Gymnogyps californianus (California condor): 127015630
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Entry
127015630 CDS
T08687
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
gcl
Gymnogyps californianus (California condor)
Pathway
gcl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gcl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127015630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gcl03021
]
127015630
Enzymes [BR:
gcl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127015630
Transcription machinery [BR:
gcl03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
127015630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Pox_C7_F8A
HMG_box
Motif
Other DBs
NCBI-GeneID:
127015630
NCBI-ProteinID:
XP_050751640
LinkDB
All DBs
Position
4:6771901..6808150
Genome browser
AA seq
1708 aa
AA seq
DB search
MRPPKVVPWRRLVGVSFGMYTAEEIRKLSVKPITNPQYLDNVGNPAINGLYDLALGPPDS
KEVCATCMQNFSNCPGHFGHIELPLTVYNPLFFDKLYLLIRGSCLNCHMLTCTRAVVHLL
LSQLKVLEKGLLHAVHDLEVVLNRFLEQCADATGSEIEEELNHHVQEILQSYQIRDQCSN
VKNVCECRNKLIAQFWKAHMSSKKCPNCKSRRSLVRKEHNSKLTVTYPSTVYRKSGEEGI
LDEPAAIDESQLGKRGYLTPMTAKEYILALWKNEGFFLRYLFPGMDPHESSGFSPDMFFL
DLLVVPPSRYRPVNRVGDRLFTNGQTVNLQAVMKDAKMIRKLLVFMAKEQCQPIKIAEEI
QTETGEDNEALDHSVLTMIPGQTIADKLYNAWIRLQSHVNIVFDSDMDKLMTEKYPGIRQ
LLEKKEGLFRKHMMGKRVDFAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKE
LRQAVINGPKVHPGASMVINEDGSRTVLSASSLTQREAIAKQLLTPSSGAPQSGLKIVCR
HIKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYTLAFTDEQYLVPKDGKPLPGLIQDHMISGVSMTIRGCFFTREQYMELVYRG
LTDKKGRIKIFPPAIMKPQRLWTGKQVVSTLLINIIPENHVPLNLTGKAKIGGKAWVKGP
ANRCLNLDSMCESQVIIRNGELLCGVLDKAHFGSSAYGLVHCCYEIYGGKTSGKVLTCLG
RLFTAYLQLYRGFTMGIEDILVKPEADHKRQKIIEKSSQHGIEAVRAALNLPETASREEV
QGKWQDAHLCKDQRDFNMVDLKFKEEVNNYNNEVNKVCMPLGLHRSFPENNLQLMVQSGA
KGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPSSGGFVTGRFLTGIKPS
EFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYGED
GLDIPKTQFLQPEQFPFIAENYEVIQKTHHLDEALARMESHQTNQQFKAIKKWRARHQNS
VQREGGFLMFSQKKMASVKAQIPGGEIKNGRDPATLQLLKMWYELDEKKRRKYLKKTNKC
PDPSLGVWRPDTYFASVSETFENGVEDYINKWESENRRSYRRPALSSDRLKDLLYLKWQR
SLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIKTP
TMSVPVFNTKKALKKVKQLKKQLTRVCLAEVLQKVEIEESLRVKCKQNKHRLYKIKFHFL
PHEYYREEKCVKPREILHFMETRFFKIFLEAIKRKNAKMASFTEVSTRKATRKDIDGDQD
KTQNNQEAPAEEEENIVDAEADEGDGDATEAKRRKNQEEEVDYESEEENGEENVDERLED
EEAESEKEEGTPGAEEDQNGADGDESQHLSFMSQTKKEKDPLLQSAELRVNAVLDSHSSI
QDYTFDTKNELWCEVSLTLPLMKVYFDISSLLVSLTRSTVIHEVKGITRCLLNESTNKQG
EKELILHTEGINLAELFRYSDILDLNRLYSNDIHAMAKNYGIESALRVIIKEIKDVFAVY
GIVVDPRHLSLVADYMCFEGFYKPLNRFGIQSNSSPLQQMTFETSYKFLKEATMMGAHDE
LRSPSACLVVGKVVKGGTGLFDLKQPLT
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgccgaaagtggtgccgtggcggcggctggttggggtctccttcgggatgtac
acggccgaggagatcaggaaactgagtgtaaaacccataacaaatcctcagtatttggat
aatgtggggaatccagccattaatggactgtacgacttggctttgggacctccagactcg
aaagaagtgtgtgcaacttgcatgcagaacttcagcaactgccctggtcattttggccat
atagaactgcctctgactgtctacaaccctctgttttttgataaattataccttctaatt
cgaggttcttgtttaaattgtcacatgctgacatgtactcgagctgtggttcacttactg
ctaagtcagctgaaggttctggagaaagggttgcttcatgctgtccatgatcttgaagtc
gttctgaacaggtttttagagcaatgtgcagatgcaacaggttcagaaattgaagaagag
ttaaatcaccacgttcaggaaatattacaaagttatcaaataagagatcagtgttcaaat
gtcaaaaatgtatgcgagtgtagaaataaactgatagcacagttctggaaagcacatatg
agttcaaagaaatgtccaaactgcaaatctaggagatcactagtgcgaaaagagcataac
agcaagctgacagtaacatacccttctacagtgtaccgtaagtcaggagaggaaggcatt
ctggatgagccagcagctattgatgaaagccagttagggaagagaggatacctgacacca
atgactgctaaggaatacatcctggctctgtggaagaatgaaggtttctttttgcgttat
ctcttccctgggatggatccccatgagagttcgggattcagtccagacatgtttttttta
gatctacttgtggttccgccttcaaggtatcgtcccgtaaatcgtgttggagaccgactg
tttacaaatggtcagactgtgaacttgcaggctgtcatgaaagatgccaaaatgatacgg
aagctcttggttttcatggcaaaagaacaatgtcagccaataaaaattgcagaagaaatc
caaacagagacaggagaggataatgaagctctggaccattctgtcctgacaatgattcca
ggacagaccattgcagataagctgtacaatgcttggattcgtcttcagagccatgtcaac
attgtatttgatagtgacatggacaaactaatgacagaaaaataccctggtattcgtcag
ctattagagaaaaaggaaggactgttccgcaagcacatgatgggaaagcgtgtggatttt
gctgctcgatcagtcatttgccctgatatgtacattggtaccaatgagattggcattcct
atggtatttgctaccaaactgacttatcctcagccagtcactccctggaatgtcaaagag
ctgaggcaggctgtcataaatggcccaaaggttcaccctggggcctccatggtcattaat
gaagatggatctcgtacagtgttgagtgcgagcagcctgacccagagggaagccatagct
aagcagctccttactccttcttcaggtgcacctcagtcaggactgaagattgtatgtcga
catattaaaaatggagatgtccttctactgaaccgccagcccacccttcatagaccctcc
atccaagctcaccgagctcgaatcctgcctggagaaaaagtgctgaggcttcactatgcc
aactgcaaggcttacaatgctgattttgacggtgatgaaatgaacgcccattttccacag
agcgagctgggtagagcagaagcctacaccttagcgtttactgatgaacagtatctggtt
ccaaaggatgggaagccacttcctggcttgatccaggatcacatgatttctggagtcagc
atgacaatccggggctgctttttcaccagagagcaatatatggagcttgtttaccgagga
ctaacagacaaaaaaggaagaattaaaatctttcctcctgccattatgaaaccacaacga
ttatggacaggaaagcaggttgtttctacattgttaataaacatcattccagaaaaccac
gtcccactgaatttgactgggaaggctaagattggtggaaaagcctgggtaaagggacct
gcaaacagatgtctaaatcttgattcaatgtgtgaatctcaggttattattagaaatgga
gaattactgtgtggagtcttggacaaagctcactttggcagctctgcctatggcctggtc
cactgttgctatgaaatctatgggggcaaaaccagtgggaaagtgctcacatgtctagga
cggctctttactgcttatctgcagctgtacaggggatttacaatggggattgaagatatt
ttggttaaacctgaagcagaccacaaaagacagaaaatcattgaaaagtcaagccagcat
ggtattgaagctgttagagctgctcttaatttgccagaaacagcatcacgtgaggaagtc
caagggaaatggcaggatgcccatctctgcaaagaccagagggattttaacatggttgat
ctgaaattcaaggaggaagtaaacaattacaacaatgaagttaacaaggtttgtatgccc
cttggtctccacaggagctttccagagaacaatttgcagctgatggtacagtcaggagcc
aaaggatccactgtaaatacaatgcagatttcttgtttgctgggccagattgagttggaa
ggtcgaagacccccactgatggcatctggcaaatcgctgccatgtttccagccttacgat
ttttctccgagctcaggaggatttgtgactggcagatttctcactgggatcaaaccttct
gaattcttctttcactgcatggctggcagggaaggtctcgtggatacagctgtcaaaacc
agccgttctgggtacctacaaaggtgtatcataaaacatttggaaggactggtagttcag
tatgacctgactgtacgagatagtgatggcagtgtggtgcagtttctgtatggagaagat
gggcttgatatccctaaaactcagttcttacagcctgagcagtttcctttcattgcagaa
aactatgaggtaatccagaagacacaccatctggatgaagctttagcaaggatggagtct
caccaaactaaccagcagttcaaagccatcaagaagtggcgagccaggcaccaaaactct
gtgcaaagagaaggaggttttctgatgttttcccaaaagaaaatggcaagtgtaaaagca
cagattccaggaggagaaataaaaaatggaagagatcctgctactttacagttattgaag
atgtggtatgaactagatgagaagaaacgaagaaaatatctgaagaagacaaataagtgt
cctgacccaagccttggtgtttggcgtccagatacttattttgcatctgtttcagaaaca
tttgaaaatggagtcgaagattatatcaacaaatgggaatctgagaacagacgaagttat
aggcgcccagcgctttcttctgatagattaaaggatttgttgtatttaaagtggcagcga
tctctttgtgacccaggagaagctgtgggtcttcttgcagctcagagtattggggaacct
tccacacagatgactctgaacaccttccactttgctggcagaggtgaaatgaatgtcaca
ctgggtattccaaggttgcgggagatattgatggtggccagtgcaaatattaaaacgcca
acgatgagtgttcctgtattcaataccaagaaagctctcaagaaggtgaaacagcttaag
aaacagctcacaagagtgtgcttagctgaggtcttgcagaaagttgagatagaggaatcc
ctgcgtgtgaagtgcaagcagaacaaacatcgcctctacaaaatcaaattccatttcttg
ccccatgaatattaccgagaggagaagtgtgtgaagcccagggagatcttgcacttcatg
gaaacaaggttcttcaaaatttttctggaagcaattaaaaggaagaatgcaaagatggca
tcttttactgaagtcagcacccggaaggcaactcggaaagatatagatggtgaccaagac
aagacacagaataatcaggaagctccagcagaggaagaagagaacattgttgatgcagaa
gctgatgaaggggatggtgatgctacagaagcaaaacggaggaagaaccaggaagaagag
gttgattatgagagtgaagaagagaatggggaagaaaacgttgacgagcgtctagaagat
gaagaggctgaatcagaaaaagaagaagggactcctggtgctgaagaagatcagaacgga
gcagatggtgatgaatctcaacatctttcctttatgtctcagactaaaaaagagaaagat
ccgttacttcagtcagcagagttgcgagtaaatgctgttctggacagccactcatcaata
caggattacacatttgacaccaaaaatgaactttggtgtgaggtttcattgacacttcca
ttgatgaaggtgtactttgatatctcctccttgcttgtctctctcacacgaagcacagtc
attcatgaagtgaaggggatcacacgatgcttgttgaatgaaagtaccaataagcaagga
gagaaggaactcattctgcataccgaagggataaaccttgcggagctgttcagatactct
gatattttggacctgaacagactttattccaatgatattcatgccatggctaagaattat
ggaattgaatctgctctgagggtgattataaaggaaataaaagatgtatttgctgtatat
ggaattgtggtagaccctcggcacctttcacttgtggcagattacatgtgttttgaagga
ttttataaaccactgaatcgttttggaattcagtccaactcctcccctctgcaacagatg
acatttgaaaccagctacaaattcttgaaggaagcaacaatgatgggtgcccatgatgaa
ctgcgatccccttctgcgtgcctagtggttggaaaagttgttaaaggagggactggtttg
tttgacctcaagcaaccccttacatag
DBGET
integrated database retrieval system
