Gracilinanus agilis (agile gracile opossum): 123251351
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Entry
123251351 CDS
T07702
Symbol
CLP1
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1 isoform X1
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
gas
Gracilinanus agilis (agile gracile opossum)
Pathway
gas03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gas00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123251351 (CLP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gas03019
]
123251351 (CLP1)
Enzymes [BR:
gas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
123251351 (CLP1)
Messenger RNA biogenesis [BR:
gas03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
123251351 (CLP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
ATP_bind_1
AAA_18
MMR_HSR1
AAA_16
AAA_22
TniB
CbiA
nSTAND3
Motif
Other DBs
NCBI-GeneID:
123251351
NCBI-ProteinID:
XP_044536531
LinkDB
All DBs
Position
6:278809969..278817030
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AA seq
426 aa
AA seq
DB search
MAEESNDEKKPLAKFELERETELRFEVEASQSAQLELLAGMAEIFGTELTRNKKFTFDAG
AKVAVFTWHGCSLQLSGRTEVAYVSKDTPMLLYLNTHTALEQMRRQAEREEERGPRVMVV
GPTDVGKSTVCRLLLNYAVRLGRRPTYVELDVGQGSVSIPGTMGALYIERPADVEEGFSI
QAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSGYQ
ALVHAASAFEVDVVVVLDQERLYNELKRDLPHFVRTVLLPKSGGVVERSKDFRREYRDER
IREYFYGFRGCFYPHAFNVKFSDVKIYKVGAPTIPDSCLPLGMSQEDNQLKLVPVTPGRD
MVHHLLSVSTAEGTEENISETSVAGFIVVTSVDLEHQVFTVLSPAPRPLPKNFLLIMDIR
FMDLKR
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaatccaatgatgaaaagaagcccctggctaagttcgagttagaacgagag
acagaactgcgttttgaggtggaagcctcccagtcagcccagctggaactattggctggc
atggctgagatctttggtacagaactgactcgaaacaaaaagttcacttttgatgcaggt
gccaaagtggctgtctttacttggcatggctgttctcttcagctgagtgggcgcaccgag
gtggcttatgtctccaaggacacccccatgctcctttatcttaacactcacacagccctg
gaacaaatgaggcggcaagcagagcgtgaggaagagcgaggtccccgagtgatggtagtc
ggccctacagatgtaggcaagtccacagtgtgccgtctattactgaattatgctgtgcga
ctaggccggcgacccacctatgtggagctagatgtcggccaaggctcagtgtccattcct
ggaactatgggagccctttacatcgagcgacctgctgatgtagaggaaggtttctctatc
caggccccattagtctatcattttggttctacaacacctggtaccaacatcaagctttat
aataagatcacatctcgacttgccgatgtcttcaatcaacggtgtgaggtgaaccgacga
gcctctgtcagtggctgtgtcattaacacctgtgggtgggtcaagggctctggctaccag
gctctggtgcatgctgcttctgcttttgaggtggatgtggtggtagtactggaccaggaa
cgactgtacaatgagctaaagcgggacttgcctcattttgtgcgcactgttctactccct
aagtcaggaggagtggttgaacgttcaaaggacttccgtcgggagtatagggacgagcgc
atccgagaatatttctatggcttccgaggctgcttctatccccatgccttcaatgtcaag
ttctctgatgtgaaaatctacaaggtgggggcacccaccatcccagactcatgtcttcct
ttgggaatgtcacaggaggacaatcagctgaaactggtaccagtcaccccagggcgagat
atggtgcaccacctcttgagtgtcagcacagctgagggcactgaggagaacatctctgag
actagtgtggctggcttcattgtggtgactagtgtggacctggagcaccaggtctttact
gtgctctctccagcccctcgcccactacctaagaacttcctcctcatcatggacatccgc
ttcatggatctcaagcgctga
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