Gasterosteus aculeatus (three-spined stickleback): 120833598
Help
Entry
120833598 CDS
T07457
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
KO
K10798
poly [ADP-ribose] polymerase 2/3/4 [EC:
2.4.2.30
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03410
Base excision repair
gat04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120833598 (parp4)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120833598 (parp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gat03032
]
120833598 (parp4)
03036 Chromosome and associated proteins [BR:
gat03036
]
120833598 (parp4)
03400 DNA repair and recombination proteins [BR:
gat03400
]
120833598 (parp4)
Enzymes [BR:
gat01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
120833598 (parp4)
DNA replication proteins [BR:
gat03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
120833598 (parp4)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
120833598 (parp4)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
120833598 (parp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIT
PARP
VWA_3
VIT_2
VWA
BRCT_2
VWA_2
VWA_CoxE
BRCT
Motif
Other DBs
NCBI-GeneID:
120833598
NCBI-ProteinID:
XP_040056780
LinkDB
All DBs
Position
XVI:complement(17365754..17378074)
Genome browser
AA seq
1771 aa
AA seq
DB search
MAVFEHSLLLLELKALTPTEKRKLRSAVTDNGGTICYVVNKQCSLVVTGNLADLSASRLR
GIRRHGTPVVGVDYVYGCLERGFLLPADDYKLEASSPPPACPAAAAATPRHALAAPPVEP
SQGSVGPGQRALSAGVREEFRIYTETDPDLPKYPLNFQVAKYCVFEKGNGGAWCVLELQS
HAGEGARRYRVVRYWKDDVSAEAAAVRDALVFLSASEDAVEVYEAQRESLQAAGLQPRTS
TPPQAPHLGSAPLQQLLLEERLNTGSLSQEVGVFVELLWTEALGRLGNILRVPIHKLSLN
DVSRAEGLLLQAHSKLRGADGSEVASLLHEVHAVLLHVAPSQTPPTARLISQRLDLCQLI
RDVLNVSEMTMGSSAPSSLGKYRAMRCSIDAVPPDSPEFQAVAALVRDSRVHVQRVLRVS
RGAELQAFKSELGNIKPLLHSSSPSNFVGVLSRGLLLPRVGVEHHGIERTDVGSLGSGIY
FSDAVSTSLKYSKPSETDGSRLLLVCDVALGRCKDEHKGDVTLTRAPEGHHSVHGVRRGP
NAPSEFEDDEYVVYSPDQVKLKYVVQFAVEGDRLKEFSPAIDTSAQPAPPSCDRGWDDEE
DVGSIRNPLAEAKAGLLDGSGQQLPLRAVHVRCKLMDLLSQVVVFQEYTNRGSAPIEAKY
VFPLDDSAAVCGFEAFINGKHVVGQVKEKETARKEYKQAVEKGHGAYLMDQDAPDVFTIS
VGNLPPGASVLIKVTFVCELVVRDGSVLFSLPGSVAPWQEGAALNQTTQVTVEKVCVMFE
EDREFTLDMSVEMPNKITDLQCITHRVRIKRTDCKAVVSVLPGELMGVDGFQLSITLSEV
HLPRMWVEKHPDKDSQACMLVFYPDFEVESSSAPDEVVLLVDSSESMKGEPLLAARRIAL
QVLKTLGSHLRVNVLFFGTDHTEAFPTARPLGDARADAEVVVKLAPPVGGGTELWRPLRA
LGLLPPSRGVRNLLLLSDGHVQNAELALRLLRDGAGRSRLFACGLSPTANRHMLRALAQA
GGGAYEFFDTKTKHNWAEKVARQVKRMASPGCSSVAVKWQQFSPTAASPVQAPRQLPALF
NDCHALVYGFVPHCTQATLRGNLSGQELNTMVSTSELQKTRGTFLHKLTARALIRDHEDG
SLDGDEAQHEGRKAELKRFIVELSKEFSILSQFTSFVAVEERNSTQTEEGVTDIPKLISE
EDVDFLPYLDWTRTSPSEDESPVGCCLSMVEMDVEGTDVFLGDMATSHGLSSDVEEDYYP
NACYDDIMMTESISPACSPPFTHKSEASNGAVCLKRRSERQKVREEVDSEEVSYCHPPAS
ASSSSYYPPPRPFGGSLLQPQSAALHVLPPPPPPHLFGISLKNRQPAALLPPPPRPFRGS
CGEPQSAALHVLPPPPPRPFLGSLGEPQPAAHHPIWPHYGSARSDLAFGSAFSGLQPVNQ
PAGSVLIDSVEVRTPWSSMGGVEDEPQCPGERLESDLETCFLATNLDSPSPDISSQQQQL
RVLADSVQSPKKKLFKQVEARSRRLASLIAGPEQSYLGSSCDGSMAEFPSLKQDQPMTVG
PPVPSRRARRLSSSGIASNLPAVYGLYVSDRRCSMEHRSASHRRPQIGARAEPERLRLKW
TNVFLMQHSEGFWELTTQLGELVNVDVDLFANEFLKNKGIRSLGVRAHTDILRLLATLLV
LQLMRVEKLEEGKLLRTLFSLDESPPPRPARWEEVKRAVHWVCWADRRYPCVYSRLEFGL
SWETSTRQLLGFEGLPPFSALRGLKLQLLAL
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtttgagcactccctcctgctcctggagctcaaagctttgacccccacggag
aagaggaagctgagatcagcggtcacggacaacggaggcacgatttgctacgtggtcaac
aagcagtgctctctggtagtgaccggcaatttggccgacctgagcgccagtcgtctgcgt
ggcatccggaggcacggcacgcccgtggtgggggtggactacgtgtacggctgcctggag
agaggcttccttctgcccgcggacgactacaagctggaggcctcctcgcctcctcccgcc
tgccccgccgccgccgccgccaccccacgccacgcgttggcagcaccgccggtcgagccg
agccaggggtcagtcgggccgggtcagagggcgctgagtgcaggcgtgcgggaggagttc
agaatttacaccgaaaccgatcccgatctcccgaagtatccgctcaactttcaagtggca
aagtattgcgtctttgaaaagggaaacggcggcgcctggtgcgtgctggagctgcagagc
cacgcgggggagggcgcacgtcggtaccgagtggtccgctactggaaggacgacgtgtcg
gccgaggcggcggcggtgagggacgcgctggtcttcctgtcggcgtccgaggacgctgtg
gaggtgtacgaggcccagcgagagagcctgcaggccgccgggctgcagcccaggaccagc
actcccccacaagccccccacctgggctctgcccccctccagcagctgctgctggaggag
aggctgaacacgggaagcttatcgcaggaagtgggcgtgttcgtagagctgctgtggacc
gaggccctgggtcgcctcggcaacatcctccgagtacccatccacaagctgagcctcaac
gacgtcagcagggccgagggcttgttgctccaggctcacagcaagctgaggggggcggat
ggttctgaggttgcgtcgctccttcatgaggttcacgccgttctgttgcacgtggcgccc
tcccagactcctcccactgccaggctcatctcccagagactggacctgtgccagttgatc
cgagatgttctgaacgtgagcgagatgaccatggggagctccgccccctcctccctgggg
aagtaccgcgccatgaggtgcagcatcgacgccgtcccccccgattcccccgagtttcag
gccgtggccgctttggtgcgggacagccgggtgcacgtccagcgggttctgcgcgtcagc
aggggggcggagcttcaggcgtttaagagcgagctggggaacattaagcccctcctccat
tcctccagccccagcaactttgtgggggtcctgtctcgcggcctgctgctgccgcgtgtc
ggagtggagcatcatgggatagagaggaccgacgtcggtagcctgggcagcggaatctac
ttcagtgatgccgtcagcaccagcctgaaatactccaagcccagcgagacggacggctcc
cggctgctgctggtgtgcgacgtggcgctgggacgctgcaaggacgagcacaagggggac
gtcacgctcacccgggctcccgagggacaccacagcgtgcacggcgtccgccgcggcccc
aacgccccctccgagttcgaggacgatgagtacgtggtctacagtcccgatcaggtgaaa
ctgaagtacgtggttcagttcgcggtcgagggcgaccgtctgaaggagttcagcccggcc
atcgacacctcggctcagccggctccgccctcttgtgaccgaggttgggatgatgaggaa
gacgttggcagcatcagaaacccgctggcggaggcgaaggccggactgttggacggctcg
ggtcagcagctccccctgcgggccgtgcacgtgaggtgcaaactgatggatcttctctcc
caggtcgtcgtcttccaagaatacaccaaccggggctccgcccccatcgaggccaagtac
gtcttcccattggacgattctgcggcggtttgtgggtttgaagctttcatcaatgggaag
cacgtggtgggacaggtgaaggagaaggagacggctcggaaggagtacaagcaggctgtg
gagaaaggccacggggcctacctcatggaccaggacgccccggacgtgttcaccatcagc
gtgggaaacctgccgcccggagcctccgtcctcatcaaggtcaccttcgtgtgcgagctg
gtcgtcagggacggcagcgtgctcttctctctgcccggcagcgtggctccgtggcaggaa
ggggcggcgctcaaccagaccacgcaggtgactgtggagaaggtgtgtgtgatgtttgag
gaggacagagagttcacgctggacatgtcagtcgagatgcccaataagatcaccgacctg
cagtgcatcactcacagagtcaggatcaagaggacggactgcaaggcggtggtgagcgtg
ctgcccggtgagctcatgggtgtcgacggtttccagctgtcaatcactctgtctgaggtg
cacctgcccaggatgtgggtggagaaacaccccgacaaggacagccaggcctgcatgttg
gtgttctatccggactttgaggtggagtcctcgtcggcccccgatgaggtggtcctcctg
gtggactcgtctgagtccatgaagggagagcccctcctcgccgcccggaggatcgccctg
caggtcctcaaaaccctcggcagccacctgagggtcaacgtgctcttcttcggcacggac
cacacggaagctttcccgacggctcggccgctcggtgacgctcgcgcggacgcagaggtc
gtggtcaagctcgcccctcctgtagggggcggcaccgagctgtggcggcccctgagggcc
ctcggcctgctgcccccgtcccgcggcgtcaggaacctcctgctgctgtcggacggccac
gtgcagaacgccgagctcgccctgcggctgctccgggacggcgccggccgcagccgcctc
ttcgcctgcggcctcagccctacagccaatcggcacatgctgagagccttggcccaggcg
gggggcggagcctatgaattctttgacacgaaaaccaaacacaactgggcggagaaggtg
gcgcggcaggtgaagcggatggcttcccccggctgcagctcggtggcggtaaagtggcag
cagttcagcccgacggcggcctctccggtccaagcgccccggcagctccccgcgctgttc
aacgactgccacgcgctggtctacggcttcgtgccgcactgcacgcaggccactctgcgc
ggaaacctgagcggtcaggagctgaacaccatggtgtcgaccagcgagctgcagaagacc
aggggcacgtttcttcacaaactcacagcgagggctctcatcagggatcacgaagacgga
agcctggacggcgacgaagcccagcacgaggggaggaaagcggagctaaagcgattcatc
gtcgagttaagcaaagagttctccatcctgtctcagttcaccagcttcgtggccgtcgag
gaaaggaactcgacacaaaccgaggagggcgtcaccgacatccccaagctgatctcagag
gaagacgtggacttcctcccctacctcgactggacccggacgtctcctagtgaagacgag
tccccggttggctgttgtctatcgatggtagaaatggatgttgaggggacggatgtcttc
ttgggagacatggcaacatcacacgggctcagcagtgatgtggaggaggattattatcca
aacgcatgttatgacgatataatgatgactgaaagcatctctccagcctgttcaccaccc
tttactcacaagtctgaggcatcgaatggtgcagtttgcttgaaaaggaggagtgaaagg
cagaaggtcagagaggaggtggacagtgaggaagtttcctattgtcatcctccagcttct
gcttcttcttcttcttattatcctcctcctcgtccgttcggaggttcacttctgcaaccc
caatctgcagccctccacgtccttcctcctcctcctcctcctcatctgttcggaatttca
cttaagaaccgccaacctgcagccctccttcctcctcctcctcgtccgttccgaggttca
tgtggggaaccccaatctgcagccctccacgtccttcctcctcctcctcctcgtccgttc
ctaggttcacttggggaaccccaacctgcagcccaccacccaatatggccccattatggt
tctgccaggtcagacctggcctttggttcagcattctcagggttacaacctgtcaatcaa
cctgcaggttccgttctaatcgattcagtagaggttcgcaccccgtggagcagcatgggg
ggcgttgaggatgagcctcagtgtcctggcgagagattagaaagtgatctggaaacgtgc
ttcctggcaactaatctcgactcgccgtccccagatatttccagccaacagcaacagttg
cgtgtccttgcggactctgttcagtccccaaaaaagaagctgtttaaacaggtcgaggca
cgatcaagacggctcgcaagtctgatcgcaggtccagaacagtcctatttaggttccagt
tgcgatggctcaatggctgaattcccatccctcaaacaagatcagccaatgacagtcggc
cctccggttccatctcgcagagcaagacgtctctcgagttcaggaatagcttcaaacttg
ccagcggtttatggcttgtatgtgagtgacaggcggtgttcaatggagcacagatctgcg
tcacatcgtcgaccccagataggtgcgagagcggaacctgaacggctccgtctcaagtgg
acaaacgtcttcctgatgcaacattcggagggcttctgggagttgaccacacagctgggt
gaactcgtcaatgtcgacgtagacctcttcgccaacgagttcctgaaaaacaagggcatc
cggtctctaggtgtgagggcccacactgacatcctcaggctgctggcaacccttctggtc
ctgcagctgatgagggtggagaagctggaggagggcaaactgctccgcacgctcttcagc
ctggacgagtcccccccgcccaggccggcgcgctgggaggaggtgaagcgggcggtgcac
tgggtttgctgggcggaccgccggtacccgtgcgtctacagccggctggagtttggtctg
agctgggagacctccacccggcagctgctgggcttcgagggcctcccccccttctccgct
ctcagggggctgaagctgcagcttctggccctctga
DBGET
integrated database retrieval system
