Gasterosteus aculeatus (three-spined stickleback): 120831925
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Entry
120831925 CDS
T07457
Symbol
notch1a
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120831925 (notch1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
Ank
Notch
EGF_2
NOD
NODP
Ank_4
Ank_5
Ank_3
EGF_3
JAG1-like_EGF2
DL-JAG_EGF-like
cEGF
Motif
Other DBs
NCBI-GeneID:
120831925
NCBI-ProteinID:
XP_040053781
LinkDB
All DBs
Position
XIV:complement(3492164..3507205)
Genome browser
AA seq
2445 aa
AA seq
DB search
NNPCFLINTTLIPRCPSDYVGNRCQYPSPCSPSPCRNGGDCRAVSHGNTFDFRCVCRLGF
TDRLCLTPTNHACMSSPCRNGGTCNLITTSAFHCRCPPGWSGKTCQLANPCASNPCANGG
QCSAFDSAYICTCPPAFHGQTCKQDVNECAQNPSPCLNGGVCVNEVGSYSCRCPQEYTGR
HCETTYMPCSPSPCLNGGTCVQKGDTIYDCSCLPGFTGHHCEYNIDDCPGHTCQNGAVCV
DGVNTYNCRCPPHYTGQYCTENVDECELMPNACQNGGTCHDTHGSYHCVCVNGWTGDDCS
DNIDDCASAACYSGATCHDRVASFFCECPHGRTGLLCHLDDACISNPCQKGSNCDTNPVN
GKAICTCPPGYTGSACNLDIDECSLGANPCEHGGRCINTKGSFQCKCLQGYEGPRCEMDV
NECMSNPCHNDATCLDQIGGFHCICMPGYEGVFCHINTDECASQPCLNNGKCIDKINSFH
CECPKGFSGSLCQVDIDECASTPCKNGAKCTDGPNKYTCECAEGYSGQHCETDINECYSD
PCHYGTCKDGLASFTCYCRPGYTGRLCETNINECLSQPCKNGGTCQDRENTYICACPKGT
AGFNCEVNLDDCKSRPCDYGRCIDKINGYECACEPGYTGTMCNINIDDCANNPCHNGGTC
VDGNNRFTCLCPEGYNDATCLSQVDECGSNPCIHGRCQDLINGYKCTCDSGWSGLNCDIN
NNECESNPCMNGGTCKDMTSGYHCTCRAGFTGPNCQTNINECASNPCLNQGTCIDDVAGY
KCNCLLPYTGENCEILLAPCSPRPCKNGGVCKEAEDYQSFSCICPEGWQGQTCEIDINEC
VKSPCRNGAVCHNTMGGYQCKCQPGYTGQKCETDTDDCKPNPCSNGGLCRDAINTFTCTC
LPGFRGGRCEQDINECESNPCRNGANCTDCVNSYTCTCPPGFSGINCEVNTNDCTDSSCF
NGGTCVDGINAFTCLCLPGFTGSYCQYDIDECDSKPCLNGGSCLDSYGTYLCTCPHGYIG
VNCQILVRWCDSSPCKNGGSCWQQGASYTCQCQTGWTGLYCDIPSVSCEVAAKRQGVEVA
HLCRNSGQCLDAGNTHYCRCQAGYTGSYCQEQVDECSPNPCQNGAACTDYLGGYSCECVP
GYHGVNCSKEINECQSQPCQNGGTCIDLINTYKCSCPRGTQGVHCEINLDDCTPSSDPLT
NEPKCFNNGKCVDRIGGYRCVCPAGYVGERCEGDVNECLSDPCDPQGSYNCVQLTNSYRC
ECRTGYTGQRCDKVFDGCKSRPCKNGGSCAVASNTPHGFICKCPPGFTGSSCEYDSRSCG
SLNCRNGGTCVSGHLGPRCLCPPTFTGPECQTPTDSLCISNPCYNGGTCQVTPDAPFFHC
SCPSNFNGLLCHILDYSFVGGFGRDITPPPEVEVSCEIAQCDEWAGNHICDSLCNNHACG
WDGGDCSLNFDDPWQNCSAALQCWRYFNNGKCDGQCNSPGCLYDGFDCQGQEGQCNPLYD
QYCKDHYADGHCDQGCNNAECEWDGLDCANNMPEKLADGHLVLVVHIPPEQLKNSSSTFL
RELSSVLHTNVVFRRDAKGEPMILPYYGNEQDLVKHNVLKRSAEGWPEWASMPANVLGQV
KESVSAMVSPRKRRELDPVQVKGSVVYLEIDNRQCYQQSTECFQSATDVAAFLGALATSG
NLNVPYIEAVTSVRPTPTTSELYPMYVVFLGLAALGFICLGVLVSRKRRREHGQLWFPEG
FKASEPSKKKRREPLGEDSVGLGPMKNSDINLMDDNQNEWDDQDPDCRRFRFEEQAMLDL
SDRTDHRKWTQQHLDAADLRIASIAPTPPQGEIENDCMDVNVRGPDGFTPLMIASCSGGG
LETANIEEEEDPSAEIISDFIYQGANLHNQTDRTGETALHLAARYARSDAAKRLLESSAD
ANVQDNMGRTPLHAAVAADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMVEE
LINCHADANATDDSGKSALHWAAAVNNVEAAMVLLKNGANKDMQDNKEETPVFLAAREGS
FETAKVLLEHFANREITDHLDQLPRDIAQERMHHDIVRLLDEYNVVRSPGLHSGPLSASS
LSPPLCSPNDYLSNLKPMLSVKKVRKLSSGGKGGKDGGKDNRMKKKKSLDGKGNLLDSSG
VLSPVDSLESPHGYLSDVASPPMTSPFQQSPPPMSLNHLQGNGDHMGQMSMGKDMGCMSF
DHNPPRLSHMPVSSPGTQGTTSIGGSRGGQCDWISRMHPGVGQQGGFTQGSTLSHGMMGA
LHGVSTATLSQIMGYQNLQTSHLGSSAHMMQQAHSRQLQHQNSNSTTAGQSLSQSFPSVE
LNGSDMQQNNGRSMPIHTVMPQETQILGNQFLTPPSQHSYSGPMDNTPNHQLQVPDHPFL
TPSPGSPDQWSSSSPHSNMSDWSEGISSPPTSIHSQMNLIPDQFK
NT seq
7338 nt
NT seq
+upstream
nt +downstream
nt
aacaatccttgttttctaatcaacacaactctaatccccaggtgtcccagcgactacgta
ggtaatcggtgccagtatccaagcccctgcagcccttcgccctgccgcaacggcggcgat
tgccgcgccgtttcccacggcaacacctttgatttccgctgcgtgtgccgcctgggcttc
accgaccggctatgcctgacccccaccaaccacgcctgcatgagctccccgtgccgcaac
ggaggaacatgcaatctcatcaccacctccgccttccactgccgctgcccacctggttgg
tcaggtaaaacctgtcagctcgccaacccgtgcgcgtccaacccgtgcgcgaacgggggc
cagtgctcggctttcgattccgcctacatctgcacctgcccgccagccttccacggccag
acctgcaagcaagacgtcaacgagtgcgcccagaacccctcgccctgtctcaacggcggc
gtgtgtgtgaacgaggtgggctcgtacagctgccgctgtcctcaggagtacactgggcgg
cactgcgagacgacctacatgccatgcagcccctcgccgtgcctgaacggaggcacctgc
gtgcagaaaggagacaccatctacgactgcagctgccttccaggtttcaccgggcaccac
tgtgaatataacatcgacgactgtccaggccacacctgccagaatggtgctgtgtgtgtg
gacggtgtgaacacctacaactgccgatgcccacctcattacacaggtcaatactgcaca
gaaaacgtggacgagtgcgagttgatgcccaacgcctgccagaacggaggaacgtgccac
gacacccacggcagctaccactgcgtctgcgtcaacgggtggacgggtgacgactgcagc
gacaacatcgacgactgtgccagcgcggcttgttacagcggcgctacctgccacgaccgc
gtagcctccttcttctgcgagtgtcctcacggtcgcacaggtctgctgtgccacctggat
gacgcctgcatcagcaatccttgtcaaaagggttccaactgtgacacaaacccagtcaat
ggcaaggcgatctgcacctgtcccccaggttataccgggtcagcctgcaacctggacatc
gacgagtgctccctgggtgccaacccctgtgagcacggtgggcgctgcatcaacaccaaa
ggctccttccagtgcaagtgtcttcaaggatacgaaggacctcgatgcgagatggacgtc
aatgagtgcatgtccaatccttgccataatgatgccacctgcctggatcagattggaggg
ttccactgcatctgcatgccaggatacgagggtgtgttctgccacatcaacacagatgag
tgtgccagccaaccttgtctcaacaatggcaagtgcatcgacaagatcaactccttccac
tgcgagtgccccaaaggtttttcggggagtctgtgtcaggtggacatcgacgagtgtgcc
agcactccttgcaagaacggagcgaagtgtactgacggtcccaacaagtacacctgcgaa
tgtgccgaaggttactcggggcagcactgtgagactgacatcaacgagtgctactctgac
ccatgccattatggcacctgcaaggacggcttagcctccttcacctgctactgccgacct
ggctacaccggccgcttgtgtgagaccaacatcaacgagtgcctcagtcagccctgcaag
aatggtggcacttgccaggacagggaaaacacatatatttgtgcttgccccaaaggcaca
gcgggtttcaattgcgaggtaaacctggacgactgcaagagcagaccctgcgactacggg
aggtgcatcgacaaaatcaacggctacgagtgtgcatgtgaacccggctacaccggaaca
atgtgtaacatcaacatcgacgattgcgccaacaacccctgtcacaacgggggcacgtgc
gttgatggtaataaccgatttacctgcctgtgcccagagggctacaacgacgccacttgt
ttgtctcaggtcgatgagtgcggcagcaacccctgcatccacggccggtgccaggacctc
atcaacggctacaaatgtacctgcgactctggctggagcggcctcaactgtgacatcaat
aacaacgagtgtgagtccaacccgtgcatgaacgggggaacgtgcaaggacatgaccagc
ggataccactgcacatgcagagctggtttcactggacctaactgccaaactaacatcaac
gagtgtgcctccaacccctgcctcaaccagggcacctgcatcgatgatgtggctggatac
aagtgcaactgtttgctgccctacactggtgaaaactgtgagatcctgcttgcaccctgc
agccccagaccctgtaaaaatggtggagtgtgtaaggaggctgaagactaccagagcttc
tcctgtatctgccctgaaggatggcaaggtcaaacctgtgagatcgacatcaacgaatgc
gtgaagagcccatgccgcaacggtgccgtctgccataacactatgggtggttaccagtgc
aagtgccagccaggttacactggccagaagtgtgagacagacactgatgattgcaaacca
aatccctgcagcaacggaggtctgtgccgcgatgccatcaacactttcacatgcacctgt
ctgcccggctttcgtggcggtagatgcgagcaggacataaatgagtgtgaaagtaacccc
tgtagaaacggcgccaactgcaccgattgcgtcaacagctacacgtgcacctgcccgccc
ggtttcagtggcatcaactgtgaggtcaacaccaacgactgcacagacagctcttgcttc
aatggtggcacctgcgtggatgggattaacgcgttcacctgcctgtgtctacctggattc
actggcagctactgccagtatgatatcgatgagtgtgactccaaaccgtgtctcaatgga
ggatcttgcctcgacagttatgggacatatttgtgcacatgtcctcatggctacataggg
gtcaattgccagattcttgtgcgctggtgtgattcctccccttgtaaaaacgggggttcg
tgctggcagcagggagcgtcttacacctgccaatgtcagactggatggaccggcctgtat
tgtgacatccccagtgtgtcttgtgaggttgcagccaaacggcaaggggtggaggtggct
cacctgtgcaggaactcgggccagtgtctggatgccggaaacacacattactgtcgctgc
caggccggctacaccgggagctactgccaggagcaagtggacgagtgctcaccaaatcct
tgccagaatggagccgcctgcacggactatctggggggctacagctgtgagtgtgtcccc
ggctaccacggtgtaaactgctccaaagagatcaacgaatgtcagtcacagccctgtcag
aacggaggcacgtgcatcgacctcatcaacacatacaagtgctcgtgtcccagaggaaca
caaggtgtccactgtgagatcaacttggatgactgcaccccctccagcgacccgctgacc
aatgagcccaagtgcttcaataatggcaagtgcgtggaccgcatcggcggttaccggtgc
gtgtgcccagcgggctacgtaggagagcgctgtgagggcgacgtgaacgagtgtttgtcg
gacccctgcgacccccaagggtcttacaactgtgttcagctcaccaacagctaccgctgc
gaatgccgcacgggatacacaggtcagcgttgtgacaaagtgtttgacggctgtaaatca
agaccctgcaaaaacggagggtcatgtgctgttgccagtaacacgcctcatggcttcatc
tgcaaatgtccacctggcttcaccggctcctcttgtgagtacgattctcgctcctgcggg
agtctgaattgcaggaacggtggtacatgtgtgtcgggccacctaggcccacgctgcttg
tgtccaccgaccttcactgggccagagtgccagacccccaccgacagcctctgcatctcc
aacccctgctacaacggcggaacgtgccaggtcaccccggacgcgcctttcttccattgc
agctgccccagcaatttcaacggcctgctctgccacatcctggactattccttcgtcgga
ggttttggccgggacatcaccccgccgccggaggtggaggtgagctgcgagatcgctcag
tgcgacgagtgggccggcaaccatatctgcgactcgctgtgcaacaaccacgcctgcggc
tgggacggaggcgactgctcgcttaacttcgatgacccttggcaaaactgctcggcggct
ctgcagtgctggcgctactttaacaacgggaagtgcgacggacagtgcaacagccccggg
tgtctctacgatggctttgattgtcagggacaggaaggacaatgcaacccactgtatgac
cagtactgtaaagaccactacgctgacggtcactgtgaccagggctgcaacaatgcagaa
tgcgaatgggacggcctggactgcgcaaacaacatgccggagaagctcgcagacgggcat
ttagtcttggtggtccatattccccccgaacagctgaaaaacagctcttcaaccttcctc
agagagctcagcagcgttctccacaccaacgtggtgttccgccgggacgccaaaggagag
ccaatgatcttaccgtactatggcaacgaacaggacctcgtcaaacacaacgtgctgaag
cgctccgcggagggctggcccgagtgggcttcaatgcccgccaatgttttgggtcaagtg
aaggaaagcgtgtcggccatggtcagcccccgcaaacgcagagagctggatcctgtgcaa
gtcaaagggtctgtggtgtacctggagattgacaaccggcagtgttaccagcagtctact
gaatgcttccagagcgccacagacgtagcggcattccttggagcgcttgccactagcggg
aatctcaatgttccctacattgaggctgtcaccagtgtgagacctactcccaccacttca
gagctgtatcccatgtacgtggtcttcctgggtttggccgcgttgggtttcatctgcctt
ggtgttctggtgtctcgcaagaggcgacgagagcacggccagctctggtttcccgaaggt
ttcaaagcgtccgagcccagcaaaaagaaacgcagagagccgttgggagaagattctgtg
ggattagggcctatgaaaaactctgacatcaatcttatggatgacaatcaaaacgaatgg
gatgatcaggatccagactgcagacgcttcaggtttgaggagcaggccatgctggatttg
agcgaccgtaccgaccacaggaaatggacgcagcaacatctggatgcagctgacctgcgc
attgcgtccattgctcctacgcctcctcagggagagatagagaatgactgcatggatgtg
aatgtcaggggaccagatggtttcactcccctgatgatcgcatcctgcagcggtggaggc
ctggagaccgctaacatcgaagaggaagaagatccctcagcagaaatcatctcagacttt
atttaccaaggcgccaacctccacaaccagactgaccgcacaggcgagaccgccctccac
ctggccgcccgctacgcccgctccgatgctgcgaaacgccttctggagtccagcgccgac
gccaacgttcaggacaacatgggtcgcactcctctccacgctgctgtcgctgcagatgcg
cagggagtgttccagattttaatccggaaccgcgccactgatctcgacgcccgcatgcac
gacggaaccacaccgctcatcctggcggcccgattggcggttgaggggatggtggaagag
cttatcaactgccacgcggatgccaacgccaccgatgattctggtaaatccgctcttcac
tgggctgcggcggtaaacaatgtggaggcggctatggtgctgctgaaaaatggtgccaac
aaagacatgcaagacaacaaggaggagacaccagttttccttgcagcccgggaaggaagc
ttcgaaacagccaaggttcttctggaacattttgccaatcgtgagatcaccgaccatctc
gaccagctgcccagagacatcgcacaggaacgcatgcaccatgacatcgtccgccttctg
gatgagtacaacgtggtcaggagtcccgggcttcacagcggcccacttagcgcctccagc
ctctcgccacctctctgctcccccaatgactaccttagcaacctcaagcccatgctgtcc
gtcaagaaggttcgcaaactcagctccggcggcaaaggagggaaggacggaggcaaagat
aatcggatgaagaagaagaagtccctggatggaaagggcaacttgctcgactcgtcaggt
gtcctctcgccggttgattccctcgagtcaccgcacggctacctgtccgatgtggcctct
cctcccatgacatcacccttccagcagtcgccgccgcccatgtctctgaatcacctgcaa
ggcaatggagaccatatgggccagatgagtatgggtaaggatatgggctgtatgtctttt
gaccacaaccctccccgtctctcccacatgcctgtgtccagccccggcactcagggcacg
acatccataggcggcagcagaggaggccagtgtgactggatctccaggatgcacccaggt
gtaggccagcaagggggcttcacccaggggtcaaccctatcccacggcatgatgggggct
ctgcatggcgtcagcactgccaccctgtctcagatcatgggctaccagaatctgcagacg
agccacctcggttcgtctgcacacatgatgcagcaggctcattcccggcagctccagcac
cagaactctaactccaccacagccggccagtccctcagccagagcttcccgagcgttgag
ctgaacggctcagacatgcagcagaacaacgggcgctccatgcccatccacaccgtcatg
ccgcaggagacgcagatcctcggcaaccagttcctcactcctccctcacagcacagctat
tctggccccatggacaacacacccaaccaccagctacaggtacctgaccacccgtttcta
accccctcccccggctcccccgaccaatggtccagctcgtccccacattccaacatgtcc
gattggtcggaaggcatctcaagcccgcctacaagtatccactcgcagatgaatctgatt
ccagaccagtttaagtag
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integrated database retrieval system
