Gasterosteus aculeatus (three-spined stickleback): 120828881
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Entry
120828881 CDS
T07457
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2 isoform X1
KO
K06243
laminin, beta 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04510
Focal adhesion
gat04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120828881 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120828881 (lamb2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Laminin_II
F5_F8_type_C
TPR_MLP1_2
EzrA
Motif
Other DBs
NCBI-GeneID:
120828881
NCBI-ProteinID:
XP_040048479
LinkDB
All DBs
Position
XII:17316070..17352528
Genome browser
AA seq
1797 aa
AA seq
DB search
MHAPLLTLFCVLATAVGQEPDHSHGCAQGSCYPATGDLLVGREKNLKASSTCGMRRKEPY
CIVSHLQDEKKCFDCDSRRPYDPVYNTINHRVENVITTFKPHRKKSWWQSENGKSDVFVQ
LDLEAEFHFTHLIMTFKTFRPAAMLIERSADFGRTWQIYRYFSHDCTAAFPGVPQGPSRN
INDVLCESRYSDIEPSTGGEVIYRVLDPSIRIEDPYSPSIQNQLKITNLRVNFTKLHTLG
DNLLDPRDEIKEKYYYAMYELVVRGNCFCYGHASECAPIVGIRDDIEGMVHGRCVCNHNT
KGLNCERCDDFHNDLPWRPAEGRSTNACKKCNCNGHSSQCHFDMAVYLATGNLSGGVCDD
CQHNTMGRNCETCKLFYYKDPVKDTRDPQVCIACDCDPDGSQNGGMCDSHTEPSLGLVGG
QCRCKANVEGPRCDKCKTGFFGLSPHNPQGCQPCQCDHRGTVSGSSQCDPVSGDCFCKRL
VTGRSCDQCLPEHWALSHDLNGCRGCECDVGGALDNHCSMQSGQCRCRSHMTGRQCTQVE
SRYFFMALDHFLYEAESAKMGQGCTPETREHQPGRPATWTGSGFARVPEGGTLEFLIADI
PYSMEYELLIRYETQMPRDWEDVQITVIRPGPIPTSSPCGNTIPDDDRLTVSLPAAARFV
VPAPAVCLERGVTYTLRFEFKRYQDANSILHGAAEALLLMDSIALMPRHTSMEMFNAGDT
ASSSRKQAYERYRCREGAKSVTRPMMTDTCAKLILSMSAIINDGALACNCDPQGSVSSMC
DVRGGQCACKPNVIGRRCDQCAPGTYGFGPSGCIACSCSLEGAVTRLCDKFSGQCQCRPG
AFGQRCDGCQAGHWGFPSCRPCRCNGHADQCDQRTGACVSCRDNTGGDKCDRCANGYYGN
PVLGKASSAQCRPCPCPEGPNSGRHFAASCYQDNRDRQIICNCNQGYTGIVKRSGVTVFK
RARCEECAPGYYGNPSRPGGRCQPCQCNNNIDMSDMEACDRQTGQCRKCLYNTEGPDCGI
CKSSYFGDASRRNCRKCTCNFLGTDRGQCMEREDCVCQRASGQCQCQPNVIGLPCDHCAP
NHWNLASGRGCEPCGCDPHNSVTAACNEFTGKCQCRDGFGGKTCTDCQENYWGDPRTQCR
ACDCDWRGIETSQCNRVTGHCVCQQGVSGVRCDQCARGFSGHFPNCQPCHKCFGDWDRIV
QDLAVRTKTLAERAHEIQTTGLTGVYEKAFRDLEEKLAQARGIVNARNATAVAVTTLMEL
IEDLRAQIGETTDALSRLEGDLTIVQDGNSEASKELSALEREAKELNLTLKQLHRQLDIL
KNSNFLGAYDSIRSSHNKSRDAERRANESTTTRPSTVSQSADTRHRTERLIAAKKDDFNR
KNAANKRALGDLNTRAQGLDLKKINEKVCGAPGDAPCGESPCGGAGCRDDEGNRHCGGLN
CNGAVAVANNAMERAKHAEKELNKAMGEVEGLFSKVADAKTKAEEAKGKAQAALDKATAT
KNKVERSNNDLRDLIKQIRDFLTQEGADPDSIEAVANRVLELSIPASPLQIRHLADEIKE
RVHSLSNVDAILQQTQDDVRRAERLLLDAKRARHSAEGVKTTAETVKQALVDAQTAQASA
EKAIARAKADIGETQTRLTQIESETSNSEKDLDDAMERLATLGREVSALKTKRANNSMAA
ARAEETATMARDKANEAKQILDGQLTDKYHEVQQRVDTKAKVVQDAKKRAEHLRHEAKEL
LRDAQNKLQRLAELEKNYEDNQKKLEGKARQLDGLEDQMKAILSGINKQIQIYNTCQ
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcgccgctactgacgctcttctgcgtcctggctaccgccgttggccaggagccc
gaccacagccacggctgtgcccagggcagctgttacccagcaacgggggacttgctggtc
ggccgggagaagaacctgaaggcctcgtccacatgcgggatgaggagaaaagagccgtac
tgcattgtcagtcacctgcaggatgagaagaagtgtttcgactgtgactccaggcggccg
tacgacccggtgtacaacaccatcaaccaccgggtagagaacgtcatcaccacctttaaa
ccccaccgcaagaagtcctggtggcagtcggagaatggaaagtcggacgtcttcgtccag
ctggatctggaagcagagtttcatttcactcacctgatcatgaccttcaagaccttccgt
ccggcggccatgttgatcgagcgctccgcagactttggtcgcacctggcagatctaccgc
tacttttcccacgactgcaccgccgccttccccggagtcccccagggtccttcgcgtaac
atcaacgacgtcctctgtgagtcgcgctactccgacatcgagccgtccacggggggagag
gtcatctacagagtgttggatccatccatcaggatcgaggatccatacagcccgagcatc
cagaaccagctaaagatcactaacttgagagtgaacttcaccaagctgcacacgctggga
gacaacctgctggaccccagagatgaaatcaaggaaaagtactactacgccatgtacgag
ctcgtggtacgcgggaactgcttctgctacggccacgcctcggagtgcgcgcccatcgtc
ggcatccgggacgacatagaaggaatggtccacggcaggtgcgtctgcaaccacaacacc
aaaggtttaaactgcgagcgctgtgacgacttccataacgacctgccctggaggccggcc
gagggtcgcagcaccaacgcctgcaagaagtgtaactgtaacggccactcgtcccagtgc
cactttgacatggcggtgtatttggccacgggcaacctcagcggaggggtgtgtgacgac
tgtcagcacaacaccatgggacgcaactgcgagacgtgcaaactcttttactacaaagac
cccgtcaaggacaccagggacccccaggtctgcatcgcttgtgactgcgacccagacggc
tctcagaacggcggcatgtgcgacagccacacggagccttccctcggcctggtggggggt
cagtgccgctgcaaagccaacgtggaggggccgcgctgcgacaagtgtaagaccggcttc
ttcgggctgagcccccacaaccctcagggctgccaaccctgccagtgtgaccacaggggg
acagtgtccggcagctcccagtgtgacccggtcagtggagactgcttctgcaagcggctg
gtcacaggacgcagctgtgaccagtgtttgccggagcactgggccctgagccacgacctc
aacggctgccgaggctgcgagtgtgatgtcggaggagctctggacaaccactgctccatg
cagagcggtcagtgtcgctgccgcagtcacatgaccggacgccagtgcacgcaggtggag
tccagatatttcttcatggccctggatcacttcctgtatgaggctgagtcggccaaaatg
gggcagggctgtacacccgagaccagggagcaccagccgggtcgccccgctacgtggacg
ggcagtggatttgcccgggtacctgagggcggcaccctggagttcctcatcgctgacatc
ccctactccatggagtacgagctgcttatccgctatgagactcagatgccacgagactgg
gaggatgtgcaaataacagtgatccgtccggggccgattccaaccagcagcccgtgtgga
aacaccattccagatgacgaccgactcaccgtctccctgccggctgcagccaggtttgtg
gtccctgctccggctgtgtgtctggagagaggtgtgacttacaccctccgctttgagttt
aaacgctaccaggatgccaacagtatcctccacggagcggccgaggcactcctcctcatg
gactctattgccctgatgccgcgccacacctccatggagatgttcaacgcaggcgataca
gcctccagcagcaggaagcaggcctatgagcggtaccgctgccgcgagggggcgaagagt
gtgacacgccccatgatgactgacacctgtgccaagctcatcctcagcatgtcggccatc
attaatgacggggctctagcttgtaattgcgatcctcaggggtccgtcagctccatgtgt
gacgtccgggggggccaatgtgcctgcaagcccaacgtgataggtcgacgctgtgaccag
tgcgctccaggaacttacggctttggaccctcaggctgcatagcctgcagttgcagcctg
gaaggcgctgtgactcgactctgcgacaagtttagcggtcagtgccagtgccggcccgga
gcgtttggccagcgctgcgacggatgccaggcaggtcactggggcttccccagctgccga
ccctgccggtgtaacggacacgccgaccagtgcgaccagcggaccggagcctgcgtcagc
tgcagggacaacaccggaggagacaagtgtgacaggtgtgccaatggttactatggtaac
cccgttttgggcaaagcatccagtgctcagtgtcgcccgtgcccttgtcctgaaggcccc
aacagcggacgccactttgctgcgtcttgttaccaggacaaccgtgacagacaaattatc
tgcaactgtaaccagggctacacggggattgttaaacgctccggggtgaccgtttttaag
cgagcccgatgtgaggaatgtgctccgggttactatggcaacccctctcggcccggaggc
cgctgccagccgtgccagtgcaacaacaacatagacatgtccgacatggaggcctgcgac
aggcagaccggacagtgccggaaatgcctgtacaacaccgagggccccgactgtggcatc
tgcaagagcagctatttcggcgacgcctcccgtcgcaactgcaggaagtgcacgtgtaac
ttcctggggaccgaccgcggccagtgcatggagcgagaggactgtgtgtgtcagcgggcg
tccggccagtgccagtgtcagcccaacgtcatcggcctgccatgtgaccactgcgccccc
aaccactggaacctggccagcgggaggggctgtgagccctgcggctgtgacccccacaac
tctgtcaccgcggcgtgcaatgagttcacggggaagtgtcagtgtcgcgacggcttcggc
gggaagacctgcacagactgtcaggagaactactggggagaccccaggactcagtgcaga
gcttgcgactgcgactggcgaggcatcgagacctcgcagtgcaaccgggtgaccggccac
tgtgtttgccaacagggggtgtccggtgtgcgctgtgaccagtgtgccagaggcttctct
ggccacttccccaactgtcagccctgtcacaagtgcttcggggactgggatcgcattgtg
caggacctggcagtacgcaccaagactctggcagagcgggcccatgagattcagaccact
gggctcactggggtctatgagaaggccttcagggacctggaggagaaactggcacaggct
cggggaatcgtcaatgcccgcaacgccactgccgtagctgtcactaccctaatggagctt
attgaagatctgagagcgcagatcggggagaccactgacgccctgagccgtctggaagga
gacctgaccatcgtccaggacggcaactcagaggcgagcaaggagctgagtgctctggag
agagaagctaaagagctcaacctcacgttaaagcagctacaccgccaactagatatccta
aaaaactccaacttcctcggtgcgtacgacagcatccgtagctcccacaacaagtctcgt
gatgcggagcgccgtgccaatgaatcaaccaccaccaggcccagcacggtcagccaatca
gcagacactcgccaccgcaccgagcgcctcatcgccgccaagaaggacgacttcaaccgc
aaaaatgcagcgaacaagcgcgctctcggagacctcaacacccgagcgcagggcctggac
ttgaagaagatcaacgagaaggtttgcggcgcgccaggtgatgctccctgtggggaaagt
ccttgcgggggggcaggttgccgtgacgatgaagggaaccgccactgtggaggcctaaac
tgtaacggcgctgtagctgtagctaacaacgccatggagagagccaaacacgcagagaag
gagctcaacaaagctatgggagaggtagagggactcttttccaaggtggcagatgccaag
acgaaggccgaggaggcgaaaggtaaagcccaagcagctctggacaaagccacggccacc
aagaacaaagtggagcgctccaacaatgacctgagagacctcatcaaacagatccgagac
ttcctcacccaggaaggtgcggacccggacagcattgaggcggtggcgaaccgcgtgttg
gagctctccatccccgcctcgccgctccagatcaggcatctcgccgacgaaatcaaggag
cgcgttcacagcctctccaatgtggacgccatcttgcagcagacgcaggatgacgtccgc
agggcggagcgactgctgctggatgccaagagggcaaggcacagtgctgagggggtgaag
accacagcggagacggtgaaacaggccctggtggatgctcagactgcccaggcatccgca
gagaaggccatagccagagccaaggccgacattggggagactcaaacccgactgacacag
attgagtcggaaacgtccaacagcgagaaagacctggacgacgccatggagcgcctggcc
acactgggacgggaagtcagcgccctgaagaccaaacgagccaacaacagcatggcagca
gcccgggccgaggagacggccaccatggcacgagacaaggccaacgaagccaagcagatt
ctagatggccaactgacggataaataccacgaggtgcagcagcgggtcgacaccaaggcc
aaagttgtgcaggacgccaagaagagagcggagcacctcagacatgaagcaaaggaacta
ctgagagatgctcagaacaagctccagaggctagcagagctggagaaaaactacgaggac
aaccagaagaagttggaggggaaagctcgccagctggacggcctggaggaccagatgaaa
gccatcctcagcggcatcaacaaacagatccagatctacaacacatgccagtaa
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