Gemmatirosa kalamazoonensis: J421_4274
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Entry
J421_4274 CDS
T03025
Name
(GenBank) delta-aminolevulinic acid dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00860
Porphyrin metabolism
gba01100
Metabolic pathways
gba01110
Biosynthesis of secondary metabolites
gba01120
Microbial metabolism in diverse environments
gba01240
Biosynthesis of cofactors
Module
gba_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
gba_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
J421_4274
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gba04147
]
J421_4274
Enzymes [BR:
gba01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
J421_4274
Exosome [BR:
gba04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
J421_4274
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
DUF6248
Motif
Other DBs
NCBI-ProteinID:
AHG91811
UniProt:
W0RM36
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All DBs
Position
complement(4975186..4976217)
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AA seq
343 aa
AA seq
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MSMSYTPESTAEREAAIDPRSAIGRLRRNAAARRMLAETLLRPEHLVLPLFVKDGRDSVT
PIASLPGQSQWTVDRLGAEIDAIVAAGIPAVLLFGIPDAKDAEGTGAWDPEGAVPRAARM
IKERAPGLLVVADVCLCEYTSHGHCGTLDATGSCVDSHATLPPLARAAVAYADAGVDVVA
PSAMMDAQVAAIRAALDGAGHRDVSILSYSTKFASAFYGPFRDAVASAPSFGDRATHQLP
PANAREAVRESLRDEKEGADMLMVKPAGPYLDVIQRIRAKSLLPIAAYQVSGEYALLKAA
AERGWIDERRAALESLVAIRRAGADLVITYYAKDAARWLREGA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtcgtatacaccggagtccaccgccgagcgcgaggccgcgatcgacccgcgg
tccgcgatcggccggctgcgccgcaacgcggccgcgcgccgcatgctcgccgagacgctg
ctgcgtcccgagcatctcgtcctgccgctgttcgtgaaggacggccgcgactcggtgacg
ccgatcgcgtcgctgcccgggcagtcgcagtggaccgtcgatcggttgggtgcggagatc
gacgcgatcgtcgccgcggggattccggcggtgctgctgttcggcatccccgacgcgaag
gacgccgaggggacgggcgcgtgggatccggagggggccgtgccacgcgcggcgcgcatg
atcaaggagcgcgcgccggggctgctcgtcgtcgccgacgtgtgcctgtgcgagtacacg
tcgcacggccactgcggcacgctcgacgccaccgggagctgcgtcgactcgcacgccacg
ctgccgccgctcgcgcgcgcggccgtcgcgtatgccgacgccggcgtcgacgtcgtcgcg
ccgagcgcgatgatggacgctcaggtcgccgcgatcagggccgcgctcgacggcgccggc
catcgcgacgtctcgatcctgtcctactcgacgaagttcgcgagcgcgttctacggcccg
ttccgcgacgcggtggcgagcgcgccgagcttcggcgaccgcgccacgcaccagctcccg
ccggcgaacgcgcgcgaggcggtgcgcgagtcgctgcgcgacgagaaggagggcgccgac
atgctcatggtgaagccggccggcccgtacctcgacgtcatccagcgcattcgcgcgaag
tcgctgctgccgatcgccgcgtatcaggtgagcggcgagtacgcgctgctgaaggcggcc
gcggagcgcggctggatcgacgagcggcgtgccgcgctcgagtcgctcgtcgcgatccgg
cgcgcgggcgcggacctggtgatcacctactacgcgaaggacgccgcgcggtggctgcgc
gagggggcgtga
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