Gasterosteus aculeatus (three-spined stickleback): 120831288
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Entry
120831288 CDS
T07457
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03022
Basal transcription factors
gat03420
Nucleotide excision repair
gat04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120831288 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
120831288 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120831288 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gat01001
]
120831288 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120831288 (cdk7)
03019 Messenger RNA biogenesis [BR:
gat03019
]
120831288 (cdk7)
03400 DNA repair and recombination proteins [BR:
gat03400
]
120831288 (cdk7)
Enzymes [BR:
gat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
120831288 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
120831288 (cdk7)
Protein kinases [BR:
gat01001
]
Serine/threonine kinases: CMGC group
CDK family
120831288 (cdk7)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120831288 (cdk7)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
120831288 (cdk7)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120831288 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
120831288
NCBI-ProteinID:
XP_040052590
LinkDB
All DBs
Position
XIII:9603931..9608697
Genome browser
AA seq
343 aa
AA seq
DB search
MALEAKSRNKRYEKLDFLGEGQFATVYKARDKTNDTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELHHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTPSNIKAYILM
TLQGLEYMHQHWVLHRDLKPNNLLLDGSGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRIPFLAGDSDLDQLTKIFEALGTPTEETWPGM
SSLPDYVSFKIFPGTPLEHIFTAAGDDLLELLQSLFTFNPLTRTTATQALKMRYFSNRPG
PTLGPQLPRPNCSAEALREKETIGLKRTIEGLETTVMKKKLIF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcgaagcaaaatcaagaaacaaacgatacgagaaactggatttcctcggagag
ggtcagttcgccacggtgtacaaagccagggacaaaaccaatgacaccatagttgccatt
aaaaagattaaggttggccacaggactgaggctaaagatggtattaacaggactgctctc
cgagagatcaaactactgcaggagctgcatcatccaaatatcatcgggctcctcgatgcc
tttggacacaaatctaacatcagcctggtgtttgatttcatggaaacggacctggaggtg
atcatcaaagacaccagcctagttctgactccatccaacatcaaagcctacatcctaatg
accctgcagggattggagtatatgcaccaacactgggtcctgcacagggatctgaagccc
aacaatctgctgttagatggcagcggagtgttgaagttggctgattttggtctggccaaa
gcatttggcagccccaacagagtctacacacatcaagttgttaccaggtggtaccgctcc
cctgagctcctgtttggtgccaggatgtacggtgtgggtgtcgacatgtgggcggtggga
tgcatcttggccgagttactccttcggataccattcctcgctggagactctgatcttgac
cagctgacgaagatctttgaggctctcgggacgcctacagaagagacgtggccgggaatg
agtagtctaccggattatgtgtccttcaaaatatttcctggcacaccgctggaacatata
tttactgcagctggagacgacttgctagagctgctgcagagcctgttcacctttaacccc
ttgacgaggaccacagcgacacaagctctgaagatgcggtacttcagtaatcgacccggt
cccactcttggcccacaactcccccgacccaactgttcagccgaggccctgagggagaag
gaaacgatcgggctcaagaggacaatcgagggcctggagacaactgttatgaagaagaag
ctcatcttctga
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