Gasterosteus aculeatus (three-spined stickleback): 120827606
Help
Entry
120827606 CDS
T07457
Symbol
grin2aa
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04020
Calcium signaling pathway
gat04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120827606 (grin2aa)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120827606 (grin2aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120827606 (grin2aa)
Ion channels [BR:
gat04040
]
Ligand-gated channels
Glutamate (ionotropic)
120827606 (grin2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
120827606
NCBI-ProteinID:
XP_040046579
LinkDB
All DBs
Position
XI:complement(15863349..15880652)
Genome browser
AA seq
1148 aa
AA seq
DB search
MGKLDNRSLTLKYPVWPRFNSDGDAEMDDNHLSIVTLEEKPFVIVEDVERLTGTCMRNSV
PCRKHIKDNTTEAGGTYIKKCCKGFCIDILKKIAKYVKFTYDLYLVTNGKHGKKINNVWN
GMVGEVVYKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFS
ASVWVMMFVMLLLVTAMAVFMFEYISPLGFNRNLAQGRDPHGPSFTMGKAVWLLWGLVFN
NSVPVQNPKGTTSKFIVSVWAFFAVIFLASYTANLAAFMIQEEFVDQVTGLSDNKFQNPY
AYSPPFRFGTVPNGSTERNIRKNYPAMHQYMVKYHQTGVTDALVSLKTGKLDAFIYDAAV
LNYAAGRDEGCKLVTIGSGYIFATTGYGIALQKGSYWKRQVDLAILAIIGDGEMEELEAQ
WLTGICHNEKNEVMSSQLDVDNMAGVFYMLATAMGLSLITFVSEHLFYWRLRYCFTGVCT
GTPGLLFSISRGIWSCIHGVHIDMKKKSDLDFSPQDKMLKLIKSAKQMTNMSTLGGSHMN
SPKREFMHSAGPMIMDMMAEKGNFIYADNRSYAPKDMIYGDTGDLQSYLANRHKDHLNNY
IFQGGQHPLTLNDANPNTVEVAVSAEAVQTNAKPPRTLWKKSVDTLRSAPPGPPPMPDML
MPDPRMSMKTQRYLPEDAAHSDISDCSSRAASYKDPENNKHLKPKDNLKKRSVPTKYPRD
CSDVELSYLKTKQVIGGTNQSGRGGGGEKIFTIDSDRELSLHSDPAHYRESRGLAADDLD
YPEIYSDHSDNYRKCEQPIIHLNSSPLHHPDSDLLPDPTYSKHYSLKEKNIAMSPHESME
RYKQTHCRSCLSKVSASYPPGGAYTPAVPAAASATRSPYNRCEACLHTANLYDISEDQLL
ADTLVSPTMHHQQHQQQHQPDEMFGLYWPQTDGPHVQKRNRLRLSRQHSFDNIMVEKPKE
MDLGRPARSVSLKEKDRFLDSASDSHYANLFGMRPYSGRLFGTGSKSMLFNHNLEESKRS
KSLYPTHGSDNPFLGHSLRDDTSSRLVHGRSSSDIYRQLAVASPAPAVGAPPVKTRNDAN
NLRSSVKSTTSYCSRDGRIANDMYNTEHVMPYSANKTSAYPAPRGVLNSAQFSNRRVYKK
IPSLESDV
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaactggacaaccgcagcctgaccctgaagtacccggtgtggccgcgcttcaac
tccgacggcgacgccgagatggacgacaaccacctgtccatcgtcacgctggaggagaag
ccctttgtcatcgtggaggacgtggagaggctcacgggcacctgcatgaggaactcggtg
ccctgcaggaagcacatcaaagacaacacgactgaggctggtgggacgtacatcaagaag
tgctgcaaaggcttctgcatcgacattctgaagaagattgccaagtatgtaaagttcacc
tatgacctgtacctggtaaccaatggcaagcatggcaagaagatcaacaatgtctggaat
gggatggtgggagaggtggtctataagaaagccgtcatggccgtcggatctctgacgatc
aatgaggagcgttctgaggtcatcgatttctccgtcccgttcgtggaaaccgggatcagc
gtcatggtgtcccgtagcaatggaacggtgtccccgtcagccttcctcgagccattcagt
gcgtcagtatgggtgatgatgtttgtgatgctcctactggtcactgcaatggctgtcttc
atgtttgagtacatcagtcctcttggcttcaacagaaacctggcacaaggacgagacccc
catggcccgtccttcaccatgggcaaggccgtctggctgctgtggggtctggtcttcaac
aactctgtgccagtgcagaaccccaaagggaccaccagcaagttcatcgtgtccgtgtgg
gccttcttcgccgtcatcttcctggcctcctacaccgccaacctggccgccttcatgatc
caggaggagtttgtcgaccaggtcaccgggctctccgacaacaagtttcagaacccgtac
gcatactcgcccccgttccgcttcgggacggttccaaacgggtccacggagaggaacatc
aggaagaactaccccgctatgcaccagtacatggtaaaatatcaccaaaccggagtcacc
gacgcgcttgtcagcctcaaaacggggaagctggacgccttcatctacgacgccgcggtg
ttgaattacgccgccggcagggacgagggatgtaagctggtgaccattggcagcgggtac
atcttcgccaccaccgggtacggcatcgctctgcagaagggctcgtactggaagcgacag
gtggacctggccatcctggccatcatcggggacggcgaaatggaggaactcgaagcccag
tggctgacgggaatctgccacaacgagaagaacgaggtgatgtccagtcagctggatgtg
gacaacatggccggtgtcttctacatgctggccacggccatggggctgtccctcatcacc
tttgtctccgagcacctcttctactggaggctcagatactgcttcactggggtctgcacc
ggcacgccgggcctcctgttctccattagtcggggtatctggagttgcatccacggagtc
cacattgacatgaagaagaagtcagatttggactttagcccgcaggacaaaatgctgaag
ctcattaaatcagccaaacagatgacaaacatgtcaaccctgggtggctcccacatgaat
tcacccaaacgtgaattcatgcactcggctggtcccatgattatggacatgatggcagag
aagggaaacttcatctatgctgacaaccgaagctacgctcccaaagacatgatctatggg
gacactggcgacctgcagtcttatctggccaaccgccacaaagaccacctgaacaactac
atcttccaaggaggccagcatcccctgaccctaaatgacgccaatcccaacacagtcgag
gtggcagtaagcgcagaggcggtccaaaccaacgccaagccgccccggaccctgtggaag
aagtcggtggacacgcttcgttcggcgcctcccgggccccctccgatgcccgacatgctg
atgccggaccccaggatgtcgatgaagacgcagcgctacctccccgaggacgcggcccac
tccgacatctccgactgttccagcagggcggcctcctacaaggaccctgaaaataacaag
cacctgaaacccaaggacaacttaaaaaaaagatccgttccgacaaaatacccaagggac
tgcagtgatgtagagctgtcctacttaaagactaagcaggtcatcggcggaaccaaccag
agcgggagaggaggaggaggagagaagatattcaccatcgactctgaccgggagctgagc
ctgcactcagaccccgcccactaccgcgagagccgcggcctggccgcagacgatttggat
tatcccgagatctactccgaccacagtgacaactaccggaagtgcgagcagcccatcatt
cacctgaactcctcgcctctgcaccaccccgactccgacctcctgccggacccgacttac
tccaaacactacagcctgaaagagaaaaacattgccatgtccccgcacgaatccatggag
cgctacaaacagacacactgccgctcttgcttgtccaaagtgtccgccagctacccgccg
gggggggcgtacacgcccgccgtacccgccgcagcgtctgccacgcgctcaccctacaac
cggtgcgaagcgtgcctccacacggcaaacctgtatgacattagtgaggaccagctgctc
gcagacaccttggtcagccccaccatgcaccaccaacagcaccaacagcagcaccaaccg
gacgagatgtttggcctgtattggccacagacggacgggccgcacgtgcagaaaagaaac
cgcctgaggctgagccgtcagcactccttcgacaacatcatggtagagaagcccaaggaa
atggacctggggcgaccggcgcgcagcgtcagcctcaaggagaaggatcgcttcttggac
tccgcatccgactcgcactacgcaaacctcttcggcatgcgcccctactccggcagactg
tttggcaccgggtccaaatcgatgctgttcaaccacaacctggaggagagcaagaggagc
aagtccctgtacccgacccatggctcggataaccctttcctcggccactcgctgagggac
gacaccagcagcagactggtccacgggcgcagctcctctgatatttacagacagctggcg
gtggcctcgcccgcaccggccgtcggagcgccccccgtcaaaacacgcaacgacgcgaac
aatctccgctcctccgtgaaatccaccacgtcatactgctcacgagacggtcggatagcc
aatgacatgtacaatacagagcatgtgatgccttactcagccaataagactagtgcatac
ccggccccccgtggcgtcctaaactccgcccagttcagcaacagacgggtgtataaaaaa
atccccagtctggagtcagatgtttag
DBGET
integrated database retrieval system
