KEGG   Gasterosteus aculeatus (three-spined stickleback): 120825588
Entry
120825588         CDS       T07457                                 
Symbol
polq
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase theta
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:gat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gat03400]
    120825588 (polq)
Enzymes [BR:gat01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     120825588 (polq)
DNA repair and recombination proteins [BR:gat03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    120825588 (polq)
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C ResIII DUF4332 HHH_5 Helicase_dom4_arc
Other DBs
NCBI-GeneID: 120825588
NCBI-ProteinID: XP_040043199
LinkDB
Position
IX:complement(1425777..1439963)
AA seq 2637 aa
MSTSGPPSKKKSYMGQHQVKKKQCFQAADGSRLVQKPHVVSGKSNMSKDGLSDGGAGEST
SALDEEILQVSDAVDPVRPARPTTPNGGARKKPAAPHRGTREGGRGPVGDGERPGGRADC
KDLAQRLLFGEDSEEAEYAPRGPEDTRPPPASSRINATSRQGIKNAPQAGSSSSEQKLPS
RRKSSPPSGSKVEADPPLDVSRDYILFSPGRLAAAAKKAKLQPSFQNQSASVLVVPSGLD
LSTLSDTLPQQGIAFCAPAGQAEKLLLCNWGLPKAVLACYQKHGVTHMFEWQAQCLAVGQ
ALQGGNLVYSAPTSAGKTLVSELLMLKRVLETKRKALFILPFVSVAKEKMHYLRSVFEEA
GVRVEGYMGGTSAAGGFAALDVAVCTIEKANSLVNRLIEEDDMALLGMVVVDELHMVGDS
GRGYLLELLLTKIRYIAQKQNATGSLSEGVQIVGMSATLPNLALLASWLGAELYQTDYRP
VPLHEHLKVGRDIYDKSLAAVRRFTPALRVKGDDDHIVSLCYETVSEGRSVLLFCPSKNW
CEKLSDSIAREFYNLRHADRQGEAEPKPVGLDREGLVDVVAQLRRTPAGLDPTLQRTVPW
GVAFHHAGLTFDERDVLEGAFRQSTIKVLAATSTLSSGVNLPARRVIIRSPTFNGHLLDP
LTYKQMAGRAGRKGVDTIGESVLVCKEAERQKGIILLKGVLQPISSCLVRREGDGVTTSM
LRAILEIIVGGVASTPQDVRSYALCSLLAASVKRNGKEAAMEDTNKGAIEACVEWLMENE
FISVQKDGQAERYHPTQLGAATLSSSLSPPEALGIFADLQRAMKGFVLENDLHILYLITP
LHAEWTTIDWYQFFCQWEQLSSSMKRVAELVGVQEGFLARSVGGKLVAKTEKQRRQMAVH
KRFFTTLVLHDLVNEVPLGAVASKYNCNRGQLQSLQQSASTYAGMVMVFSKRLGWHNMEL
LLSQYQTRLSFGVQRELVDLVRVSLLNATRARALYAQGLCTVAELARATAADVEKALRNA
VPFKSSKRAVDESEVEAAERRGLRCVWVTGGRALTEPEAASEIVSEARLLLREDLAQLGV
EWDPTAVPPGAPAARGGPDARSAMRRTSQEARGDNAKDVQEGDGVEEREGGDTAGHGEAN
RFERAMSGNKMEKAEGGGRGNSRGVDGAAPDIRQTVNAVQGERSXGANKTSATADDSEDE
REKRXDRSERCEELAPKEGGVPVGPETCPGTRPGPERSLTQELAEIVSSPLFPSEAHPQP
SSAPMPAPRFRAPVSRGEERHRVPTSELAESPAQPGRLKHSKALRKVLHSIQTDKGPQDP
VEPSAVPSVQNPSPGDGRAARTTRADRLDSPRDASPAPVPLFSPEAKRRRTDSREADTFS
SPELYAADEEEAEGPVRKGEESFGDSLELDTQTERLIVQRQDGTIGHPSAGSEENRGEET
AAAAHEGSSARPRFNISITDSQMELILDSSPPLSAGPGGDDGAEGGGDDQSINRSSSFLF
DSLHGSSTPCLSPPPTSGQSDEEEEPAGREVGGPPPSTQERRRSELLANQEAERQEAVQW
GESSFNLSEWGDSLLVGERFLERRSLLRRSEGTEEGQRPGGEDVRTTEPPSESQPEPTTT
TTSPNEYDEDNGQGLARKTKRGGRQEVANEEGGNVETEEINTLLSADAVLKQVQESTESS
FSCSHGLQEIFDRWPSMSDQPLPNTTAASGACENAANTPRVPDRPPSLTQGVRDGAKRDA
RAAGSGSPEAESDPKSAAERPGSAGDLIPPTQETAPVTPRVKLTTSSVRSPLVAQPIDRS
ASSTLRPRKPAIAKRPGSLTGHGDPPSEAIARTKRPDSTSDPDRRRRPRHSPSPASPQPK
PPPPPPAAESPEAAGASALQQPQDASLTPSCSGSFSIVDVASDRRLFDAFVKEWKTKERY
SLALACERREHGQKPEEQIGKPKRASAAQPKLHSGDGFPVRGRDGLVLIGLAVCWGARDA
YYVSLQQEQSKGLSSSLAPPPLDHNLTVGERLRRAKTCLTAPAAAHGASVVVAYDIIEVY
KSLVLSCGVSLGGSSEDPKVACWLLDPGSEERTLPNMVTVYCPAELPLLDGLGNAHAHCP
RVRAATESVLALSVMNHLAGLLEKDGMLGVFRSVEMPSQVSLAVLELNGMGFSVQESERQ
KHVMQAKLAALESQAYDLAGHSFSLTSVDDVAQVLFFDLHLPPNGDVGGPKSKKTLGYTR
RGVGGRVRLGKQFSTTKDVLEKLRPLHPLPGVILEWRRITNALTKVVFPLQREKRYHTGL
AMDRIHPIAQTHTATGRVSFTEPNVQNVPKDFEIHMATVVGESPPSQGGCHVTSRSGRKR
RSVVPRAAAGCAIQGPAFSVSMRHAFVPFSGGMILAADYSQLELRVLAHLSKDQRLLQVL
NGGADVFRCIAAEWKSVDPESVQDDLRQQAKQICYGIIYGMGAKSLGEQMGVEEDDAACY
IESFKARYKGINAFLRETAKNCAKSGYVQTLMGRRRYLPGITDANAHAKAHAERQAVNTT
VQGSAADIVKLATVNIQKRLREAYPAAPLSHQHARPGESHSPARPPGRRGVGASRLRGAY
FVLQLHDELIYETTEEDLIQVAQIVKREMESAVKLYVKLKAKVKAGPSWGNLEDLDI
NT seq 7914 nt   +upstreamnt  +downstreamnt
atgagcacctcaggtcctccctcgaagaagaagagctacatggggcagcaccaggtcaag
aagaagcagtgtttccaagctgctgacgggagcaggctggtccaaaaaccccacgtcgta
tccggcaaatcgaacatgagcaaagacggcctctcggacggaggagcgggagaatccaca
tcggctctcgacgaagaaattctgcaggtgtcggacgccgtagacccggtgaggcctgcg
cgtccgaccacgccaaacgggggtgcgcggaaaaagccggcagcgccgcaccgcggcacc
cgggaggggggccgggggcctgttggcgacggggagcgaccgggagggcgagccgactgc
aaagacctggcacagaggcttctcttcggcgaggactctgaggaggcggagtacgctccg
aggggcccggaggacacccggcccccaccggcttcctcccgcatcaacgcaacgtcccgt
cagggcataaaaaacgctccgcaagcaggcagctccagcagtgagcagaagcttccgtcc
aggagaaaaagctctccacctagcgggtcaaaggtggaggccgatccacccctggatgtg
tccagggactacatcttgttcagcccgggccgcctcgcagccgcggcgaagaaggccaaa
ctccagccgtcattccagaaccagtccgcttctgtgctcgtggtccccagcggtttggac
ctgagcactctcagcgacacgctgcctcagcaaggcatcgccttctgtgctccggcgggg
caagccgaaaagctgctgctctgcaactggggcttaccaaaggctgtcctggcgtgctac
cagaaacacggcgtgacccacatgttcgaatggcaggctcagtgcctcgctgtcggacag
gcgctgcagggaggcaacctggtgtactcggcccccacgagtgcgggtaaaactttggtg
tcggagttgctgatgttgaagcgcgtgctggagacgaaaagaaaggctctcttcatactg
ccattcgtctccgtggctaaagagaagatgcattaccttcggagcgtgtttgaagaggca
ggagttcgcgtggagggatacatgggcggcacctcggctgctggaggattcgcagcgctg
gatgtggccgtgtgcacgatcgaaaaggccaattctctcgttaacaggctcattgaggag
gacgacatggctctgctaggtatggtggtggtggacgagttgcacatggtcggtgactct
ggaagaggatacctactagaactgctcttaaccaaaatccgctacatagcgcagaagcag
aacgccactgggtctctctctgagggcgtgcagatcgtgggcatgagcgccaccttgccg
aacctcgccctcctggccagctggttgggtgcagagctttaccagacggactacaggccc
gtaccgctgcatgagcatctcaaggtgggccgcgacatctacgacaagagcctggccgcc
gtccggcggttcactccggctctccgcgttaagggcgacgacgaccacatagtgagcttg
tgctacgagacggtgagcgagggccgctcggtgctgctgttctgcccctcaaagaactgg
tgtgagaagctgtcggacagcatcgccagagaattctacaacctccgacacgccgatcgt
cagggcgaagcagagccgaagccggtgggtctggatcgggagggactcgtggacgtcgtg
gcccagttgagacgaactccagctggtttggacccgaccctccagcgaacggtgccgtgg
ggggtggccttccaccacgccggtttgacgtttgatgaacgcgacgtgttggagggagcc
tttcgtcagagcaccattaaagtcctggccgcgacctccaccctctcctcgggggttaat
ctcccggctcgcagggtcatcatccgcagcccgaccttcaatggacacctgttggacccg
ctcacgtacaaacagatggcagggcgggcggggagaaaaggcgtggacaccataggcgag
agtgtgctggtgtgcaaggaggcggagcgtcagaaaggtatcatcctcctcaagggcgtt
cttcagccaatcagcagctgcctggtgagaagggagggagacggagtcaccaccagcatg
ctgcgagccatcttagagatcatcgtcggcggggtggccagcactccacaggatgtgcgc
tcgtatgcgttgtgctcgctgctggctgccagcgtgaaaaggaacggcaaagaagcggcg
atggaggacaccaacaaaggcgctatagaggcctgtgtcgaatggctgatggagaacgaa
tttatcagcgtccagaaggacggacaagcggagcgctaccatccgacccaactcggtgct
gccaccctttcctcgtccctctcgcctcccgaggctctgggaatatttgcagatctccaa
cgggccatgaagggctttgtgcttgaaaatgacctgcacattctctatctgatcacgccc
ttgcacgcagagtggaccaccatagactggtaccagttcttctgccagtgggagcagctg
tcgtcgtcgatgaagagagtagcggagctggtgggcgtccaggaaggtttcctggcgaga
tctgtcggcgggaaactcgtcgccaagacggagaagcagcggcggcagatggctgttcac
aagcgctttttcacgacccttgtgctgcacgatctggtgaacgaggtgcctctgggagca
gtggcctcgaaatacaactgcaaccgcgggcagctgcagtccctccagcagtctgcttct
acttatgcaggtatggtgatggtgttttccaagcgcctgggctggcacaacatggagctg
ctgctgtcccagtaccagacccggctgagcttcggggtccagagggagctggtggacctc
gtcagggtctccctgctaaacgccacacgagccagagcgctgtacgcgcagggcctctgc
acggtcgctgaactggcccgggctacagcggccgatgtggagaaagccctgaggaacgcc
gtcccgttcaagagctcgaagcgcgccgtggacgagagcgaggttgaggcggccgagcgc
cggggcctccgctgcgtctgggtcaccggcggccgggccctgacggagccggaggccgcc
tccgagatcgtctccgaggccaggctgctccttcgggaagacctggcgcagttgggagtc
gagtgggacccgacggctgtcccaccgggggctcctgctgcgcggggcggcccggacgcc
cggtctgcaatgcgtcgcacctcacaggaagcgcggggcgacaacgcaaaagatgtccag
gaaggagacggggtggaggaaagggagggtggagataccgccggacacggggaggcgaat
agatttgagagagcgatgtccggaaataaaatggagaaagcggaaggaggcggccgaggg
aactctagaggggtagacggggcggcgccagatatcagacaaacggtaaacgcagtgcaa
ggggagagaagcnngggggcaaataaaacatcagcgacggcggatgactctgaagatgaa
agagagaagcgcnacgaccgatccgagcggtgtgaggaattggcgccgaaagaagggggc
gtcccggttggaccagagacgtgtccagggacccgtcctggtcctgaaaggagcctgacg
caggagttggccgagatcgtttccagcccgctgtttccgtcagaggcgcatcctcagccc
tcctccgccccaatgcccgccccccgctttagagcgccggtgtcccgcggggaagaacgc
caccgagttcctacctcggagctcgccgagtctcccgcgcagccgggacgactgaagcac
tcgaaagccttaaggaaagtcctccactccatacaaactgacaaaggcccgcaggatccc
gtcgagccctcggcggttccctcagtccaaaatccgtcgcctggagacggtcgagctgct
cgaacgaccagggcagataggctagactccccgcgggacgccagcccggcccccgttccg
ttgttctcccccgaggcaaagcgccgcaggacggacagcagggaggcggatacgttctcg
tcccctgagctgtacgcggcggatgaagaagaagccgaggggcccgttaggaagggggag
gagagtttcggcgacagcttggaattggacacccagacggagagactcatcgttcagcgc
caagatgggaccatcggccatccgtcagcaggatcggaggagaacaggggggaggaaacg
gcggcggcggcacacgagggaagtagtgcacgtccaagattcaacatttccatcacagac
agccagatggagctcatcctcgacagcagccccccgctctctgcgggtcctggtggggat
gacggcgctgaaggtggaggcgatgaccagagcatcaacagaagcagcagcttcctgttt
gacagcctgcacgggagctccacgccctgtctgagcccgccgccgacatccggccagtcg
gacgaagaagaggagcccgccggccgggaggtcggaggcccgcctccgtcgacccaggag
cggaggcgcagtgagcttctcgccaaccaggaggcggaaaggcaggaggccgtccagtgg
ggcgagtcctccttcaacctgtcggagtggggcgactcgctgctggtcggcgagcgcttt
ctggagagacggagcctgctcaggaggtccgagggaaccgaggaaggtcagcgacccggc
ggcgaggacgttcggaccacggagccgccgtcggagtcacaacccgaacccaccacaacg
accacgtctcctaatgagtacgacgaggacaacggtcaaggccttgcacgcaaaactaaa
cgtggcgggagacaggaagtggcgaatgaagagggtggaaatgtagagacggaggaaatc
aacactctgctctcagctgatgcagttttaaaacaagtccaggaatcgaccgaaagctct
ttttcttgcagccatggtttgcaagagatctttgaccgctggcccagtatgtccgaccag
cctttgccaaacaccacagcggcctcgggagcctgcgaaaacgctgcaaatacgccacgc
gttcccgatcgacctccctccttgacgcagggcgtccgagatggggcaaagcgggacgcg
cgggccgcggggagcggttctccagaggcggaatccgaccccaagagcgcagcggagaga
ccgggctctgccggagatctcattcccccgacgcaggaaacggcgcccgtcaccccccgg
gtgaaactcaccacctcatccgtccgctcgcctctcgtcgctcaacccatcgaccggtcg
gcctcctcgaccctgcggccgcggaaaccggccatcgcaaagcgtcccgggtccctcaca
ggacacggcgaccctccgtcggaagccatcgctcgcacaaagcggcccgactccacgtcg
gatcccgaccgccggcgccgcccgcgccacagcccgtctcccgcctccccccagccgaag
cctcctcctcctcctcctgctgcggagtcgcccgaggcggcgggggcatctgctctccag
cagccccaggatgcgtcactcactcccagctgctccgggtcgttttccatcgtggacgtg
gcgagcgaccggcgcctctttgacgctttcgttaaggagtggaagacaaaggagcgctac
tccctggctttggcctgtgagaggagggagcacgggcagaagccggaggagcaaataggg
aaacccaagagagcgtcagcagctcaaccaaagctccacagcggcgacggcttcccggta
agaggccgtgacgggctggtgttgatcggactcgccgtctgctggggagcaagagacgcg
tactacgtctccctgcagcaagagcagagcaaagggctgagctccagtctggccccgccc
ccgctggaccacaacctgaccgtaggcgagcggctgcgtcgggcgaagacctgtctgacg
gcgccggcagccgctcacggggcgagcgtggtcgtggcgtatgacatcatcgaggtgtac
aagtcgcttgtgttgagctgcggcgtgagcttagggggcagcagcgaggatcccaaggtg
gcgtgctggctgctggaccccggcagcgaggagaggacgctacccaacatggtgaccgtc
tactgtcccgcagagttgcctctgctggacggccttgggaacgcacacgcgcactgcccc
cgcgtcagggcggcgaccgagagcgtgcttgcgctctctgtcatgaaccacctcgcgggc
ctgctggagaaggacggcatgctaggtgtattcagaagcgtggagatgccctcccaggtg
tctctggcggtgttggagttgaacggaatgggcttcagcgtccaggagtcggaaaggcaa
aaacacgtgatgcaagccaaactggcggcgctggagtcccaggcgtacgacctggccggg
cacagcttctccctcaccagcgtcgacgacgtggcacaggtgttgttcttcgatctacac
ctgcctcccaacggggacgtgggcggaccaaagagcaagaagactctgggttacaccagg
agaggagtgggggggcgggtacgactcggcaagcagttcagcaccaccaaggatgttctg
gagaagctccgccccctgcacccactgccgggcgtcattctggagtggaggcggatcacc
aacgccttgaccaaagtggtgttccccctgcagagggagaagcggtaccacaccggactg
gccatggacagaatacaccctattgcccagacgcacacagccacaggtagagtcagcttc
acggagcccaacgtgcagaatgtccccaaagactttgagattcacatggcgaccgtggtg
ggggagagcccgccgtcacagggcggctgtcacgtgacctccagatccggaaggaagaga
cgttcggtggtgccccgagctgcagctggctgcgcgatacaaggcccggccttctccgtc
agcatgagacacgccttcgtacctttttcaggcgggatgatcttggcagcggactattcc
cagctggagctgcgggtgttggctcacctctccaaggatcagcgtctcctgcaggtgctg
aacgggggagccgacgtgttccgctgcatcgccgcggagtggaaaagcgtcgacccggag
tctgtgcaggacgacctcaggcaacaggcgaagcagatctgctatggcattatctacggg
atgggcgccaagtctttgggggagcagatgggcgtggaggaggacgacgccgcctgctac
atagagagcttcaaggcccgatacaaagggatcaacgcttttcttcgagaaaccgcgaag
aactgcgcaaagagcggctacgtccaaaccctgatgggccgcaggagatacctgccgggc
atcacggacgccaacgcgcacgccaaagcgcacgcagagcggcaggcggtgaacaccacg
gtgcagggctcggcggcggacatcgtcaaactcgccacggtgaacatccagaagcggctg
cgagaggcgtaccccgcggcgccgctctctcaccagcacgcgcggccgggtgaatcccac
tcgcccgcccggccccctggtcgccgcggggtcggggcgtcccggctcagaggggcctac
tttgtcctgcagctgcacgacgagctcatctatgaaaccacggaggaagacctcatccag
gtggctcagatagtgaagagggagatggagtcggcagtgaagctgtatgtgaagctgaag
gccaaagtcaaggcgggacccagctggggaaacctggaggacctggatatatga

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