Granulibacter bethesdensis CGDNIH4: GbCGDNIH4_0052
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Entry
GbCGDNIH4_0052 CDS
T03156
Name
(GenBank) Succinyl-CoA synthetase beta chain
KO
K14067
malate-CoA ligase subunit beta [EC:
6.2.1.9
]
Organism
gbs
Granulibacter bethesdensis CGDNIH4
Pathway
gbs00630
Glyoxylate and dicarboxylate metabolism
gbs00680
Methane metabolism
gbs01100
Metabolic pathways
gbs01120
Microbial metabolism in diverse environments
gbs01200
Carbon metabolism
Module
gbs_M00346
Formaldehyde assimilation, serine pathway
Brite
KEGG Orthology (KO) [BR:
gbs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GbCGDNIH4_0052
09102 Energy metabolism
00680 Methane metabolism
GbCGDNIH4_0052
Enzymes [BR:
gbs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.9 malate---CoA ligase
GbCGDNIH4_0052
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
Ligase_CoA_2
DUF6758
Motif
Other DBs
NCBI-ProteinID:
AHJ64413
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Position
55302..56471
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AA seq
389 aa
AA seq
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MDVHEYQAKELLASAGVAVPRGAIAFSADQAVYAATELGGWHWAVKAQIHAGARGKAGGI
KLCKTYHEVREAAAGMLGKRLVTHQTGPEGKPVQRVYVEVADPFEKEFYLGFVLDRKLER
VRVIASAEGGMEIEEIASKHPEKLIQVIVEPAVGLQQFQARQIAFKLGLSSRQVQRAVTS
IMGAYRAFRDHDATMLEINPLVLTKDDRILALDAKMSFDDNALFRRNNVANMHDPSQDDP
REAQAAEHNLNYVGLEGDIGCVVNGAGLAMATMDVIKYAGGEPANFLDVGGGASPERTAT
AFRLVLSDKNVKVVLVNIFAGINRCDWIAEGVVHAVKEVDLKLPLVVRLAGTNVEEGRRI
LKESGISVIMAESLTEAAEKAVEAAKAAA
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggacgtccatgagtaccaggcaaaagaattgcttgcgagcgccggcgtggccgtgccc
cgcggtgcaatcgctttcagcgctgatcaggccgtgtatgccgcgaccgaactgggtggc
tggcactgggcggtgaaagcccagattcatgccggtgcgcgcggcaaggccggcggcatc
aagctgtgcaagacctatcatgaagtgcgcgaggctgctgccggtatgctcggcaagcgt
ctggtcacgcatcagaccggcccggaaggcaagccggtccagcgcgtgtatgtcgaggtc
gccgatcccttcgagaaagaattctatctgggcttcgtgctggatcgtaagctggagcgc
gtgcgtgtgatcgcctccgccgagggcggcatggagatcgaggaaatcgcttccaagcat
ccggaaaagctgatccaggtgatcgtggagccggcggttggtcttcagcagttccaggcc
cgtcagatcgccttcaagctgggcctgtccagccgtcaggtacagcgtgcggtgaccagc
atcatgggcgcttatcgcgcattccgcgatcacgacgcgaccatgctggaaatcaatcct
ctggttctgaccaaggatgaccgtattctggcgctcgatgcgaagatgagcttcgacgac
aacgccttgttccgtcgcaacaacgtcgccaacatgcatgatccctctcaggacgatccg
cgtgaggcgcaggctgccgagcacaacctcaactatgtgggtctggaaggcgatatcggc
tgcgtggtgaatggcgccggcctggcgatggcgaccatggacgtcatcaaatatgcgggt
ggtgagcctgccaacttcctcgatgtcggcggcggggcaagccccgagcgtaccgcgacg
gcgttccgtctggtgctgtccgacaagaacgtgaaggttgttctggtcaacatcttcgcc
ggcatcaaccgctgcgactggatcgcggaaggcgtggtgcacgcggtgaaagaagtcgat
ctgaagcttccgctggtggtgcgtctggcaggcaccaatgtggaggaaggccgccgtatt
ctgaaagaaagcggcatttccgtcatcatggccgaaagcctgaccgaagcggccgaaaag
gccgtcgaggccgcgaaggccgcggcgtaa
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