Citrifermentans bemidjiense: Gbem_1257
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Entry
Gbem_1257 CDS
T00749
Name
(GenBank) trans-isoprenyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00900
Terpenoid backbone biosynthesis
gbm01100
Metabolic pathways
gbm01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Gbem_1257
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
gbm01006
]
Gbem_1257
Enzymes [BR:
gbm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
Gbem_1257
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
Gbem_1257
2.5.1.29 geranylgeranyl diphosphate synthase
Gbem_1257
Prenyltransferases [BR:
gbm01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
Gbem_1257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
ACH38276
UniProt:
B5EI12
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All DBs
Position
1453419..1454306
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AA seq
295 aa
AA seq
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MDLKQYLKQKCELVDQALERFLPHGKELPASLHGSMRYSVFAGGKRVRPVLLLAACEAVG
GELNSALPAACAMEMIHTYSLIHDDLPAMDNDDFRRGNPTNHKVYGEATAILAGDALLTE
AFILLSCNGEGMEPGARLRVIHEIAHASGSRGMVGGQMVDMESEGKHDIDMATLSYIHTH
KTGALIRASVRAGAILGGANEETFDALTRYADAIGLAFQIADDVLDVEGTTEELGKDAGS
DQARGKATYPALVGLEASKRRAEELVQIALNALEPFDERAEPLRAIASYIVKRKS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaagcaatatttgaagcagaagtgtgagttggtcgaccaggcgctggagcgc
tttcttccccatgggaaggaactaccggcgtccctgcacggttccatgcgctactcggtg
tttgccggaggcaaaagggtgcgcccggtgctcttgctggccgcctgcgaggcggtgggg
ggggagcttaactccgccctgccggctgcctgcgccatggagatgatccacacctactcc
ctcatccacgacgacctccccgccatggacaacgacgacttccgccgggggaaccccacc
aaccacaaggtgtacggcgaggcgaccgccatcttagccggcgacgcgctcttaaccgag
gccttcatcctcctctcctgcaacggcgaagggatggagcctggggcgcgccttcgggtg
atccacgagatagcgcacgcttccggctcgcgcgggatggttggcgggcagatggtcgac
atggagagcgagggaaagcacgacatcgacatggctaccctctcctacatccatacccac
aagaccggtgccctgatccgggcttcggtgcgcgccggcgccatcctcggcggggcgaac
gaggagaccttcgacgccctcacccgttacgccgacgccatcggcctcgccttccagatc
gcggacgacgttctcgacgtggaggggaccaccgaggagttgggaaaggacgccgggagc
gaccaggcccgcggcaaggcgacctacccggcgctcgtcgggctggaggcgtccaaacgg
cgcgccgaagaactggtgcagatcgccttgaacgcgctggagccgttcgacgagcgggca
gaacctttgcgggccatagcttcgtacatagtgaaaaggaaatcgtag
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