Gordonia alkanivorans: C5O27_11425
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Entry
C5O27_11425 CDS
T05876
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
gav
Gordonia alkanivorans
Pathway
gav00190
Oxidative phosphorylation
gav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gav00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
C5O27_11425
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C5O27_11425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gav03019
]
C5O27_11425
Enzymes [BR:
gav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
C5O27_11425
Messenger RNA biogenesis [BR:
gav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C5O27_11425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase
PP_kinase_C
PP_kinase_N
PLDc_2
Motif
Other DBs
NCBI-ProteinID:
AZZ81606
LinkDB
All DBs
Position
complement(2529665..2531860)
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AA seq
731 aa
AA seq
DB search
MSPADDTSTTTATVTTTPIPNAPPAATLVPDESADLPEDRYLNRELSWLDFNSRVLALAE
DTSLPLLERAKFLAIFASNLDEFFMVRVAGLKRRDETGLSVRSADGLSPREQLMRIAGRT
QSIADRHARVFLDSVRPALAANDIYVVSWSQLTDEQRARMVDYFQDEVFPVLTPLAVDPA
HPFPYISGLSLNLAVTVKDINESGEHFARVKVPDNVNRFIRVDQLVPYRGADDGRPKQAV
YLPMEHLIAANLGNLFPGMEVVEHHAFRITRNADFEVEEDRDEDLLQALERELARRRFGS
PVRLEVADDMSEHMLELLLRELDVNPADVIQVPGLLDLSSLFELYDLDRPHLKDRPFVPG
THPAFGERETPKSVFSTLREGDVLVHHPYDSFSTSVQRFIEQAAADPQVLAIKQTLYRTS
GDSPIVNALIDAAEAGKQVVALVEIKARFDEQANIKWARQLEQAGVHVVYGLVGLKTHCK
TCLVVRREGSTIKRYCHIGTGNYNPKTARLYEDVGLLTAAPDIGADLTDLFNTLTGYSRK
KEYRNILVAPQGIRAGIIERIHREIELFRAGDDRARVQLKANALVDEQVIDALYRASQNG
VPVDVVVRGISALRPGMEGVSDNINVRSILGQFLEHSRILHFGAQNEYWIGSADMMHRNL
DRRVEVMVNVRDKRLAGELGDIFDSALDLRTRCWVLQTDGSWVASPAAGEEVRDHQRQMM
RRNRRRPETIS
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
gtgagccctgccgacgacacctcaacgaccaccgcaacggtcacgaccacgccgatcccc
aatgcaccgccggccgcaaccctcgtccccgacgagtccgcggacctgcccgaggaccgg
tacctgaaccgcgaattgagttggctcgacttcaactcccgtgtgctggccctcgccgag
gacacttcgctgccgctcctcgagcgggcgaagttcctcgccatcttcgcctccaacctc
gacgagttcttcatggtccgggtcgccggcctgaagcgtcgcgacgagacgggtctgtcg
gtccggtccgccgacgggttgtccccgcgcgagcagctgatgcgcatcgccggccgcacg
cagagcatcgccgaccgccatgcccgcgtcttcctcgactcggtccggccggcgttggcc
gccaacgacatctatgtcgtctcctggtcgcagctgaccgacgaacaacgcgcccgcatg
gtcgattacttccaggacgaggtcttccccgtcctgacgccgctggccgtcgacccggct
cacccgttcccgtacatcagcggcctgtcgctgaacctcgcggtgaccgtcaaagacatc
aacgagagcggcgagcatttcgcgcgagtgaaggtccccgacaatgtgaaccgcttcatc
cgggtcgatcagctggtgccgtaccgcggcgccgacgacgggcgccccaaacaggcggtg
tacctccccatggagcacctcatcgccgccaacctgggcaacctgttccctggcatggaa
gtcgttgagcatcacgccttccggatcacccgcaacgccgacttcgaggtagaggaagat
cgcgacgaggatctcctgcaggcgctcgagcgggaactcgcccgacgccggttcggctcg
ccggtccgactcgaggtggccgacgacatgagcgagcacatgctcgaactgttgctgcgc
gaactcgacgtgaacccggccgacgtcatccaggtgcccggtctgctcgatctgtcttcg
cttttcgagctctacgacctcgatcggccgcatctgaaggaccgcccgttcgtgccgggc
acgcacccggcgttcggcgaacgggagacgcccaagagcgtcttctccacgctgcgcgag
ggtgatgtcctcgtgcaccacccttacgattcgttctcgacgagcgtgcagcgcttcatc
gaacaggccgcggccgaccctcaggtcctcgcgatcaagcagacgctgtaccgcacctcg
ggtgactccccgatcgtcaacgcgctcatcgacgccgccgaggcaggcaagcaggtcgtg
gcgctggtggagatcaaggcccgcttcgacgagcaggccaacatcaagtgggcccggcaa
ctcgagcaggcgggagtgcacgtcgtctacggactcgtgggactcaagacgcactgcaag
acgtgtctcgtggtgcggcgtgagggctcgacgatcaagcgctactgccacatcggcacc
ggcaactacaacccgaagaccgcgcggttgtacgaggacgtgggcctgctgacggccgcc
cccgacatcggcgcggacctgaccgacctgttcaacacgctgaccggatactcacgcaag
aaggagtaccggaacatcctcgttgccccgcagggcatccgggcgggcatcatcgagcga
atccaccgcgagatcgaactgttccgcgcgggcgacgatcgtgcccgcgtgcagctgaag
gccaacgcgctggtcgacgagcaggtgatcgacgcgctgtatcgcgcgtcccagaacggg
gttccggtcgacgtggtggtccgcggcatcagcgcactgcgcccggggatggaaggtgtc
agcgacaacatcaacgtccggtccatcctcggtcaattcctcgagcactcgcgaatcctg
catttcggtgcccagaacgagtattggatcggcagcgccgacatgatgcaccgcaatctc
gaccgccgcgtcgaggtgatggtgaacgtacgcgacaagcgtcttgccggcgagctcggc
gacatcttcgactcggccctcgacctccgcacccgttgctgggtcctgcagaccgacggt
agctgggtggcctcacccgccgccggcgaagaggtccgcgatcaccagcggcagatgatg
cgccgcaatcgtcgtcggccggagaccatttcgtga
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