Gracilibacillus caseinilyticus: MUN88_09310
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Entry
MUN88_09310 CDS
T09432
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
gcs
Gracilibacillus caseinilyticus
Pathway
gcs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gcs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MUN88_09310 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gcs03021
]
MUN88_09310 (rpoE)
03400 DNA repair and recombination proteins [BR:
gcs03400
]
MUN88_09310 (rpoE)
Transcription machinery [BR:
gcs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MUN88_09310 (rpoE)
DNA repair and recombination proteins [BR:
gcs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MUN88_09310 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DFP
Drc1-Sld2
BUD22
Motif
Other DBs
NCBI-ProteinID:
UOQ50229
LinkDB
All DBs
Position
1956739..1957293
Genome browser
AA seq
184 aa
AA seq
DB search
MSLKDLTKERAEELAMIDIATLILEEENKALNFREVFDRVAKIKGLTEAQMDMSISQFYT
DLNIDGRFMTKGSNLWGLKRWYPVEEIDEDITPVPKKKKKKKAAKKKKKKAPVEELDETE
DLDESIDQTKDNDIVGFDDEDLDAVEDLSADDDDFDFDDDEDLDDDIDEDFDDDEEDDEE
ESSK
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtgagtttaaaggacttaacaaaagaacgtgcagaagaattggcaatgattgatattgca
acattgatattagaagaagaaaataaagcattgaatttccgtgaggtttttgaccgtgtg
gcgaagatcaaaggattaacagaagcacagatggatatgtcaatctcacaattttatacg
gatttaaatatagatggacgttttatgactaagggctcgaacctttggggcttaaagaga
tggtatccagtcgaagaaattgacgaagatattacaccagttccgaagaagaagaaaaag
aaaaaggcagccaagaagaagaagaagaaagcaccagtggaagaattggatgaaacagag
gatttggatgaatccattgaccaaacaaaggataatgatatcgtaggcttcgatgatgaa
gacctggatgccgtggaagatctttcagctgatgacgatgacttcgattttgatgatgat
gaagatctggacgatgatatcgatgaagattttgatgatgatgaggaagacgacgaagaa
gagagcagtaaataa
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