Granulibacter bethesdensis CGDNIH1: GbCGDNIH1_0080
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Entry
GbCGDNIH1_0080 CDS
T00392
Name
(GenBank) Sarcosine oxidase alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
gbe
Granulibacter bethesdensis CGDNIH1
Pathway
gbe00260
Glycine, serine and threonine metabolism
gbe01100
Metabolic pathways
Module
gbe_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
gbe00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GbCGDNIH1_0080
Enzymes [BR:
gbe01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
GbCGDNIH1_0080
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
GbCGDNIH1_0080
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
FAD_binding_2
HI0933_like
Pyr_redox_3
NAD_binding_8
GIDA
Thi4
FAD_binding_3
DAO
AlaDh_PNT_C
Fer2_BFD
Pyr_redox
XdhC_C
VanY
Motif
Other DBs
NCBI-ProteinID:
ABI60978
UniProt:
Q0BW24
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All DBs
Position
complement(88184..91171)
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AA seq
995 aa
AA seq
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MTSPSIHSAPFRLPQGGRIRRDKPLSFTFDGKTYQGAQGDTLASALLAHGVHLMGRSFKY
HRPRGVLSAGADEPNALVGVGAEQSRYTPNLRATQVELYDGLVAESQNRSPSLSFDIGAI
NNALGPFFPAGFYYKTFKWPRKAWDRLYEPVIRRAAGLGKAPTAPDADHYAQRYAHCDVL
IVGAGPAGLAAALAAADAGARVILCDEQSEMGGSLLAPNGAQIDGKPAELWLSDTLAQLA
ADPRVTLLSRTTAFGYYAHNFVGLAQRITDHLPAILPNTPRERMWHVRAGQVVLATGSLE
RPLVFPENDRPGIMLADSARIYAQRYGVKPGTKAVIATANDEAYSTAVALAKAGVEIAAI
ADLREQADGERIAAARAARLPIRMGSAVIGTGGHLRVSSARIGGKQGRDEHIRCDLVLMC
GGFTPTVHLFSQSRGQLVYDAERQIYVPGAHAENERSAGACAGHFGLAVALEDGYSAGLD
AAKGGNSRIFQVSAPAAGTGGFIGEVPHNRRSPYAKAFVDFQNDATAKDIKLAVREGFRS
IEHVKRYTTTGMATDQGKTSNMNALGIVSGALDTPVPQIGLTTFRPPYTPVTFGAFAGTA
RGDLFDPLRKTPIHGWAEEHGAVFEDVGIWKRARYFPQDGEDMDAAVLRECARARAAAGI
FDASTLGKIEVVGPDAAEFLNRLYVNAWDKLKPGKCRYGLLLREDGFITDDGVIGRIAQD
RFHVTTTTSGAPRVLAMMEDYRQTEWPELNVWLTSTTEQWAVIAVQGPKARDIIAPLIEG
VDLNDFAHMSVADATIAGVPGRLFRVSFTGELGYELNVPADYGRAIWEAVYERGQDFGIV
PYGTETMHVLRAEKGYVIVGQETDGTATPDDVGLAWAIGKAKKDFVGKRSLERTSMKDPN
RKQLVGLLTDDPAIVLEEGAQIVADPAHPLPMPMIGHVTSAYRSATLGRSIALAMIKGGR
SRIGQTVYIPMPGRTIAAKVTEFVFYDPEGVRLNG
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgacgagccccagcattcattccgcgcccttccgtctgccgcagggcggccgcatccgg
cgcgacaaaccgctgtccttcacctttgacggcaagacctatcagggtgcgcagggcgat
acgctcgcctccgcgctgctcgcccatggcgtgcatctgatgggccggtcgttcaaatat
caccgtccgcgcggtgtgctgagcgccggagccgatgagccgaatgcgctggtgggcgtg
ggcgccgagcaaagccgctacacccccaatctgcgcgcgacgcaggtggagctgtatgac
ggtctggtcgcggaaagccagaatcgcagcccgtctttgtctttcgatatcggcgcgatc
aacaacgcgctggggccgttcttccctgccgggttctactacaagaccttcaaatggccg
cgcaaagcctgggacaggctctatgagccggtgatccgtcgcgccgccggtctgggcaaa
gccccgaccgccccggatgccgatcactacgcccagcgttacgcgcattgcgacgtgctg
atcgtcggtgccggacctgccggtctcgccgccgctctggctgcggccgatgccggcgcc
agggtgatcctgtgcgacgaacagtcggaaatgggtggctccctgctggcaccgaacggt
gcgcagatcgacggcaagcctgccgagctgtggctgtcggacacgctggcgcagcttgcg
gccgacccgcgcgtgaccctgctgtcccgcaccacggcgttcggttactatgcccataat
ttcgtgggtctggcacagcgcatcaccgatcatctgcctgccatccttcccaacaccccg
cgtgagcggatgtggcatgtccgcgccggacaggtggttcttgccaccggctccctcgaa
cgaccgctggtgtttccggaaaatgaccgtcccggcatcatgctggccgattccgcccgt
atttatgcccagcgttatggcgtgaaaccgggcaccaaagcggtgatcgccaccgccaat
gacgaagcctacagcacggcagtcgcgcttgcgaaagcgggcgtcgagattgccgccatc
gccgatctacgtgaacaggcagacggagagcgcattgccgcggctcgtgctgcccgtctt
ccgatccggatgggatcggccgtgatcggcaccggcggtcatctgcgcgtgtcctccgcc
cgaattggcggcaaacagggacgtgatgaacatatccgctgcgatctggtgctgatgtgt
ggcgggtttacccccaccgtgcatctgttcagccagtcccgtggccaactggtctatgat
gcggaacgtcagatttacgtgcccggcgcacacgcggaaaatgaacgctctgccggtgcc
tgtgcgggtcatttcggcctcgctgtagcgctggaagacggatattccgccggtctggac
gctgcgaaaggcggcaacagccgcattttccaggtcagtgcccccgcagccggcacgggc
ggcttcatcggcgaggtgccgcataaccgccgctccccctatgccaaggctttcgtggat
ttccagaacgatgcaaccgccaaggacatcaaactggccgtgcgggagggcttccgctcc
atcgagcatgtgaagcgctacaccaccaccggcatggccaccgatcaggggaagacctcc
aacatgaacgcgctgggcatcgtgtccggtgcgctggatacgccagtgccgcagatcggc
ctgaccacgttccgtccgccctatacgcccgttacgttcggcgcgtttgcgggcacagcg
cggggcgacctgttcgatccgctgcgcaagacgccgattcatggttgggccgaagaacat
ggcgcggtgttcgaggatgtcggcatctggaaacgggcccgctacttcccccaggacggc
gaggatatggatgcggcggtgctgcgcgaatgcgcccgggcccgtgccgcagccggtatt
ttcgatgcctccacgcttggcaagatcgaagtggtcggaccggatgcggcagagttcctc
aaccgtctgtatgtcaatgcgtgggacaagctgaaacccggcaaatgccgttatggcctg
ctgctgcgtgaagacgggttcatcactgatgacggcgtgatcgggcgcattgcgcaggat
cgtttccacgtcaccaccaccaccagcggcgccccgcgcgtgctggcgatgatggaggat
taccggcagaccgagtggcctgaactgaatgtctggctgacctccaccaccgaacaatgg
gcggtgatcgcagtgcagggcccgaaggcccgcgacatcatcgcgccgctgatcgagggt
gtggatctgaacgactttgcgcatatgagcgtcgccgacgccaccattgccggggtgcct
ggccgtctgttccgcgtcagcttcaccggtgagctgggctacgaactgaacgtcccggcg
gattacggccgtgcgatctgggaagcagtatatgagcgtggtcaggacttcggcatcgtg
ccgtacggcacggaaacaatgcatgtgctgcgtgccgaaaaaggctatgtgattgtcggt
caggaaaccgatggtactgccacaccggatgatgtcgggctggcctgggccattggcaag
gcgaagaaggatttcgtcggcaaacgctcgcttgagcgcacgtcgatgaaagacccgaat
cgcaagcagcttgtcgggctgttgacggatgatccggctatcgtgctggaagaaggcgcg
cagatcgtggccgatccggcgcatccgctgccgatgcccatgatcgggcacgtcaccagc
gcctatcgcagcgccacgctgggccgctccatcgcgctggcgatgatcaagggcggacgg
tccagaatcgggcagaccgtgtatattccgatgcccggtcgaaccatcgccgcgaaagtc
accgagtttgtgttctatgatccggaaggagtacggctcaatggctga
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