Gasterosteus aculeatus (three-spined stickleback): 120829318
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Entry
120829318 CDS
T07457
Symbol
si:dkey-72l14.3
Name
(RefSeq) glyco_hydro_56 domain-containing protein isoform X1
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat00531
Glycosaminoglycan degradation
gat01100
Metabolic pathways
gat04142
Lysosome
Module
gat_M00076
Dermatan sulfate degradation
gat_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
120829318 (si:dkey-72l14.3)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120829318 (si:dkey-72l14.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
gat02042
]
120829318 (si:dkey-72l14.3)
00536 Glycosaminoglycan binding proteins [BR:
gat00536
]
120829318 (si:dkey-72l14.3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gat00537
]
120829318 (si:dkey-72l14.3)
Enzymes [BR:
gat01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
120829318 (si:dkey-72l14.3)
Bacterial toxins [BR:
gat02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
120829318 (si:dkey-72l14.3)
Glycosaminoglycan binding proteins [BR:
gat00536
]
Heparan sulfate / Heparin
Enzymes
120829318 (si:dkey-72l14.3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gat00537
]
Enzymes
120829318 (si:dkey-72l14.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
MycE_N
Motif
Other DBs
NCBI-GeneID:
120829318
NCBI-ProteinID:
XP_040049271
LinkDB
All DBs
Position
XII:14067919..14077941
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AA seq
568 aa
AA seq
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MAWTEPRSRPDPELDPKPAPRSLKTQNTFPSAILPVQPPVLLPFLLLLAAFADLGTAGPP
QPAWPPLLSGQPFIIFWGIRDSSCSGRPDPRSFGMEREGRVAVFYEDTLGNYPYFLDKDT
PVNRGLPQHTRMQDHLQKTQQDVEAALPAPRYLGLGVLRWAEWVPQWSRNRERQAIYLDE
SRDLMKTFFPGWTPEEVEKWSKVDFEAAAQSVMMETLREVKRLRPKALWGVSPYPSCYNG
DPALTSLANYTGQCPAAEMALNDELLWLWKRCSALYPLLTLEKLQCGTSGGRLHLASEIR
EAVRVSSLSGTGSDLPVFPIVRSVYASTNTFLSQADLVSTIGESAAMGTAGVVIWGKSET
KTERECQDLAEFVRKVLGPYSINVTTATRLCSASLCQGKGRCVRQNPESAVYLHLPLPSE
PVEKVTEKVTEKVTEKVTEKEETEKATDQPETNTKPSEPDPAEIWKKDFQCQWYETADGD
VSDQQSPKDGASAGGAAKANPGDVLGNAAASTAKGASAIELRGSSSPGAGSPTPPQEVAA
GGGTESPSVPMVTVLLLLLAAGRLCSEP
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcttggaccgagccacggtcccgtccagaccccgagctcgacccaaaaccagcgcct
cgcagtctaaagactcagaacacttttccatcagcgatccttccagtccagcctccagtt
ttactgcccttccttcttctgctcgctgccttcgctgacctgggtactgccggtccaccg
cagccagcgtggccccctctcctgtccggacagcctttcatcatcttctggggcatccgt
gactcctcctgctccggacggccagatcccaggtcctttgggatggaacgggagggccgc
gtggccgtcttttacgaggacacgttggggaactacccttatttcctagacaaagacacg
ccggtcaatagggggctaccacagcacacacggatgcaagaccacctccagaagacacag
caggacgtggaggcggctttacccgccccgaggtaccttgggctgggggtgcttcgctgg
gccgagtgggtcccgcagtggtcaagaaaccgagagaggcaggcgatctatctggacgaa
tcgagagacctgatgaagacattctttcctgggtggacgccagaggaggtggaaaagtgg
tcaaaggtggactttgaggcagcagcccagtcagtaatgatggaaactctccgggaggtc
aaaaggttaaggcccaaagcattatggggcgtctccccttaccccagctgctacaacggc
gatcccgccctcacatcgttggccaattacacgggccagtgccctgctgcagagatggcc
ctcaacgacgagctcctgtggctgtggaaacgatgctccgccctctaccctcttctcacc
ctggagaagctacagtgtggaacctctggaggcaggcttcacctggccagcgaaatccga
gaggcagtgcgagtatcgtctctgagtggcactgggtcggatcttcctgtattcccaatc
gtcaggagtgtttatgcatcaacaaacactttcctgtcacaggcagacctggtgagcacc
atcggagagagtgctgccatgggaacagctggagttgtcatctgggggaagagtgagact
aaaacagagagagagtgtcaagacctggcagagtttgtccgcaaggtcctgggaccctac
tccatcaacgtaaccacggcaacccgactgtgctcagcctccctctgccaaggaaagggc
cgatgcgtccgtcagaatccagagagcgccgtctacctccacctcccactaccgtccgaa
ccggtggaaaaggtgacggaaaaagtgacggaaaaagtgacggaaaaggtgacggaaaaa
gaagagacggaaaaagccacagatcagcccgaaacaaacaccaaaccatccgaacccgac
ccggctgagatctggaagaaggacttccaatgccagtggtacgagacggcagacggggac
gtctcggaccagcagtcccccaaagacggggcgtctgctgggggcgctgcgaaagcaaat
cctggagacgttttgggcaacgcagcagcttcgactgcaaagggtgcctctgcgattgag
ttgagaggaagcagctcgccaggagccggaagcccgacgcctccacaggaagtggctgca
ggcggcgggacagagtccccaagcgtcccgatggtcaccgttctgctgctgctgctggcg
gctggacgtctttgctcggaaccttaa
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