Gemmatirosa kalamazoonensis: J421_1854
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Entry
J421_1854 CDS
T03025
Name
(GenBank) Xylose isomerase domain-containing protein TIM barrel
KO
K01820
L-rhamnose isomerase / sugar isomerase [EC:
5.3.1.14
5.3.1.-]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00040
Pentose and glucuronate interconversions
gba00051
Fructose and mannose metabolism
gba01100
Metabolic pathways
gba01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
J421_1854
00051 Fructose and mannose metabolism
J421_1854
Enzymes [BR:
gba01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.14 L-rhamnose isomerase
J421_1854
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GFIT
Motif
Pfam:
AP_endonuc_2
DUF6074
Motif
Other DBs
NCBI-ProteinID:
AHG89391
UniProt:
W0RF22
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All DBs
Position
2128903..2130186
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AA seq
427 aa
AA seq
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MTIAPPDARAADDAALDDHRRDYESLAERLDRRGLRADDVVDAVRRFEVAVPSWALGTGG
TRFGRFPGPGEPRTLDEKLEDAAVVHRLTGATPRVSLHLPWDDPRDPDALKAHAAQLGLG
FDAVNSNTFQDQQGQRLSYKLGSFSHPDAAVRRQAVDHNLHVVEVGRALGAEAITIWLAD
GSNYPGQMSLRRSFDRVLDCLREVYAALPAGWRLFTEHKPYEPAFYATVVQDWGSSLLLA
QSLGDRAQCLVDLGHHLPNTNIEMVVARLLGAGKLGGFHFNDSKYGDDDLTAGSIKPYAL
FLVFHELVLAERDRLPSFRPAYMIDQSHNLKDPVEDLLQTVDQLQLACAKAWLVDHDALA
AHQESGDVLMAERTLKDAFETDARPLVAEARRRAGAALDPVRAFRTSGYRATKSAERVGG
IVEARGL
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcgctccccccgacgcgcgcgcggccgacgacgcggccctcgacgaccaccgg
cgcgactacgagagcctcgccgaacggctcgatcgccgcgggctgcgcgccgacgacgtg
gtggacgcggtgcgccggttcgaggtggcggtccccagctgggcgttaggcaccggcggc
acgcgcttcggccgctttcccgggcccggcgagccgcgcacgctcgacgagaagctcgag
gacgcggccgtcgtccatcgcctcaccggcgccacgccgcgcgtctcgctccacctgccg
tgggacgatccgcgcgaccccgatgcgctgaaggcgcacgccgcgcagctcgggctcggc
ttcgacgcagtgaactccaacacgtttcaggaccagcagggccagcggctcagctacaag
ctcggctcgttcagccaccccgacgccgcggtccgccgccaggccgtcgaccacaacctc
cacgtcgtggaggtgggccgcgcgctcggcgccgaggcgatcacgatctggctcgccgac
ggctcgaactatcccgggcagatgtcgctgcgacgctcgttcgatcgcgtgctcgactgc
ctgcgcgaggtgtacgccgcgcttcccgcaggctggcggctgttcaccgagcacaagccc
tacgagcccgcgttctacgcgacggtcgtgcaggactggggctcctcgctgctgctcgcg
caatcgttaggcgaccgcgcacagtgcctcgtggacctcggccaccatctgccgaacacg
aacatcgagatggtcgtcgcgcggctgcttggcgcggggaagctcggtggcttccacttc
aacgactcgaagtacggcgacgacgacctcacggccggctccatcaagccgtacgcgctg
ttcctcgtcttccacgagctggtgctggcggagcgggaccggctgccgtcgttccggccg
gcgtacatgatcgaccagagccacaacctcaaggatccggtcgaggatctgctgcagacg
gtcgatcagctccagctcgcgtgcgcgaaggcgtggctcgtcgaccacgacgcgctcgcc
gcgcaccaggagagcggggacgtgctcatggccgagcggacgctgaaggacgcgttcgag
accgacgcgcgcccgctcgtcgccgaggcgcgccggcgcgccggtgccgcgctcgatccc
gtgcgcgcgttccgcacttctggctatcgcgcgacgaaatcggcggagcgcgtcggcggc
atcgtagaggcgcgcgggctgtga
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