Citrifermentans bemidjiense: Gbem_3350
Help
Entry
Gbem_3350 CDS
T00749
Symbol
trpA
Name
(GenBank) tryptophan synthase, alpha subunit
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
gbm
Citrifermentans bemidjiense
Pathway
gbm00260
Glycine, serine and threonine metabolism
gbm00400
Phenylalanine, tyrosine and tryptophan biosynthesis
gbm01100
Metabolic pathways
gbm01110
Biosynthesis of secondary metabolites
gbm01230
Biosynthesis of amino acids
Module
gbm_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
gbm00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Gbem_3350 (trpA)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
Gbem_3350 (trpA)
Enzymes [BR:
gbm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
Gbem_3350 (trpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
PcrB
His_biosynth
BtpA
Motif
Other DBs
NCBI-ProteinID:
ACH40345
UniProt:
B5EAK6
LinkDB
All DBs
Position
complement(3848588..3849391)
Genome browser
AA seq
267 aa
AA seq
DB search
MSRISDRFASLKERGEKALVTFVTAGDPDLATTEKVVLELERAGADLIELGVPFSDPMAD
GPTIQLSSDRALASGTTLPAILELVSRLREKTQVPIVLMGYFNPIFAYGSERFAFDAAQA
GVDALLVVDLPPEEAAELKGATDSCGLDLIFLLTPTSDGSRIASVARQGSGFIYYVSVTG
VTGARSAVADDLAARVTEVRGALELPLVVGFGISTPEQAGEVARAADGVVVGSALVKYFE
KYQGAELLEQLGGFVSALKQGVLKGSR
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggatttcagatagatttgccagcctgaaagaacgtggggaaaaggcgctggtc
accttcgtcaccgccggcgacccggatctggcgactacggaaaaggtggtgctcgaactc
gaacgggcaggggccgacctgatcgagctgggagttcccttctccgatcccatggctgac
ggcccgaccatccagctctcctcggaccgggccctggcctccggcaccactctcccggca
atactggagctggtatcgaggctcagggaaaagacccaggtccccatcgtgctgatgggt
tacttcaaccccatcttcgcctacggttccgagcgctttgccttcgacgcggcacaagcc
ggcgtcgacgccctgctggtggtggatctcccccccgaggaggctgcggagctaaaagga
gctaccgacagctgcggactcgacctcatcttcctcctcaccccgacctcagacggctcc
cggatcgcttctgtcgcgcgccagggaagcggcttcatctactacgtctccgtcaccggc
gtcaccggcgcgcgtagcgcggtcgccgatgacctggcggcccgggtcaccgaggtgcgc
ggcgcgctggaactgccgcttgtggtcggcttcggcatctccaccccggagcaggcgggg
gaggtggcccgggcggccgacggcgtggtggtgggaagcgcgctggtgaagtacttcgag
aagtaccagggggccgaactcctggaacagctggggggattcgtctcggcgctaaaacaa
ggagtgctgaagggctcccggtaa
DBGET
integrated database retrieval system
