Gasterosteus aculeatus (three-spined stickleback): 120817503
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Entry
120817503 CDS
T07457
Symbol
setdb2
Name
(RefSeq) histone-lysine N-methyltransferase SETDB2 isoform X1
KO
K18494
[histone H3]-lysine9 N-trimethyltransferase SETDB2 [EC:
2.1.1.355
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat00310
Lysine degradation
gat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120817503 (setdb2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120817503 (setdb2)
Enzymes [BR:
gat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
120817503 (setdb2)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120817503 (setdb2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
120817503 (setdb2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pre-SET
SET
MBD
GIY_YIG_domain
Motif
Other DBs
NCBI-GeneID:
120817503
NCBI-ProteinID:
XP_040029730
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All DBs
Position
I:complement(29536576..29542875)
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AA seq
616 aa
AA seq
DB search
MEENQLDPLEVERAKSFWAEEDVDQVFSGVFEYLGNLKRVLKKNTASDKEYVQGLKLLDS
LKGPPASSQEPSVVQVVIGSDEPRLAKFSHSSSTTPPNGTSGSAAPPSGREELLPPLTPV
QLQYEPHPCCKACLPCLPIMPQCTPAFWGQNPLKVPLLCGFKRLSAVPLMMSLRGAEPPL
SAEEEDWDVLYKAPCGQSLRNHDDVMRFLLATESYDVLQVDFFTFNPSVQLDPPPPAGPP
CPVMDLSRGLEPTPVQLCVGDGGARPAEFRYRKDRWPHGCFLSRGPALFQVCCDCSDGCS
DAQRCACAAATAGGRRYRYHRLPESVPSGVYECGPWCGCVRARCQNRLVQRGIRVRLQVF
RTDRRGWGVCCRDDLDRGTFVCIYAGVTLQKGKSSAEPSPPKLTRTDVPSDDEVEVVTEW
PPPPALESRSTLLEPPQPTSPPLHVPVIQSPAEAPPPDRDQLRPQTVLVGVPEPPSGDPP
PPLGKDFAMTTETTVSGVNRTETQRSLKRPMEAEDVYFLDASKEGNVSRFINHSCRPNLF
VQNVFTDCHDSGFPVVAFFTSTVVKAGSELTWKYSTDNKSQLEVPCLCVSNGCQGHFSIG
EELCDVCEVKGQGETQ
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaccagttggatcctttagaagtggagcgagctaaatccttctgggccgag
gaggacgtggaccaggtgttcagtggcgtgtttgagtacctgggtaacctgaagagggtc
cttaagaagaacacggcctctgataaagagtatgttcagggcctgaagctgctggatagt
ctcaaaggacctccggcctcctctcaggaaccctccgtggtccaggtggtcatcggctca
gatgagccacgactggccaagttctcccactcgtcctccaccaccccccccaacgggaca
tccggctcagcagcccccccttcagggcgagaggagctgcttccacctctgacccccgtc
cagctgcagtacgagccccacccctgctgcaaggcctgcctgccctgtttacccataatg
cctcagtgcacccctgcattctggggtcagaaccccctcaaggtgccgctgctctgcggc
ttcaagaggctgagcgccgtgcccctgatgatgtcacttagaggggcggagccacccctc
tccgccgaggaggaggattgggacgtcctctataaagcgccatgtgggcagagcctccgt
aaccacgacgacgtgatgcgtttccttttggccacggagagctacgacgtcctgcaggtg
gacttcttcacctttaacccctcggttcagctggacccgcctcctccggcgggccccccg
tgcccggtgatggacttgagccgggggttagagcccacgccggtgcagttatgcgtcggg
gacggcggcgctcggcctgccgagttccgctacaggaaggaccgctggccgcacggctgc
ttcctgtcccgcggcccggcgctgttccaggtttgctgcgactgcagcgacggatgcagc
gacgcgcagcgctgcgcctgtgccgctgccaccgcgggggggcgccgctaccgctaccac
cgcctgccggagtccgtcccatcaggcgtgtacgagtgcgggccctggtgtggctgcgtc
cgggcccgctgtcagaaccgcctggtccagagagggatccgggtccgcctccaggtcttc
cggaccgaccgcagaggctggggcgtgtgttgccgcgacgacctggaccgcggcacattc
gtgtgcatctatgcaggtgtcacgctgcagaagggaaagagcagcgctgagccgtcgccc
cccaagctgaccaggacggacgtcccgtcggacgacgaggtggaagtggtcactgagtgg
ccccccccccccgcgctggagagccggagcaccttgctggagcccccccaacctacatcg
ccccccctgcacgtccccgtgatccagagccccgccgaagccccgccgcctgaccgggac
cagttgcgtccccagacggtgctggtcggggtcccggagcctccgtcaggtgacccccct
ccgcccctgggcaaggactttgccatgacgacagagacgacagtcagcggcgtgaacagg
acggagacgcagaggagcctgaagaggccgatggaggcggaggacgtctacttcctggac
gccagcaaggagggaaacgtgagccgcttcatcaaccacagctgcaggccgaacctgttc
gtccagaacgtcttcaccgactgtcacgactccggcttccccgtggtcgccttcttcacc
agcacggtcgtgaaggccggctctgagcttacatggaagtactccaccgacaataaaagc
caactggaagtgccctgtctctgcgttagcaacggttgccagggacatttttctattggc
gaggagctgtgtgacgtgtgtgaggtcaaaggtcaaggtgaaacacagtaa
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