Gemmatirosa kalamazoonensis: J421_4520
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Entry
J421_4520 CDS
T03025
Name
(GenBank) glycoside hydrolase family 2 sugar binding protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
gba
Gemmatirosa kalamazoonensis
Pathway
gba00052
Galactose metabolism
gba00511
Other glycan degradation
gba00600
Sphingolipid metabolism
gba01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gba00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
J421_4520
09103 Lipid metabolism
00600 Sphingolipid metabolism
J421_4520
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
J421_4520
Enzymes [BR:
gba01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
J421_4520
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Glyco_hydro_2_C
DUF4982
Glyco_hydro_2_N
Glyco_hydro_2
BetaGal_gal-bd
BetaGal_ABD2
DUF4325
Big_1
Motif
Other DBs
NCBI-ProteinID:
AHG92057
UniProt:
W0RNI2
LinkDB
All DBs
Position
complement(5266021..5268726)
Genome browser
AA seq
901 aa
AA seq
DB search
MALAAALLIPSGALGAQPSPRSRVSLDDDWRFTRGDPAGLTVDLRYDVRPEVRDDRDDRP
ADAQPRAATVPNATATTVLKPWILPTGNRFIADPARRHAPPATPWTGDVPYLRADFDDGA
WQRVRLPHDWAIAGPFLTTGNTGGMGRLPTAGVGWYRRKLRVPASDAGKSVFLDVDGAMS
YATVWLNGALVGGWPYGYTSWRVDLTPYVVPGGINQLAIRLDNPPQSSRWYPGAGIYRHV
WLTTTDRVHVAQWGTVVRARDVSGEAATLDIDVDIDDDAASDATVRTTTRIYALDAAGRR
GAAPVASLPAVDTTIAAGTRVVVRRSVVLRHPRRWGPPPTQRPNRYVAVTTLTRGGRTID
TYETRFGVRDVRFHPDSGLLVNGEHVPIRGVNDHHDLGALGAAFDARAAERQLLTLRAMG
ANAVRMSHNPPAPELLALTDSLGFLVLDEAFDVWERAKTPLDFHLVFDDWHEPDLRAMVR
RDRNSPSVILWSIGNEVGEQYTDTAGARIAARLRDIVRSEDPTRPVTSAMNYAKADMPLP
AVLDVIGLNYQGEGIRQEPEFEGTDRIRTPPQYPAFHARFPDKAVLSTETASAFSSRGVY
LFPVEKGITSPVRDGRGGDAKIRQVSAYELYAVDFGSSADKVFASLDRHPYVAGEFVWTG
FDYLGEPTPYYSSRSSYSGIIDLAGFPKDRFWLYQAHWRPDLPMAHLLPHWTWPERVGLV
TPVHVFTSGDAAELFLNGKSLGRKTKGPYEYRLRWDDVVYEPGTLEVVAYKNGRRWATDR
VTTAGAAARLTATPDRPTIRGDGRDLAFVTVRVTDAAGVTAPRASDAIRFTVDGPGEIVA
TDNGDPTSFEPFPSHTRRAFNGLALVIVRATPGRTGRITVTATADGLRAGAATISSVHAP
R
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
gtggcgctcgccgctgcgctgctcatcccgtcaggcgcgttaggcgcgcagccgtcgccg
cggtcgcgcgtctcgctcgacgacgactggcggttcacgcggggcgacccggcggggctc
acggtcgacctgcgctacgacgtgcgccccgaggtgcgcgacgaccgcgacgaccggccg
gcggatgcgcagccccgcgccgccacggtgcctaacgcgaccgcgacgacggtgctgaag
ccgtggatcctgccgaccggcaaccgcttcatcgccgatcccgcgcgccgccacgcgccg
ccggcgacgccgtggaccggcgacgtgccgtatctgcgcgccgacttcgacgacggcgcg
tggcagcgcgtgcggctgccgcacgactgggcgatcgcggggccgttcctcacgacgggg
aacaccggcggcatggggcggctgccgaccgcgggcgtcggctggtatcggcgcaagctg
cgcgtgccggcgtcggatgcggggaagtcggtcttcctcgacgtcgacggcgcgatgtcg
tacgcgaccgtgtggctgaacggagcgctcgtcggcgggtggccgtacgggtacacgtcg
tggcgcgtggacctcacgccgtacgtggtgccgggcggcatcaaccagctcgcgatccgc
ctcgacaacccgccgcagtcgtcgcgctggtatccaggcgcgggcatctaccgccacgtg
tggctgacgacgacggaccgcgtgcacgtggcgcagtggggcacggtcgtgcgggcgcgc
gacgtatcgggcgaggcggcgacgctcgacatcgacgtcgacatcgacgacgacgcggcg
agcgatgcgaccgtgcgcacgacgacgcgcatctacgcgctggacgccgcgggacgacgc
ggcgccgcgcccgtcgcctcgctgccggcggtcgacacgaccatcgctgccggcacgcgc
gtcgtggtgcggcgcagcgtcgtgctgcggcacccgcgccggtgggggcctccgcccacg
cagcggccgaaccgctacgtcgccgtcacgacgctgacgcgcggcggccggaccatcgac
acgtacgagacgcggttcggcgtgcgcgacgtgcgattccatcccgactcggggctgctc
gtgaacggcgagcacgtcccgatccgtggcgtgaacgaccaccacgacctcggggcgtta
ggcgccgcgttcgacgcgcgcgcggcggagcgccagctcctcacgctgcgcgcgatgggc
gcgaacgcggtgcgcatgagccacaacccgcccgcgcccgagctgctcgcgctcaccgac
agcctcgggttcctcgtgctcgacgaggcgttcgacgtgtgggagcgcgcgaagacgccg
ctcgacttccacctcgtgttcgacgactggcacgagccggacctgcgcgcgatggtccgg
cgcgaccgcaacagcccgtccgtgatcctgtggagcatcggcaacgaggtcggcgagcag
tacaccgacacggcgggcgcgcgcatcgcggcgcggctgcgcgacatcgtgcgctcggag
gatccgacgcggccggtgacgagcgccatgaactacgcgaaggccgacatgccgctcccc
gcggtgctcgacgtcatcggcctgaactaccagggggaggggatccgccaggagccggag
ttcgaggggaccgaccgcatccgcacgccgccgcagtatcccgcgttccacgcacgcttc
cccgacaaggccgtgctcagcaccgagaccgcgtcggcgttcagcagccgcggtgtgtac
ctgtttcccgtggagaaggggatcacctcgccggtgcgcgacggccgcggtggtgacgcg
aagatccgccaggtgagcgcgtacgagctgtacgcggtcgacttcggctcgtcggccgac
aaggtgttcgcgtcgctcgatcgacacccgtacgtggcgggtgagttcgtgtggaccggc
ttcgactatctcggggagcccacgccctactactcgtcccgctcgtcctactcgggaatc
atcgacctcgcggggttcccgaaggaccggttctggctgtaccaggcgcactggcgcccc
gacctcccgatggcgcacctgctgccgcactggacgtggccggagcgggtggggctcgtc
acgccggtgcacgtcttcacgtcgggcgacgcggcggagctgttcctgaacgggaagtcg
ttaggccggaagacgaaggggccgtacgagtaccgtctgcggtgggacgacgtggtgtac
gagcccgggacgctcgaggtggtggcgtacaagaacggccggcggtgggccaccgaccgc
gtgacgaccgccggcgccgcggcgcgcctgacggcgacgcccgaccgcccgacgatccgc
ggcgacgggcgcgacctcgcgttcgtgacggtgcgcgtgaccgatgccgccggcgtcacc
gcgccgcgcgcgagcgacgcgatccgcttcacggtcgacggcccgggcgagatcgtggcg
acggacaacggcgacccgacgagcttcgagccgttcccgtcgcacacgcggcgcgcgttc
aacgggctcgcgctcgtcatcgtgcgcgcgacgcccggacgtacgggacgcatcacggtc
accgcgacggcggacgggctccgtgccggcgcggcgacgatcagcagcgttcacgcgccg
cgctag
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