Gluconacetobacter diazotrophicus PA1 5 (Brazil): GDI2131
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Entry
GDI2131 CDS
T00631
Symbol
dapE
Name
(GenBank) putative succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
gdi
Gluconacetobacter diazotrophicus PA1 5 (Brazil)
Pathway
gdi00300
Lysine biosynthesis
gdi01100
Metabolic pathways
gdi01120
Microbial metabolism in diverse environments
gdi01230
Biosynthesis of amino acids
Module
gdi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gdi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GDI2131 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gdi01002
]
GDI2131 (dapE)
Enzymes [BR:
gdi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
GDI2131 (dapE)
Peptidases and inhibitors [BR:
gdi01002
]
Metallo peptidases
Family M20
GDI2131 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
CAP56074
RhizoBase:
GDI2131
UniProt:
A9HKR2
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All DBs
Position
complement(2185227..2186384)
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AA seq
385 aa
AA seq
DB search
MTGALTPASTPALTLARDLIRAPSVTPDDGGAIGVLTAALRGLGFDVTDLPFGEGPARTP
NLFARLGRSGPHLCFAGHTDVVPPGDGGWTSGPFEAALRDGCLYGRGACDMKGGIAAFVG
AVARILESGRTLRGSVSLLITGDEEGPATFGTVKVLEWMAAHGQVPDFCVVGEPTNPDHL
GDVIKIGRRGSLNARIVVPGIQGHVAYPHRADNPVHRLLAILSDLTARPLDQGTEWFEPS
SLQVTTVDVGNEATNVIPGRATARLNIRFNDLHTGQGLADWIRGVAHVHAPGAEVTVQIS
GEAFRTEPTPELDMLAASIQAVTGRAPRLDTGGGTSDARFISRYCPVAEFGLVGASMHKV
DEHVPVADLLALTDIYAAFLERLMG
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
ttgactggtgccctgaccccggcatccacccccgcgctcaccctggcgcgggacctgatc
cgcgcgccgtcggtcacgccggacgatggcggcgcgatcggggtgctgacggctgccctg
cgcgggctggggttcgacgtcaccgacctaccgtttggcgagggacctgcccgtaccccg
aacctgttcgcgcggctgggccggtcggggccgcatctctgcttcgccggacataccgac
gtggtgccgcccggcgatggcggctggacctcgggcccgttcgaggccgcgctgcgggac
ggctgcctgtacgggcgcggcgcatgcgacatgaagggcgggatcgccgccttcgtcggc
gccgtggcacggatactggaatcgggccggacgctgcggggttcggtcagcctgctgatt
accggcgacgaggaaggaccggccaccttcggcaccgtcaaggtgctggaatggatggcg
gcgcacgggcaggttcccgatttctgcgtggtgggcgaaccgaccaatcccgaccatctg
ggcgatgtcatcaagatcgggcgtcgcggcagcctgaatgcccggatcgtcgtgccggga
atccagggtcacgtggcctatccccatcgggccgacaatccggtccatcgcctgctggcc
atcctgtcggacctgacggcccgcccgctggaccagggaacggagtggttcgaaccgtcc
agcctgcaggtcaccacggtcgatgtcggcaacgaggcgaccaatgtcattcccggccgg
gccacggcacggctgaacatccgcttcaacgacctgcataccggccagggcctggccgac
tggatccgcggcgtcgcgcatgtccacgccccgggggcggaggtcacggtccagatcagc
ggtgaagccttccgtaccgaacccacgccggagctggacatgctggccgcgtccatccag
gcggtgacggggcgggcgccgcggctggataccgggggcggcacgtccgatgcacggttc
atcagccgctattgcccggttgccgaattcggcctggtcggggccagcatgcacaaggtg
gacgagcacgtgcccgttgccgaccttctcgcgctgaccgacatctatgcggcgtttctt
gaaaggctgatgggatga
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