Citrifermentans bemidjiense: Gbem_3085
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Entry
Gbem_3085 CDS
T00749
Symbol
vorB
Name
(GenBank) 2-oxoacid:ferredoxin oxidoreductase, thiamin diphosphate-binding subunit
KO
K00175
2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:
1.2.7.3
1.2.7.11
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00010
Glycolysis / Gluconeogenesis
gbm00020
Citrate cycle (TCA cycle)
gbm00620
Pyruvate metabolism
gbm00650
Butanoate metabolism
gbm01100
Metabolic pathways
gbm01110
Biosynthesis of secondary metabolites
gbm01120
Microbial metabolism in diverse environments
gbm01200
Carbon metabolism
gbm01210
2-Oxocarboxylic acid metabolism
Module
gbm_M00009
Citrate cycle (TCA cycle, Krebs cycle)
gbm_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Gbem_3085 (vorB)
00020 Citrate cycle (TCA cycle)
Gbem_3085 (vorB)
00620 Pyruvate metabolism
Gbem_3085 (vorB)
00650 Butanoate metabolism
Gbem_3085 (vorB)
Enzymes [BR:
gbm01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.3 2-oxoglutarate synthase
Gbem_3085 (vorB)
1.2.7.11 2-oxoacid oxidoreductase (ferredoxin)
Gbem_3085 (vorB)
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Motif
Pfam:
TPP_enzyme_C
NOB1_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
ACH40087
UniProt:
B5E8S3
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All DBs
Position
complement(3570580..3571320)
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AA seq
246 aa
AA seq
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MQQVFKRPQSLKDVQTHFCPGCHHGTIHRLVADAMDLHGVQERTIGVASVGCSVFLYGYF
DIDVVEAPHGRAPAVATGVKRAKPDNFVFTYQGDGDLAAIGTAEIIHAANRGEDITVIFV
NNTTYGMTGGQMAPTTLVGQKTSTSPYGRDKSKDGSPIRMAELMAQLGGVAYSARVAVDS
PKHVLEAKKVIREAFGYQVQGRGFSFVEVLSACPTNWGMNPLKANARVGEEMIPYFQLGV
FKKEEA
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggtttttaagagaccgcaaagcttgaaggacgtgcagacccatttctgcccc
gggtgccatcacggcaccatccaccgcctggtggcggacgccatggacctccacggcgtg
caggaaaggaccatcggggtggcgtcggtcggctgttccgtctttctctacggctacttc
gacatcgacgtcgtcgaggctccccacgggcgcgctcccgcggtagcgaccggcgtcaag
cgcgcgaagccggacaacttcgtcttcacctaccagggggacggcgaccttgccgccatc
gggaccgcggagatcatccatgccgccaaccggggcgaggacatcaccgtcatcttcgtc
aacaacacgacctacggcatgaccggcggccagatggccccgaccaccctggtcggtcag
aagacctccacctccccgtacggcagggacaagtccaaggacggctccccgatcaggatg
gcggaactgatggcgcagctgggcggggtggcctactcggcccgcgtggcggtggattct
cccaagcacgtcctggaggcgaagaaggtgatccgcgaggcgttcggctatcaggttcag
gggagggggttctccttcgtggaagtgctctccgcctgcccgaccaactgggggatgaac
ccgctcaaggcgaacgcgcgggtcggcgaggagatgatcccttacttccagttgggggtc
ttcaagaaggaagaggcgtag
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