Gemmatirosa kalamazoonensis: J421_0897
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Entry
J421_0897 CDS
T03025
Name
(GenBank) Pyridoxal-5'-phosphate-dependent protein beta subunit
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00260
Glycine, serine and threonine metabolism
gba00270
Cysteine and methionine metabolism
gba01100
Metabolic pathways
gba01110
Biosynthesis of secondary metabolites
gba01230
Biosynthesis of amino acids
Module
gba_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
J421_0897
00270 Cysteine and methionine metabolism
J421_0897
Enzymes [BR:
gba01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
J421_0897
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
CBS
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
AHG88434
UniProt:
W0RBF9
LinkDB
All DBs
Position
complement(1021662..1023089)
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AA seq
475 aa
AA seq
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MTIVATPEVVRNKRPYGSVLETIGWTPLIRLSRVVRGCRTPVYGKADFFNPGGSVKDRIG
LPIIEAAERSGALKPGGTIVEGTSGNTGVALAIAAVMRGYRCVFTMPDKMSQEKVRLLKA
FGAEVIITPTAVPPDHPDSYVMMAKRIAEATPNAILANQFYNQANPDAHYATTGPELWEQ
TDGRITHFVAAAGTGGTITGVARYLKERNPDVKIIAGDPQGSILAELFRRRNSGGDAGEK
PVGTPYKVEGIGQDKLPGTLDLSLVDEFHTVSDRDSFAMARRLTREEGLFVGGSSGLITH
VALRLARQLDDPRACVVTFLCDTGERYLSKLYNDEWMRENQLLEPDRATLGHLLAQRGAD
VPQLVSTAPGALVRQALGLMKLHDVSQLPVMEGDRCVGSVTEYHLTTRGLESSRFLDATV
GEVMDEAFPTVDAGQAVDAVTKLLSKASPALLVTDRGRVTGIVTRSDVLQFLMTR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgtcgcgactcccgaggtggttcgaaacaagcggccgtacggcagcgtgctc
gagaccatcggctggacgccgctcatccggctgagccgcgtggtgcgcggctgccgcacg
ccggtgtacggcaaggccgacttcttcaatcccggcggcagcgtgaaggaccgcatcggg
ctgccgatcatcgaggcggcggagcggtccggggcgctgaagcccggtgggacgatcgtg
gagggcacgagcggcaacaccggcgtcgcgctcgcgatcgcggcggtgatgcgcggctac
cggtgcgtcttcaccatgccggacaagatgtcgcaggagaaggtgcgtctgctgaaggcg
ttcggggccgaggtgatcatcacgccgaccgcggtgccgcccgaccacccggacagctac
gtgatgatggcgaagcggatcgccgaggcgacgcctaacgcgatcctcgcgaaccagttc
tacaaccaggcgaaccccgacgcgcactacgcgacgacgggccccgagctgtgggagcag
accgacggacgcatcacgcacttcgtggccgcggcggggaccgggggaacgatcaccggc
gtggcgcgctacctgaaggagcggaaccccgacgtgaagatcatcgccggcgacccgcag
gggtcgatcctggccgagctgttccgacgccggaacagcggcggggatgccggcgagaag
cccgtcggcacgccgtacaaggtggagggcatcggacaggacaagcttcccggcacgctc
gacctctcgctcgtcgacgagttccacaccgtgagcgaccgcgactcgttcgcgatggcg
cggcggctgacgcgcgaggaggggctgttcgtgggcggctcgtcggggctcatcacgcac
gtcgcgctgcggctcgcgcgtcagctcgacgacccgagagcgtgcgtggtgacgttcctc
tgcgacaccggcgagcggtacctgtcgaagctgtacaacgacgagtggatgcgcgagaac
cagctgctggagccggaccgcgcgacgttaggccacctgctcgcgcagcgcggcgccgac
gtcccgcagctcgtgagcaccgcgccgggcgcgctcgtgcggcaggcgctgggcctcatg
aagctgcacgacgtctcgcagctgccggtgatggagggcgaccggtgcgtcggcagcgtg
accgagtaccatctgacgacgcgcggcctcgagagctcgcgcttcctcgacgcgacggtg
ggcgaggtgatggacgaggcgttcccgacggtcgacgcggggcaggcggtcgacgccgtg
acgaagctcctctcgaaggcgtcgcccgcgctgctcgtgaccgaccgtggccgcgtgacc
ggcatcgtcacgcgcagcgacgtgctgcagttcctgatgacgcggtag
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