KEGG   Geobacter benzoatilyticus: JZM60_13275
Entry
JZM60_13275       CDS       T07995                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
gbz  Geobacter benzoatilyticus
Pathway
gbz00740  Riboflavin metabolism
gbz01100  Metabolic pathways
gbz01110  Biosynthesis of secondary metabolites
gbz01240  Biosynthesis of cofactors
gbz02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:gbz00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    JZM60_13275 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    JZM60_13275 (ribD)
Enzymes [BR:gbz01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     JZM60_13275 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     JZM60_13275 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: QSV45103
LinkDB
Position
2877821..2878933
AA seq 370 aa
MVNSAEKFMRRALVLAKRGEGKTSPNPAVGCVIVRDGAIVGEGWHRRAGTPHAEVHALRQ
AGELARNADVYVTLEPCSHYGKTPPCADALVEAGVRRVFVGMVDPNPKVSGRGIQRLQSA
GIEVVTGILEAGCRRLNEPFVKHVTTGLPFVILKSAMTMDGKTATATGDSRWITNEKSRH
YVHRLRSKVDGIMVGVGTVIADDPQLTARIPSGRDPLRIVVDSSLRIPPDSRILRQESAA
TTVVATISKELNRIACLQYPGVEILQCNEDDGTVDLRDLLARLGSRGVQSVLIEGGSTLA
GRALRAGLIDKFVLFYAPKFLGGADGFGLFSGPASRMMAECRRLKDVTVRRFGDDVMIEA
YPEEECLPVS
NT seq 1113 nt   +upstreamnt  +downstreamnt
atggttaattctgctgaaaagttcatgcggcgtgccttggtgctggcaaaaaggggcgag
gggaagacctctcccaatcctgctgtcggatgcgtcatcgtgagagatggggccattgtc
ggtgaaggatggcaccgccgtgccgggaccccccatgctgaggtccatgccctgcggcag
gccggtgaattggcccgcaatgccgatgtttatgtgactcttgaaccttgctcccattac
ggtaaaacgcccccctgcgccgatgcccttgttgaggcgggggtacgccgggtttttgtc
gggatggtcgacccgaaccccaaagtatccgggcgtggcattcagcggcttcagtcagcg
ggcatcgaggttgtcaccggtatattggaagcagggtgccgcaggcttaatgagccattc
gtgaagcatgtgacgaccggccttccgtttgttattctcaaatcggccatgaccatggat
ggcaagacagcaaccgcaacgggcgactcccgctggataaccaacgaaaaatcgcgtcat
tatgttcatcggcttcgatcaaaggttgatgggataatggtgggggtaggaacagttatt
gcggatgatccccagttgacggctcgaattcccagtggccgggatcccctcagaattgtt
gtggacagttccctcaggataccgcccgattcccggatactccgtcaggaatcagcggca
acaaccgtcgtggcaaccatctcaaaagagttgaaccggatcgcctgcctgcaatacccc
ggagtggagattcttcaatgcaacgaggacgatggaaccgttgacctgcgcgaccttctc
gcccgcctcggttcccggggggtgcaatcggtactcattgaaggggggagcactcttgcg
ggaagagcgctgcgggcaggtcttatcgacaagttcgtcctgttctatgcgccaaagttc
cttgggggggctgatggtttcgggcttttttcggggcctgcgagcaggatgatggctgaa
tgccggcggttgaaagatgtgacggtgcgtcgcttcggcgatgatgtgatgatagaagcc
tatccggaggaagaatgtttaccggtctcatag

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