Gasterosteus aculeatus (three-spined stickleback): 120819441
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Entry
120819441 CDS
T07457
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C-like isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04020
Calcium signaling pathway
gat04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120819441
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120819441
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120819441
Ion channels [BR:
gat04040
]
Ligand-gated channels
Glutamate (ionotropic)
120819441
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
MatE
Motif
Other DBs
NCBI-GeneID:
120819441
NCBI-ProteinID:
XP_040032786
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All DBs
Position
V:complement(8197222..8235431)
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AA seq
1397 aa
AA seq
DB search
MVVPRGHPPPFPWPPLFLLILLLTSPLRLEARPLLLHPSINVAVVLSGSSYQNEVRGRLG
GENFVDLPIVVSPVIVLVNDTNPRDLLTRLCDTMAMEKLHGVVFEDDVGAGADTQVAEVA
QILDFLSTQTALPIVGISGGSAVVIPYKTEGSSFLQMGASLEQQIISMFKLMEEYDWGEF
AVITSLLPGYDTFVDIIQSYTDTSYFLWNLQDILTLEMSVGSNDGRTKRLLQQVDSQVLM
AYCSFEEAQYLFQQAAEVGLLGPGYIWMLTSQAVGNPDFPPPVSFPIGVIGVITDQWRKN
LRQRVREGVAIVAKGAESFKNQYGFIPEGHGNCNKMAKHSDNNTLFRHMLNVTWERKDLS
FNNQGFLSNPSMVIVALDRDRLWDKVGTYAQGILQVRYPVWPRYGSFLEHVSDDRHLTVA
TLEEHPFVMVENVDPGTGTCVRNTVPCRRQSNYTASGEATEWNVMGHAESYTKLCCKGFC
IDILKKLSRTIKFSYDLYLVTNGKHGKLVRGTWNGMIGEVVYRRADMAIGSLTINEERSE
IIDFSVPFVETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYLS
PVGYNRSLVSAKTPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVI
FLASYTANLAAFMIQEQYIDTVSGLSDKKFQKPHEHYPPFRFGTVPNGSTERNIRSNYPD
MHMHMTKYNQKGVEEALESLKTGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTG
YGIALQKDSRWKRLIDLALLQFLGDGDTQRLETVWLSGICQNEKNEVMSSKLDIDNMAGV
FYMLLVAMGLSLLVFAWEHLLYWKLRHSLRKSHKLDFLLAISRGIYSCYKGMEDPGHSSG
FAKPDLTSNYAQANMLKMLRTAKDLVSTANVETSLDNATKTIQQLSRHGGSLPVRIPQVA
MEAVPGGFAYITENHCPLTPPLTAVSSLKQQRGVARPTPLRYTLPTRSTPCLYDRPLPVS
SLSSPHLAMGEQPPHQHLHQYQTTGRLYIDPHSQLPYIPYTDLQLPDIYASHPVSLPQNQ
HGQAGFSQRKRRSKSFQCEDGDLERRKHRDQEKKGISPVYLSELKANHLQENHISAPNVN
SMYSGERRCPRVENYSSWPPEDLMLRGRRRHRRPSFLKATWGSEQVRQLDESQSSLSSQS
PSTLPDLFPCILTPTTPAKPYNPAQLRNSLCLPRNQAYLHIREDQRRANGRKVQKLRHSH
STHLPTYGEAVRHGTGLGRGMVRRATSLLSRQYAHYLNSYPGLPIYHGPLDLQHHSQASS
NHPGASPVCQLLACGGGRCGSQRALLYQDSVYGAYGVYQGSQTGSEALAGQAARAQPAGS
PCVLRPWRRVSSLESEV
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggtcgttcccaggggacatcctcctccctttccttggcctcctctcttcctcctcatc
ctcctcctcacctccccgctccggctggaggcccgaccgctcctcctccacccatctatc
aacgtggctgtggtgttaagcggctccagctaccagaatgaggtcagaggtcgcctcggc
ggggaaaactttgtggacctgcccatcgtggtcagccctgtgatcgtgctggtcaacgac
accaacccccgagacctgctgacgcgtctctgcgacaccatggccatggagaagctacac
ggcgtggtgttcgaggacgatgtgggcgctggtgccgacactcaggtggccgaggtggcg
cagatcctggacttcctctccactcagacagctctgccgatcgtgggcatcagtggcggc
tctgcagttgtcataccgtacaagactgaaggatcctccttcctgcaaatgggagcatct
ctggagcagcagattatcagcatgtttaagctaatggaagagtacgactggggcgagttt
gcagtgataaccagtttgctaccgggatacgacacctttgtagatataattcagtcctac
acggacacctcgtatttcctgtggaatctacaggatatcttgaccctggaaatgtctgtt
ggctcgaatgacggaaggaccaaacgcttgctgcagcaggtggattctcaggtgctgatg
gcgtactgctcttttgaggaggcgcagtacctgtttcaacaggcagctgaggtgggtctg
ctggggcccggctacatctggatgctcaccagtcaggccgtcggcaaccccgacttccct
ccacccgtcagcttccccatcggcgttattggcgtgattacggaccagtggaggaagaac
ttgcggcagagagtgagggaaggtgttgccatcgtagcgaaaggagccgagagcttcaag
aatcagtacgggttcattcccgagggacacggcaactgcaacaaaatggctaaacactca
gacaacaatactctgttcaggcacatgttgaatgtgacgtgggaaaggaaagatctgtca
ttcaataatcaaggcttcctctccaatccctccatggtcatcgtcgctctggaccgagac
agactctgggacaaggtcgggacgtacgctcaagggatcctccaggttcgttacccggtc
tggcctcggtacggcagcttcctggagcacgtgtccgatgaccgtcacctgaccgtggcc
acgctggaggagcatcccttcgtcatggtcgagaacgtggacccgggcaccggcacgtgt
gtccgcaacacggtgccctgcaggcgccagtccaattacacagcgagtggcgaggccaca
gagtggaacgttatgggccacgcagagtcctacaccaaactgtgctgcaagggcttctgc
atagacatcctgaagaaactgtcccgcaccatcaagttctcctatgacctctacctcgtc
accaacgggaaacacggcaagctggttcgcgggacgtggaacggcatgatcggagaggtt
gtgtacagacgagccgacatggccatcggctctctcaccatcaacgaggagcgctcggaa
atcatcgacttctccgtgccgtttgtcgagacgggcatcagcgtcatggtggcccgcagc
aacgggacggtttccccgtctgccttcctcgagccctacagcccagcagtttgggttatg
atgttcgtgatgtgcctgaccgtggtggcggtgacagtttttgtgttcgaatacctcagt
ccagttggttacaaccgaagcctggtgagcgccaaaacacctggtggcccaacattcacc
atcgggaagtcagtgtggctgctgtggggcatcgtcttcaacaactcggtccccatcgaa
aacccgaagggaacaaccagtaagatcatggtcctggtctgggccttcttcgctgtgatc
ttcctggcctcatacactgccaacctggctgccttcatgatccaggagcaatacatcgac
acagtgtccgggctctccgacaagaagttccaaaaaccgcatgagcattaccctcctttt
cgcttcgggacggttccaaacgggagcacagagaggaacatccgcagcaactaccccgac
atgcacatgcacatgacaaagtacaaccagaagggggttgaagaagctctggaaagcctc
aaaaccgggaagctggacgccttcatttacgacgctgcggttttgaactacatggctggg
aaggacgagggctgcaagctggtaaccatcggcagcgggaaagtgtttgccaccacggga
tacggcattgctctgcagaaggactcccgctggaagcgtcttattgacctggcgctgctg
cagttccttggagacggagacactcagcgcttagagaccgtgtggttgtcgggcatctgc
cagaacgagaagaacgaagtgatgagcagcaagctggacattgacaacatggcgggcgtc
ttctacatgctgctggtggcaatgggcctcagcctgctggtctttgcctgggaacacctg
ctttactggaagctacgacactccctccgcaagtctcacaaactcgacttcctgttggcc
atcagcaggggtatttacagttgttacaagggaatggaggatcctgggcattcgtctggt
tttgcaaaaccagacctgacctccaactacgctcaagcaaacatgctaaagatgcttcgc
actgccaaggacctagtctccactgccaatgttgagacctctctggacaacgccaccaag
accatacagcagttaagtcgtcatggcggcagcttgcccgttcgtattccacaggtggca
atggaggctgtgccaggaggatttgcttatattacggagaatcattgccccctaacccca
cctctgaccgctgtttcctccctgaaacagcagaggggagtcgccaggcccacgccactg
cgctacacgctcccgactcgctctactccatgtctgtatgaccggccacttcctgtgtcc
agcctcagcagcccccacctggccatgggtgagcagccacctcatcagcacctgcaccag
taccagacgacaggaagactgtacatagacccccattctcagttgccctacatcccctac
acagatctccaactccctgacatctacgcctctcatccggtctccctgcctcaaaaccag
catggccaagcgggcttctcccaacggaagaggaggtccaagagtttccagtgtgaggat
ggggatttagagaggagaaaacacagagaccaggaaaagaaaggcataagtccggtctat
ctgagtgaactcaaagccaaccacctccaagagaaccacatctccgcccccaatgttaac
agcatgtactcaggggagaggaggtgtcctcgggtagagaactacagctcctggcccccg
gaggatctgatgctgagaggaagacgcaggcaccgccgtccctccttcctcaaagcgact
tggggcagcgagcaggtgcggcagctggacgaatcccagtcatccctgtccagccaatcc
ccttccaccctgccagacctgttcccatgcattcttacaccaaccacacctgcaaagccc
tacaaccccgcccaacttcgaaacagcctgtgcctccctaggaaccaggcctacctccac
ataagggaggaccagaggagggccaatgggcgcaaggtccagaagctgcgccactcccat
tccacccacctacccacgtatggcgaagcagtacgacacgggacagggttagggcggggg
atggtacggagagccaccagcttgctcagcagacagtacgcccactacctgaactcgtac
cctggactacccatctaccatggccccctagacctacagcaccacagccaggcttccagc
aaccaccccggtgccagcccggtgtgtcagctgctggcttgtggtggcggaagatgtgga
agccagcgggctctgctctaccaggacagtgtgtatggggcttatggggtctatcagggt
tcccagactggatcggaggccttggcaggtcaggcagcaagggctcagcctgcagggagt
ccctgtgtacttcgcccatggcgaagggtgtccagtctggagtctgaggtctga
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integrated database retrieval system
