
SSWAALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSDTDEDKTSANFEEDFEKLRD
LRATEMKMYSLAMTPNGHLEGRGSLPPPLIMRTAATPMLTPKSSPNVDSVPNLLDSRRGS
SVSVDPQHYDQKSMSSLRSSPCANWGPNSTWGSRRSSWNSLGRAPSLKKKSQCGERESLL
SGEGKGSTDDESDDAKPGSAGRASQLRRAESLDYRSTLDLREGLQRLSPRPTALLPLEYQ
DCNGQMVHMPSEFFLRIDSHKEDPSDYDDDMDDSYCFRLKKMLEPYKPEWCKTHEDWSFY
LFSPQNRARVTCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDPNSTERVFLSVSNYIF
TAIFVAEMMVKVVALGFFSGENSYLQSSWNVLDGLLVFVSIIDIIVSMASAGGAKILGIL
RVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGK
FYYCDGPDTRNITTKDDCCAAHYRWIRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLD
AVGINQQPIQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREE
KRLRRLEKKRRSKAIYVSGTLPNTEAQRRPYYADYSPTRRSIHSLCTSHYLDLFITFIIG
VNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAMLKLVAFGFRRFFKDRWNQLDLAI
VLLSIMGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQALPQ
VGNLGLLFMLLFFIYAALGVELFGKLDCSEDNPCEGLSRHATFTNFGMAFLTLFRVSTGD
NWNGIMKDTLRECAREDKHCLSYLPIISPVYFVTFVLVAQFVLVNVVVAVLMKHLEESNK
EAREDAEMDAEIELEMAQSSSAPTAVARGPGPPPGPDGRPPKGGRQAGSPESAGSTKQQA
LEGTGSSRESRNLLVVHKVAVSRMHSLPNDSYMFRPVVPATTPNTLQEVEMETYPATAPT
GSKRTLETLEEEKEKEMTKMARNGKFLGKASEYGYNLREQKLWWRTG
NT seq
6264 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgagagaagacagcccttgcagccgctggctagcgacgaggtccgggtg
cccatcgcgtcggtccaggcagcccagcctggggaggaagaggaggaggatgcggccagc
ggcagcaagtctctccagggcagcgtggcctcgggggcgtcctctgcccgggaacgggag
ctggagcgtgagcgcgcgccggagccagcgccggaaccggagcaggagccggagcccgcg
accgagactgagcaagagccggagccggagctgggcgcagcagacgaggaacaagtcccc
tacccagctctggccgccaccgtcttcttctgcctcaagcagacttcgcggccgcggagc
tggtgcctcagactggtctgtaacccctggttcgagcatgttagcatgctggtgatcctt
ctgaactgcgtgaccttgggtatgttccagccatgcgaggatgtggaatgtcaatcagaa
cgctgtaacatcctggaggcatttgatgacttcatctttgccttctttgcggtggaaatg
gtcataaagatggtcgccctggggatttttggacagaagtgttacctgggagacacatgg
aaccgtctagacttcttcatcgtcatggctggcatgatggaatattctctggatggacac
aatgtcagcctttctgctatccggaccgttcgcgttctccggccactcagagccattaat
agggtgccaagcatgcggatcctggtgacgctgctgctggacacactgcccatgctgggc
aatgtcctgcttctctgtttcttcgttttcttcatctttggcattgtgggtgtgcagctc
tgggctggacttctgaggaacagatgcttcctagacaacaactttgccaggaataacaac
ctgaccttcctgaacccctattaccaaacagaagaaggtgaagagaacccattcatttgt
tcttcacaccgtgacaatggtatgcagaagtgttcccacatccccatccgccgggagcta
cgggtagaatgcacactaggcctagaggcttacagccgctcgttggaaagtcctgatggt
ggtggccgaaactcctgcatcaactggaaccaatactacaatgtgtgcaggactggtgac
ctcaacccgcacaatggagccatcaactttgacaacattggctatgcctggatcgctatc
ttccaggttataaccctggaaggctgggttgacatcatgtattatgtcatggatgcacat
tctttttataattttatatattttatattgctaataatcgtgggctctttcttcatgata
aacctgtgcctagtagtgatcgccacgcagttctcggagacgaagcagcgcgagaaccag
ctgatgcaggagcagcgggcccgctacctctccaacgacagcacgatcgccagcttctcc
gagcccggcagctgctatgaggaactgctcaagtacatcggccacatcttccgcaaagtg
aagcgccggaccctgaggctctacgccgcctggcagaagaagcgccgggagaaggtcaac
cccaacggcgccctccatggacagggggtcgggcgccgcggccgcaagcgggtcccctcc
atccaccacctgattcaccaccatcaccaccaccaccatcaccactaccacatcagcaac
gggagccccaggggtccctgcgggagccccgaggtccgtggggacctggagcccagagcg
gggaagtcggggacccggctcatgctgccccctcccccgtctcccgggccacaagggctc
ccatccccagcccatgatgccgagccagttcacagcatctaccatgccgattgccacgtg
gaagccccccaagatcagggtggccgagtgtcccgggctgccaccgctgggctcaagctg
gccactggacttggtggcatgaactaccccaccatcctgccttcggctgctgggggcaag
ggtactttggccctggggcctgtggggaagaagggcagtgggccgcctgtcccagtagtg
aacagcagtcctgtgagtttgagtgctgatgcctatgggaagctgcaacacttggttggg
gaacatggcctctgcagggctccgagccgcctgtcaggcctgaacgtgccctgttccctg
cccagcccccaagctgccatgctgacatgtgaactgcagaattgcccatactgtgcccac
atcttggaggaccctgagtttgagttgagcgagttggagagctacgactcagacaccaat
ggtgtttatgagttcacccaagacctccggcatggagaccatcgagaccccatccagcag
cccccgcagaccccagcccagagcggatcgaggcggcgaggaggggcccacagaaagaag
gtggtgggggaccgaagtggggtggcctgtctctgggcggcctttggaaacaaactcaag
cgaattgtggaaagcaagtacttcaatcggggaatcatgatcgccatcttgatcaacacc
ctcagtatgggcatagaacaccatgagcagccagaagagttgaccaacgccttggagatc
agcaacatcgtcttcactagcatgtttgccctggagatgctcttgaagttgttggctttt
gggctcctgggctacatcaggaatccttacaacatttttgatggcatcatcgttgttatc
agtgtctgggagattatcgggcagtcagatggaggcctatctgtactccggaccttcagg
ctccttcgagtgctgaaactggtacggttcatgccagccctccgacgacagctggtggtg
ttgatgaagaccatggacaatgtggccaccttctgtatgctgctgatgctgttcatcttt
atctttagtatcctgggcatgcacctcttcgggtgtaaattcagcttgaaaactgacact
ggagacaccgtcccggacaggaagaactttgactccttgctgtgggccattgtcactgtg
ttccagatcctcacccaagaagactggaatgttgtgctttataatggtatggcctccacc
tcatcttgggctgctctctactttgtggccctgatgacctttggcaactacgtgctgttc
aacctactggtggccattctagtggagggcttccaggcagagggagatgcaaatagatct
gacacagatgaggacaagacatcagccaactttgaggaagattttgaaaagctgagagac
ttacgtgccacagagatgaagatgtattcactggcaatgacgcccaacgggcatctggag
ggccgtggcagcctgcctccacccctcatcatgcgtactgcagctacacccatgctgacg
cccaagagctcccccaatgtggattctgtccccaacctcctggactctcgcagaggcagc
agtgtctctgtggatccccagcactacgaccagaagtcaatgtccagcctacgcagctct
ccctgtgccaactggggccccaatagtacatggggcagcaggcgctccagctggaacagc
ctgggccgggcgcccagcttaaagaagaagagccaatgtggggagcgcgagtccctactc
tctggggagggcaaaggcagcacagatgacgagtcagatgatgccaaaccaggctcagca
ggccgggcatcccaactgcgccgagccgagtccctggactaccgaagtacattggacctg
cgagaaggactccaacggctgtccccacgcccaactgccctgctgcccctagagtaccag
gactgcaatgggcagatggtgcatatgcccagtgagttcttcctgcgcattgacagccac
aaggaggacccttcagactatgatgatgacatggatgatagctattgcttccgactgaaa
aagatgttggaaccctataagcctgaatggtgtaagacccatgaagactggtccttctac
ctgttctcacctcagaaccgggcccgggtcacttgtcagaaggtcattgcccacaagatg
tttgaccatgtggtcttggtgttcatctttctcaattgcatcacaatagccctggaacgc
cctgacattgatcctaatagcacggagcgggtctttctgagtgtttccaattacatcttc
acagcaatcttcgtagctgaaatgatggtgaaggtggtggccctgggctttttctctggg
gagaacagctacctgcagagcagctggaatgtgctggatggactgttggtctttgtctcc
atcattgatatcattgtctccatggcttcagctggtggggccaagatcctgggcatcctc
cgggtcctgcgattgctgaggacactgagaccacttcgggttatcagccgagccccaggc
cttaagttggtggtggagaccttgatatcatcccttaggcccattggaaatattgtcctc
atctgttgtgccttctttatcatctttggtattcttggggttcagcttttcaagggtaaa
ttttattattgcgatggaccagacactcgaaacattaccaccaaagatgactgctgtgca
gcccattaccgctggatccggcgcaagtacaactttgataacctaggtcaggctcttatg
tccctttttgtgctctcgtccaaggatggctgggtgaacatcatgtatgatggcctggat
gccgtgggcatcaaccaacagcccatccagaaccacaacccctggatgttgctgtacttc
atctccttcctgctcatcgtcagcttctttgtcctgaacatgtttgtgggcgtggtggtg
gagaatttccacaagtgccggcagcatcaggaggcggaggaagcccgacggagggaggag
aagaggctccggcggctggagaagaagcgtaggagtaaggcgatatacgtgtccggcacc
ctccctaatacagaggcccagcgtaggccatactatgctgactactcacccacccggagg
tccatccacagcctgtgtactagccactacttggacctgtttattaccttcatcatcgga
gtcaatgtgatcaccatgtctatggagcactacaatcagcccaagtccctggatgaagcc
ctgaagtactgcaactatgtcttcaccattgtcttcgtctttgaggcgatgttgaaactg
gtggcctttggattccgtcgtttcttcaaggacaggtggaatcagctcgacctggccata
gtgcttctttccatcatgggcatcaccttggaggaaatcgagatgaatgcagccttgccc
attaaccctaccatcatccgaatcatgcgtgtgctccgcattgctcgagtactgaagcta
ctgaaaatggccactgggatgagggccctactggacacggtggttcaggcactgccccag
gtagggaaccttggcctgcttttcatgctcctgttttttatctatgctgccctgggagtg
gagttgtttggaaagctggattgcagtgaagataacccatgtgagggcctaagcagacac
gccaccttcaccaatttcggcatggccttcctcactctcttcagagtgtctacaggggac
aactggaatggaatcatgaaggacacgctgcgggagtgtgcccgtgaggacaagcactgc
ctgagctacctgcccatcatctcgcccgtctacttcgtcaccttcgtcctggtggcccag
ttcgtgctggtcaatgtggtggtggctgtgctgatgaagcacctggaagaaagcaacaag
gaggcccgtgaggatgcagagatggatgctgagattgaactggagatggcacagagcagc
tccgctcccaccgctgtggcccgaggcccggggcctccccctggcccagatggtcggcca
cccaaagggggccgccaggctgggagccctgagtctgcagggtccacgaagcagcaagct
ctggaaggcactggctcttccagggagtcccgaaaccttcttgtggtacacaaggttgct
gtgtccaggatgcactccctacccaatgacagctacatgttccggcctgtggtgccagcc
acaaccccaaacacactgcaggaggtggagatggagacctacccagcgacagccccaaca
ggttcaaaaagaactctggagaccctggaagaggagaaagagaaagaaatgacaaagatg
gcaaggaatggcaagtttttaggcaaggcttctgaatatggctacaacttgagagaacag
aagctctggtggaggacaggataa
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integrated database retrieval system
